RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 COL5A2P05997 1499 aaPredicted RBP34■■■■□ 3.03
EFNA1-202ENST00000368407 CSB-PGBD3P0DP91 1061 aa33.99■■■■□ 3.03
EFNA1-202ENST00000368407 RSPH6AQ9H0K4 717 aa33.99■■■■□ 3.03
EFNA1-202ENST00000368407 C20orf194Q5TEA3 1177 aa33.98■■■■□ 3.03
EFNA1-202ENST00000368407 STRN4Q9NRL3 753 aa33.98■■■■□ 3.03
EFNA1-202ENST00000368407 FCHSD2O94868 740 aa33.96■■■■□ 3.03
EFNA1-202ENST00000368407 C8orf37Q96NL8 207 aa33.96■■■■□ 3.03
EFNA1-202ENST00000368407 PRKAR2BP31323 418 aa33.95■■■■□ 3.03
EFNA1-202ENST00000368407 NLRP2Q9NX02 1062 aa33.95■■■■□ 3.03
EFNA1-202ENST00000368407 RGPD2P0DJD1 1756 aa33.95■■■■□ 3.03
EFNA1-202ENST00000368407 WDR17Q8IZU2 1322 aa33.94■■■■□ 3.02
EFNA1-202ENST00000368407 C8orf34Q49A92 452 aa33.94■■■■□ 3.02
EFNA1-202ENST00000368407 PLEKHF1Q96S99 279 aa33.94■■■■□ 3.02
EFNA1-202ENST00000368407 EVA1CP58658 441 aa33.94■■■■□ 3.02
EFNA1-202ENST00000368407 KDRP35968 1356 aa33.93■■■■□ 3.02
EFNA1-202ENST00000368407 LARP1Q6PKG0 1096 aaKnown RBP33.93■■■■□ 3.02
EFNA1-202ENST00000368407 RUNDC1Q96C34 613 aa33.92■■■■□ 3.02
EFNA1-202ENST00000368407 PLCH1Q4KWH8 1693 aa33.92■■■■□ 3.02
EFNA1-202ENST00000368407 NGLY1Q96IV0 654 aa33.91■■■■□ 3.02
EFNA1-202ENST00000368407 SLIT2O94813 1529 aa33.9■■■■□ 3.02
EFNA1-202ENST00000368407 TOM1L2Q6ZVM7 507 aa33.9■■■■□ 3.02
EFNA1-202ENST00000368407 MEX3CQ5U5Q3 659 aaKnown RBP33.89■■■■□ 3.02
EFNA1-202ENST00000368407 NCAPD2Q15021 1401 aa33.89■■■■□ 3.02
EFNA1-202ENST00000368407 PHACTR3Q96KR7 559 aa33.89■■■■□ 3.02
EFNA1-202ENST00000368407 APAF1O14727 1248 aa33.88■■■■□ 3.01
EFNA1-202ENST00000368407 DAXXQ9UER7 740 aaPredicted RBP33.87■■■■□ 3.01
EFNA1-202ENST00000368407 GSE1Q14687 1217 aa33.86■■■■□ 3.01
EFNA1-202ENST00000368407 NFKBIBQ15653 356 aa33.86■■■■□ 3.01
EFNA1-202ENST00000368407 PNNQ9H307 717 aaKnown RBP33.86■■■■□ 3.01
EFNA1-202ENST00000368407 E9PSI1 815 aa33.85■■■■□ 3.01
EFNA1-202ENST00000368407 FAM208AQ9UK61 1670 aaKnown RBP33.84■■■■□ 3.01
EFNA1-202ENST00000368407 FNBP4Q8N3X1 1017 aaPredicted RBP33.84■■■■□ 3.01
EFNA1-202ENST00000368407 TCP11L2Q8N4U5 519 aa33.84■■■■□ 3.01
EFNA1-202ENST00000368407 MAPK8IP3Q9UPT6 1336 aa33.84■■■■□ 3.01
EFNA1-202ENST00000368407 CRB1P82279 1406 aa33.83■■■■□ 3.01
EFNA1-202ENST00000368407 NRAPQ86VF7 1730 aa33.82■■■■□ 3.01
EFNA1-202ENST00000368407 CARD10Q9BWT7 1032 aa33.82■■■■□ 3
EFNA1-202ENST00000368407 RRP7AQ9Y3A4 280 aaKnown RBP33.82■■■■□ 3
EFNA1-202ENST00000368407 BCL9LQ86UU0 1499 aa33.81■■■■□ 3
EFNA1-202ENST00000368407 NWD2Q9ULI1 1742 aa33.8■■■■□ 3
EFNA1-202ENST00000368407 AAMPQ13685 434 aa33.8■■■■□ 3
EFNA1-202ENST00000368407 PDE3AQ14432 1141 aa33.8■■■■□ 3
EFNA1-202ENST00000368407 UNC5CLQ8IV45 518 aa33.8■■■■□ 3
EFNA1-202ENST00000368407 NEUROD2Q15784 382 aa33.78■■■■□ 3
EFNA1-202ENST00000368407 SKAP1Q86WV1 359 aa33.77■■■■□ 3
EFNA1-202ENST00000368407 USP21Q9UK80 565 aa33.77■■■■□ 3
EFNA1-202ENST00000368407 AFF2P51816 1311 aa33.76■■■□□ 2.99
EFNA1-202ENST00000368407 TMPOP42166 694 aaKnown RBP33.75■■■□□ 2.99
EFNA1-202ENST00000368407 MEGF6O75095 1541 aa33.75■■■□□ 2.99
EFNA1-202ENST00000368407 RAPGEF4Q8WZA2 1011 aa33.75■■■□□ 2.99
EFNA1-202ENST00000368407 MTHFSDQ2M296 383 aaKnown RBP33.73■■■□□ 2.99
EFNA1-202ENST00000368407 IL27Q8NEV9 243 aa33.73■■■□□ 2.99
EFNA1-202ENST00000368407 NFE2L2Q16236 605 aa33.72■■■□□ 2.99
EFNA1-202ENST00000368407 SPATA31A1Q5TZJ5 1347 aa33.71■■■□□ 2.99
EFNA1-202ENST00000368407 CCDC9Q9Y3X0 531 aaKnown RBP33.71■■■□□ 2.99
EFNA1-202ENST00000368407 SPATA31A5Q5VU36 1347 aa33.7■■■□□ 2.99
EFNA1-202ENST00000368407 SPATA31A7Q8IWB4 1347 aa33.7■■■□□ 2.99
EFNA1-202ENST00000368407 TATP17735 454 aaPredicted RBP33.7■■■□□ 2.99
EFNA1-202ENST00000368407 RIPK4P57078 832 aa33.69■■■□□ 2.98
EFNA1-202ENST00000368407 VPS72Q15906 364 aa33.69■■■□□ 2.98
EFNA1-202ENST00000368407 IL2RBP14784 551 aa33.67■■■□□ 2.98
EFNA1-202ENST00000368407 NCBP3Q53F19 620 aaKnown RBP33.66■■■□□ 2.98
EFNA1-202ENST00000368407 PLEKHO1Q53GL0 409 aaPredicted RBP33.65■■■□□ 2.98
EFNA1-202ENST00000368407 GAS2L2Q8NHY3 880 aa33.65■■■□□ 2.98
EFNA1-202ENST00000368407 TRIM35Q9UPQ4 493 aa33.65■■■□□ 2.98
EFNA1-202ENST00000368407 OVOS2A0A0G2JMS6 1433 aa33.64■■■□□ 2.98
EFNA1-202ENST00000368407 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.64■■■□□ 2.98
EFNA1-202ENST00000368407 AMOTQ4VCS5 1084 aa33.63■■■□□ 2.97
EFNA1-202ENST00000368407 PHF23Q9BUL5 403 aaPredicted RBP33.63■■■□□ 2.97
EFNA1-202ENST00000368407 DISP2A7MBM2 1401 aa33.63■■■□□ 2.97
EFNA1-202ENST00000368407 WWC1Q8IX03 1113 aa33.62■■■□□ 2.97
EFNA1-202ENST00000368407 SPINK5Q9NQ38 1064 aaPredicted RBP33.61■■■□□ 2.97
EFNA1-202ENST00000368407 ZNF530Q6P9A1 599 aaPredicted RBP33.61■■■□□ 2.97
EFNA1-202ENST00000368407 THRAP3Q9Y2W1 955 aaKnown RBP33.61■■■□□ 2.97
EFNA1-202ENST00000368407 CCDC27Q2M243 656 aa33.6■■■□□ 2.97
EFNA1-202ENST00000368407 ILDR1Q86SU0 546 aaPredicted RBP33.59■■■□□ 2.97
EFNA1-202ENST00000368407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.59■■■□□ 2.97
EFNA1-202ENST00000368407 CLUAP1Q96AJ1 413 aa33.58■■■□□ 2.97
EFNA1-202ENST00000368407 SPG7Q9UQ90 795 aa33.58■■■□□ 2.97
EFNA1-202ENST00000368407 ATRNO75882 1429 aa33.58■■■□□ 2.97
EFNA1-202ENST00000368407 RGS3P49796 1198 aa33.57■■■□□ 2.97
EFNA1-202ENST00000368407 DCTN1Q14203 1278 aa33.57■■■□□ 2.97
EFNA1-202ENST00000368407 TRPC5Q9UL62 973 aaPredicted RBP33.57■■■□□ 2.97
EFNA1-202ENST00000368407 PARP4Q9UKK3 1724 aaKnown RBP33.57■■■□□ 2.97
EFNA1-202ENST00000368407 PLEKHG2Q9H7P9 1386 aa33.57■■■□□ 2.96
EFNA1-202ENST00000368407 BCAR3O75815 825 aa33.57■■■□□ 2.96
EFNA1-202ENST00000368407 FRAT1Q92837 279 aaPredicted RBP33.57■■■□□ 2.96
EFNA1-202ENST00000368407 THUMPD2Q9BTF0 503 aaKnown RBP33.57■■■□□ 2.96
EFNA1-202ENST00000368407 DLG5Q8TDM6 1919 aa33.56■■■□□ 2.96
EFNA1-202ENST00000368407 BARGINQ6ZT62 677 aa33.56■■■□□ 2.96
EFNA1-202ENST00000368407 ZCRB1Q8TBF4 217 aaKnown RBP33.56■■■□□ 2.96
EFNA1-202ENST00000368407 FAM98CQ17RN3 349 aaKnown RBP33.55■■■□□ 2.96
EFNA1-202ENST00000368407 GJD4Q96KN9 370 aaPredicted RBP33.55■■■□□ 2.96
EFNA1-202ENST00000368407 QTRT2Q9H974 415 aaKnown RBP33.55■■■□□ 2.96
EFNA1-202ENST00000368407 SLC4A3P48751 1232 aa33.55■■■□□ 2.96
EFNA1-202ENST00000368407 MAP3K5Q99683 1374 aa33.55■■■□□ 2.96
EFNA1-202ENST00000368407 PKD1L3Q7Z443 1732 aa33.54■■■□□ 2.96
EFNA1-202ENST00000368407 GNAT3A8MTJ3 354 aa33.54■■■□□ 2.96
EFNA1-202ENST00000368407 MCM10Q7L590 875 aa33.54■■■□□ 2.96
EFNA1-202ENST00000368407 CYP27B1O15528 508 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms