RNA–Protein interactions for RNA: ENST00000368409.7

EFNA4-202, Transcript of ephrin A4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFNA4, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4-202ENST00000368409 RRS1Q15050 365 aaKnown RBP22.99■■□□□ 1.27
EFNA4-202ENST00000368409 ZNF827Q17R98 1081 aa22.99■■□□□ 1.27
EFNA4-202ENST00000368409 GGNBP2Q9H3C7 697 aa22.99■■□□□ 1.27
EFNA4-202ENST00000368409 SMG6Q86US8 1419 aaKnown RBP22.99■■□□□ 1.27
EFNA4-202ENST00000368409 CHD4Q14839 1912 aa22.98■■□□□ 1.27
EFNA4-202ENST00000368409 YY1P25490 414 aa22.97■■□□□ 1.27
EFNA4-202ENST00000368409 CDCA8Q53HL2 280 aa22.97■■□□□ 1.27
EFNA4-202ENST00000368409 SLC27A3Q5K4L6 730 aa22.97■■□□□ 1.27
EFNA4-202ENST00000368409 DCAF8L1A6NGE4 600 aa22.96■■□□□ 1.27
EFNA4-202ENST00000368409 ZCRB1Q8TBF4 217 aaKnown RBP22.96■■□□□ 1.27
EFNA4-202ENST00000368409 KIF24Q5T7B8 1368 aa22.96■■□□□ 1.27
EFNA4-202ENST00000368409 PKD1L3Q7Z443 1732 aa22.96■■□□□ 1.27
EFNA4-202ENST00000368409 INSRP06213 1382 aa22.95■■□□□ 1.26
EFNA4-202ENST00000368409 NBPF6Q5VWK0 638 aa22.95■■□□□ 1.26
EFNA4-202ENST00000368409 AKT1S1Q96B36 256 aa22.95■■□□□ 1.26
EFNA4-202ENST00000368409 NBPF4Q96M43 638 aa22.95■■□□□ 1.26
EFNA4-202ENST00000368409 MAP2P11137 1827 aaKnown RBP22.94■■□□□ 1.26
EFNA4-202ENST00000368409 FLT4P35916 1363 aa22.94■■□□□ 1.26
EFNA4-202ENST00000368409 CGNL1Q0VF96 1302 aa22.94■■□□□ 1.26
EFNA4-202ENST00000368409 ITGB4P16144 1822 aa22.94■■□□□ 1.26
EFNA4-202ENST00000368409 PRIM1P49642 420 aaKnown RBP22.93■■□□□ 1.26
EFNA4-202ENST00000368409 FHDC1Q9C0D6 1143 aaPredicted RBP22.93■■□□□ 1.26
EFNA4-202ENST00000368409 TAF1LQ8IZX4 1826 aa22.93■■□□□ 1.26
EFNA4-202ENST00000368409 TOGARAM1Q9Y4F4 1720 aa22.93■■□□□ 1.26
EFNA4-202ENST00000368409 C5P01031 1676 aa22.93■■□□□ 1.26
EFNA4-202ENST00000368409 NSD3Q9BZ95 1437 aa22.92■■□□□ 1.26
EFNA4-202ENST00000368409 MAP3K5Q99683 1374 aa22.92■■□□□ 1.26
EFNA4-202ENST00000368409 USHBP1Q8N6Y0 703 aa22.91■■□□□ 1.26
EFNA4-202ENST00000368409 SYTL4Q96C24 671 aaPredicted RBP22.91■■□□□ 1.26
EFNA4-202ENST00000368409 SYT17Q9BSW7 474 aa22.91■■□□□ 1.26
EFNA4-202ENST00000368409 CARD14Q9BXL6 1004 aa22.91■■□□□ 1.26
EFNA4-202ENST00000368409 TIMELESSQ9UNS1 1208 aa22.91■■□□□ 1.26
EFNA4-202ENST00000368409 HSP90AB2PQ58FF8 381 aa22.9■■□□□ 1.26
EFNA4-202ENST00000368409 PNPLA7Q6ZV29 1317 aa22.89■■□□□ 1.26
EFNA4-202ENST00000368409 RAPGEF4Q8WZA2 1011 aa22.89■■□□□ 1.25
EFNA4-202ENST00000368409 ARXQ96QS3 562 aa22.89■■□□□ 1.25
EFNA4-202ENST00000368409 NCAPD2Q15021 1401 aa22.89■■□□□ 1.25
EFNA4-202ENST00000368409 CLSPNQ9HAW4 1339 aa22.87■■□□□ 1.25
EFNA4-202ENST00000368409 SLC16A10Q8TF71 515 aa22.87■■□□□ 1.25
EFNA4-202ENST00000368409 TATP17735 454 aaPredicted RBP22.86■■□□□ 1.25
EFNA4-202ENST00000368409 KCNQ4P56696 695 aa22.86■■□□□ 1.25
EFNA4-202ENST00000368409 PCDH11XQ9BZA7 1347 aa22.85■■□□□ 1.25
EFNA4-202ENST00000368409 PCDH11YQ9BZA8 1340 aa22.85■■□□□ 1.25
EFNA4-202ENST00000368409 EMILIN1Q9Y6C2 1016 aa22.84■■□□□ 1.25
EFNA4-202ENST00000368409 TFCP2L1Q9NZI6 479 aa22.83■■□□□ 1.25
EFNA4-202ENST00000368409 CCNL1Q9UK58 526 aaPredicted RBP22.83■■□□□ 1.25
EFNA4-202ENST00000368409 UBR3Q6ZT12 1888 aa22.79■■□□□ 1.24
EFNA4-202ENST00000368409 CYP27B1O15528 508 aa22.79■■□□□ 1.24
EFNA4-202ENST00000368409 C4BP0C0L5 1744 aa22.79■■□□□ 1.24
EFNA4-202ENST00000368409 POLD1P28340 1107 aa22.78■■□□□ 1.24
EFNA4-202ENST00000368409 WASHC2AQ641Q2 1341 aa22.78■■□□□ 1.24
EFNA4-202ENST00000368409 PALLDQ8WX93 1383 aa22.76■■□□□ 1.23
EFNA4-202ENST00000368409 PPM1GO15355 546 aaPredicted RBP22.74■■□□□ 1.23
EFNA4-202ENST00000368409 COL23A1Q86Y22 540 aaPredicted RBP22.73■■□□□ 1.23
EFNA4-202ENST00000368409 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
EFNA4-202ENST00000368409 NKX1-1Q15270 411 aaPredicted RBP22.72■■□□□ 1.23
EFNA4-202ENST00000368409 MPRIPQ6WCQ1 1025 aa22.72■■□□□ 1.23
EFNA4-202ENST00000368409 ZNF784Q8NCA9 323 aaPredicted RBP22.72■■□□□ 1.23
EFNA4-202ENST00000368409 POLKQ9UBT6 870 aa22.72■■□□□ 1.23
EFNA4-202ENST00000368409 EYA1Q99502 592 aa22.71■■□□□ 1.23
EFNA4-202ENST00000368409 PLEKHG2Q9H7P9 1386 aa22.71■■□□□ 1.23
EFNA4-202ENST00000368409 KLHL34Q8N239 644 aa22.7■■□□□ 1.22
EFNA4-202ENST00000368409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.7■■□□□ 1.22
EFNA4-202ENST00000368409 SPG7Q9UQ90 795 aa22.7■■□□□ 1.22
EFNA4-202ENST00000368409 HMGB2P26583 209 aaKnown RBP22.69■■□□□ 1.22
EFNA4-202ENST00000368409 SMARCC1Q92922 1105 aaPredicted RBP22.69■■□□□ 1.22
EFNA4-202ENST00000368409 MSH5O43196 834 aa22.68■■□□□ 1.22
EFNA4-202ENST00000368409 GPR162Q16538 588 aa22.68■■□□□ 1.22
EFNA4-202ENST00000368409 NLGN2Q8NFZ4 835 aa22.68■■□□□ 1.22
EFNA4-202ENST00000368409 PIGBQ92521 554 aa22.68■■□□□ 1.22
EFNA4-202ENST00000368409 ZNF831Q5JPB2 1677 aa22.67■■□□□ 1.22
EFNA4-202ENST00000368409 EIF4G2P78344 907 aaKnown RBP eCLIP22.66■■□□□ 1.22
EFNA4-202ENST00000368409 FLAD1Q8NFF5 587 aa22.66■■□□□ 1.22
EFNA4-202ENST00000368409 POLR3GLQ9BT43 218 aa22.66■■□□□ 1.22
EFNA4-202ENST00000368409 HSPA5P11021 654 aaKnown RBP22.65■■□□□ 1.22
EFNA4-202ENST00000368409 EIF4A2Q14240 407 aaKnown RBP22.65■■□□□ 1.22
EFNA4-202ENST00000368409 MSL1Q68DK7 614 aa22.65■■□□□ 1.22
EFNA4-202ENST00000368409 IGSF1Q8N6C5 1336 aa22.63■■□□□ 1.21
EFNA4-202ENST00000368409 COL5A3P25940 1745 aaPredicted RBP22.63■■□□□ 1.21
EFNA4-202ENST00000368409 PHKG2P15735 406 aa22.63■■□□□ 1.21
EFNA4-202ENST00000368409 TNNT2P45379 298 aaPredicted RBP22.63■■□□□ 1.21
EFNA4-202ENST00000368409 AMIGO3Q86WK7 504 aa22.63■■□□□ 1.21
EFNA4-202ENST00000368409 IFNL2Q8IZJ0 200 aa22.62■■□□□ 1.21
EFNA4-202ENST00000368409 AK7Q96M32 723 aa22.62■■□□□ 1.21
EFNA4-202ENST00000368409 TMOD3Q9NYL9 352 aa22.62■■□□□ 1.21
EFNA4-202ENST00000368409 CEP350Q5VT06 3117 aa22.61■■□□□ 1.21
EFNA4-202ENST00000368409 PANK3Q9H999 370 aa22.61■■□□□ 1.21
EFNA4-202ENST00000368409 LOC102724428A0A0B4J2F2 783 aa22.6■■□□□ 1.21
EFNA4-202ENST00000368409 SIK1P57059 783 aa22.6■■□□□ 1.21
EFNA4-202ENST00000368409 PELP1Q8IZL8 1130 aaKnown RBP22.6■■□□□ 1.21
EFNA4-202ENST00000368409 YBX3P16989 372 aaKnown RBP eCLIP22.58■■□□□ 1.21
EFNA4-202ENST00000368409 LINC00116Q8NCU8 138 aa22.58■■□□□ 1.21
EFNA4-202ENST00000368409 ASAP1Q9ULH1 1129 aa22.58■■□□□ 1.21
EFNA4-202ENST00000368409 KDRP35968 1356 aa22.58■■□□□ 1.21
EFNA4-202ENST00000368409 KIF13BQ9NQT8 1826 aa22.57■■□□□ 1.2
EFNA4-202ENST00000368409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.57■■□□□ 1.2
EFNA4-202ENST00000368409 SSFA2P28290 1259 aa22.57■■□□□ 1.2
EFNA4-202ENST00000368409 CD2APQ9Y5K6 639 aa22.57■■□□□ 1.2
EFNA4-202ENST00000368409 VIRMAQ69YN4 1812 aaKnown RBP22.57■■□□□ 1.2
EFNA4-202ENST00000368409 ITPK1Q13572 414 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms