RNA–Protein interactions for RNA: ENST00000368408.3

EFNA3-201, Transcript of ephrin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3-201ENST00000368408 ARHGEF25Q86VW2 580 aa33.4■■■□□ 2.94
EFNA3-201ENST00000368408 C8orf58Q8NAV2 365 aa33.4■■■□□ 2.94
EFNA3-201ENST00000368408 LRRC37A3O60309 1634 aa33.4■■■□□ 2.94
EFNA3-201ENST00000368408 HAP1P54257 671 aaPredicted RBP33.39■■■□□ 2.94
EFNA3-201ENST00000368408 CADPS2Q86UW7 1296 aa33.39■■■□□ 2.94
EFNA3-201ENST00000368408 DDX19BQ9UMR2 479 aa33.39■■■□□ 2.94
EFNA3-201ENST00000368408 RTF1Q92541 710 aaKnown RBP33.37■■■□□ 2.93
EFNA3-201ENST00000368408 NCAPD2Q15021 1401 aa33.36■■■□□ 2.93
EFNA3-201ENST00000368408 XPCQ01831 940 aaPredicted RBP33.36■■■□□ 2.93
EFNA3-201ENST00000368408 PCDHB15Q9Y5E8 787 aa33.36■■■□□ 2.93
EFNA3-201ENST00000368408 XIRP1Q702N8 1843 aaKnown RBP33.34■■■□□ 2.93
EFNA3-201ENST00000368408 LTBP4Q8N2S1 1624 aa33.34■■■□□ 2.93
EFNA3-201ENST00000368408 MSH6P52701 1360 aa33.33■■■□□ 2.93
EFNA3-201ENST00000368408 LTV1Q96GA3 475 aaPredicted RBP33.33■■■□□ 2.93
EFNA3-201ENST00000368408 TMEM57Q8N5G2 664 aa33.32■■■□□ 2.92
EFNA3-201ENST00000368408 GNAT3A8MTJ3 354 aa33.31■■■□□ 2.92
EFNA3-201ENST00000368408 MAP3K5Q99683 1374 aa33.3■■■□□ 2.92
EFNA3-201ENST00000368408 PDE4AP27815 886 aa33.3■■■□□ 2.92
EFNA3-201ENST00000368408 BACH2Q9BYV9 841 aa33.3■■■□□ 2.92
EFNA3-201ENST00000368408 CAMTA1Q9Y6Y1 1673 aa33.3■■■□□ 2.92
EFNA3-201ENST00000368408 NBPF6Q5VWK0 638 aa33.29■■■□□ 2.92
EFNA3-201ENST00000368408 NBPF4Q96M43 638 aa33.29■■■□□ 2.92
EFNA3-201ENST00000368408 RWDD1Q9H446 243 aaPredicted RBP33.29■■■□□ 2.92
EFNA3-201ENST00000368408 MED1Q15648 1581 aaPredicted RBP33.29■■■□□ 2.92
EFNA3-201ENST00000368408 ELL2O00472 640 aaPredicted RBP33.29■■■□□ 2.92
EFNA3-201ENST00000368408 ITPRIPQ8IWB1 547 aa33.29■■■□□ 2.92
EFNA3-201ENST00000368408 BABAM1Q9NWV8 329 aa33.29■■■□□ 2.92
EFNA3-201ENST00000368408 NPHP3Q7Z494 1330 aa33.28■■■□□ 2.92
EFNA3-201ENST00000368408 SKAP1Q86WV1 359 aa33.27■■■□□ 2.92
EFNA3-201ENST00000368408 ZBTB40Q9NUA8 1239 aa33.27■■■□□ 2.92
EFNA3-201ENST00000368408 ABCC4O15439 1325 aa33.27■■■□□ 2.92
EFNA3-201ENST00000368408 CHMP4BQ9H444 224 aaKnown RBP33.25■■■□□ 2.91
EFNA3-201ENST00000368408 PXDNQ92626 1479 aa33.24■■■□□ 2.91
EFNA3-201ENST00000368408 API5Q9BZZ5 524 aaKnown RBP33.24■■■□□ 2.91
EFNA3-201ENST00000368408 HDAC1Q13547 482 aaPredicted RBP33.24■■■□□ 2.91
EFNA3-201ENST00000368408 LMOD2Q6P5Q4 547 aa33.24■■■□□ 2.91
EFNA3-201ENST00000368408 RGPD2P0DJD1 1756 aa33.23■■■□□ 2.91
EFNA3-201ENST00000368408 USHBP1Q8N6Y0 703 aa33.22■■■□□ 2.91
EFNA3-201ENST00000368408 TSPYL4Q9UJ04 414 aa33.22■■■□□ 2.91
EFNA3-201ENST00000368408 TNS3Q68CZ2 1445 aa33.22■■■□□ 2.91
EFNA3-201ENST00000368408 CERKQ8TCT0 537 aa33.21■■■□□ 2.91
EFNA3-201ENST00000368408 IL17REQ8NFR9 667 aa33.21■■■□□ 2.91
EFNA3-201ENST00000368408 ABCC6O95255 1503 aa33.2■■■□□ 2.91
EFNA3-201ENST00000368408 SOS1Q07889 1333 aaPredicted RBP33.2■■■□□ 2.91
EFNA3-201ENST00000368408 CEMIPQ8WUJ3 1361 aa33.19■■■□□ 2.9
EFNA3-201ENST00000368408 KRT24Q2M2I5 525 aa33.19■■■□□ 2.9
EFNA3-201ENST00000368408 ANKRD24Q8TF21 1146 aa33.19■■■□□ 2.9
EFNA3-201ENST00000368408 LMO7Q8WWI1 1683 aa33.18■■■□□ 2.9
EFNA3-201ENST00000368408 ZBTB7CA1YPR0 619 aa33.16■■■□□ 2.9
EFNA3-201ENST00000368408 CRYBG1Q9Y4K1 1723 aa33.16■■■□□ 2.9
EFNA3-201ENST00000368408 ZBTB7BO15156 539 aaPredicted RBP33.16■■■□□ 2.9
EFNA3-201ENST00000368408 LRRC59Q96AG4 307 aaKnown RBP33.16■■■□□ 2.9
EFNA3-201ENST00000368408 SPATA31A3Q5VYP0 1347 aa33.15■■■□□ 2.9
EFNA3-201ENST00000368408 TAF7Q15545 349 aaPredicted RBP33.15■■■□□ 2.9
EFNA3-201ENST00000368408 AMOTQ4VCS5 1084 aa33.15■■■□□ 2.9
EFNA3-201ENST00000368408 PTPRCP08575 1304 aa33.14■■■□□ 2.9
EFNA3-201ENST00000368408 MIS18AQ9NYP9 233 aa33.14■■■□□ 2.9
EFNA3-201ENST00000368408 AXIN2Q9Y2T1 843 aa33.14■■■□□ 2.9
EFNA3-201ENST00000368408 COL18A1P39060 1754 aa33.14■■■□□ 2.9
EFNA3-201ENST00000368408 PLEKHO1Q53GL0 409 aaPredicted RBP33.14■■■□□ 2.9
EFNA3-201ENST00000368408 RGS12O14924 1447 aa33.13■■■□□ 2.89
EFNA3-201ENST00000368408 DDX17Q92841 729 aaKnown RBP33.13■■■□□ 2.89
EFNA3-201ENST00000368408 RGS3P49796 1198 aa33.11■■■□□ 2.89
EFNA3-201ENST00000368408 FAM161AQ3B820 660 aa33.11■■■□□ 2.89
EFNA3-201ENST00000368408 ERBB3P21860 1342 aa33.11■■■□□ 2.89
EFNA3-201ENST00000368408 AKAP4Q5JQC9 854 aa33.11■■■□□ 2.89
EFNA3-201ENST00000368408 BRINP3Q76B58 766 aa33.11■■■□□ 2.89
EFNA3-201ENST00000368408 OVOS2A0A0G2JMS6 1433 aa33.11■■■□□ 2.89
EFNA3-201ENST00000368408 INTS3Q68E01 1043 aaKnown RBP33.1■■■□□ 2.89
EFNA3-201ENST00000368408 RGPD5Q99666 1765 aa33.1■■■□□ 2.89
EFNA3-201ENST00000368408 PDZRN3Q9UPQ7 1066 aa33.09■■■□□ 2.89
EFNA3-201ENST00000368408 SMC5Q8IY18 1101 aa33.09■■■□□ 2.89
EFNA3-201ENST00000368408 PLEKHG2Q9H7P9 1386 aa33.08■■■□□ 2.89
EFNA3-201ENST00000368408 CPDO75976 1380 aa33.08■■■□□ 2.89
EFNA3-201ENST00000368408 ZC3H6P61129 1189 aaKnown RBP33.06■■■□□ 2.88
EFNA3-201ENST00000368408 C8orf34Q49A92 452 aa33.06■■■□□ 2.88
EFNA3-201ENST00000368408 FAM208AQ9UK61 1670 aaKnown RBP33.05■■■□□ 2.88
EFNA3-201ENST00000368408 ZNF530Q6P9A1 599 aaPredicted RBP33.04■■■□□ 2.88
EFNA3-201ENST00000368408 ANP32AP39687 249 aaKnown RBP33.04■■■□□ 2.88
EFNA3-201ENST00000368408 KDM3BQ7LBC6 1761 aa33.03■■■□□ 2.88
EFNA3-201ENST00000368408 SLC4A2P04920 1241 aa33.03■■■□□ 2.88
EFNA3-201ENST00000368408 SLAIN2Q9P270 581 aa33.03■■■□□ 2.88
EFNA3-201ENST00000368408 SOS2Q07890 1332 aaPredicted RBP33.03■■■□□ 2.88
EFNA3-201ENST00000368408 MSH5O43196 834 aa33.02■■■□□ 2.88
EFNA3-201ENST00000368408 ADAMTS7Q9UKP4 1686 aa33.02■■■□□ 2.88
EFNA3-201ENST00000368408 CACNA1FO60840 1977 aa33.02■■■□□ 2.88
EFNA3-201ENST00000368408 PLEKHG5O94827 1062 aa33.01■■■□□ 2.87
EFNA3-201ENST00000368408 CCDC30Q5VVM6 783 aa33■■■□□ 2.87
EFNA3-201ENST00000368408 LGR6Q9HBX8 967 aa32.99■■■□□ 2.87
EFNA3-201ENST00000368408 VIRMAQ69YN4 1812 aaKnown RBP32.98■■■□□ 2.87
EFNA3-201ENST00000368408 HOXB7P09629 217 aa32.97■■■□□ 2.87
EFNA3-201ENST00000368408 C1orf141Q5JVX7 400 aa32.97■■■□□ 2.87
EFNA3-201ENST00000368408 STK31Q9BXU1 1019 aa32.97■■■□□ 2.87
EFNA3-201ENST00000368408 RNMTO43148 476 aaKnown RBP32.96■■■□□ 2.87
EFNA3-201ENST00000368408 CABLES1Q8TDN4 633 aa32.95■■■□□ 2.87
EFNA3-201ENST00000368408 CHMP4AQ9BY43 222 aa32.94■■■□□ 2.86
EFNA3-201ENST00000368408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.94■■■□□ 2.86
EFNA3-201ENST00000368408 EIF4A1P60842 406 aaKnown RBP32.93■■■□□ 2.86
EFNA3-201ENST00000368408 G2E3Q7L622 706 aa32.93■■■□□ 2.86
EFNA3-201ENST00000368408 GCC1Q96CN9 775 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms