RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 RTL1A6NKG5 1358 aa18.93■□□□□ 0.62
PMF1-202ENST00000368277 NSD3Q9BZ95 1437 aa18.92■□□□□ 0.62
PMF1-202ENST00000368277 NBPF6Q5VWK0 638 aa18.92■□□□□ 0.62
PMF1-202ENST00000368277 NBPF4Q96M43 638 aa18.92■□□□□ 0.62
PMF1-202ENST00000368277 PCGF6Q9BYE7 350 aa18.92■□□□□ 0.62
PMF1-202ENST00000368277 NSD2O96028 1365 aa18.92■□□□□ 0.62
PMF1-202ENST00000368277 SYTL4Q96C24 671 aaPredicted RBP18.91■□□□□ 0.62
PMF1-202ENST00000368277 CARD14Q9BXL6 1004 aa18.9■□□□□ 0.62
PMF1-202ENST00000368277 PKD1L3Q7Z443 1732 aa18.89■□□□□ 0.61
PMF1-202ENST00000368277 TAF1LQ8IZX4 1826 aa18.89■□□□□ 0.61
PMF1-202ENST00000368277 PRIM1P49642 420 aaKnown RBP18.89■□□□□ 0.61
PMF1-202ENST00000368277 HSP90AB2PQ58FF8 381 aa18.89■□□□□ 0.61
PMF1-202ENST00000368277 COL24A1Q17RW2 1714 aa18.88■□□□□ 0.61
PMF1-202ENST00000368277 ZCRB1Q8TBF4 217 aaKnown RBP18.88■□□□□ 0.61
PMF1-202ENST00000368277 C5P01031 1676 aa18.88■□□□□ 0.61
PMF1-202ENST00000368277 SLC24A1O60721 1099 aa18.87■□□□□ 0.61
PMF1-202ENST00000368277 YY1P25490 414 aa18.87■□□□□ 0.61
PMF1-202ENST00000368277 SMG6Q86US8 1419 aaKnown RBP18.87■□□□□ 0.61
PMF1-202ENST00000368277 CHD4Q14839 1912 aa18.86■□□□□ 0.61
PMF1-202ENST00000368277 SGIP1Q9BQI5 828 aa18.86■□□□□ 0.61
PMF1-202ENST00000368277 POLR3GLQ9BT43 218 aa18.86■□□□□ 0.61
PMF1-202ENST00000368277 FHDC1Q9C0D6 1143 aaPredicted RBP18.86■□□□□ 0.61
PMF1-202ENST00000368277 MTFR1LQ9H019 292 aa18.86■□□□□ 0.61
PMF1-202ENST00000368277 EMILIN1Q9Y6C2 1016 aa18.86■□□□□ 0.61
PMF1-202ENST00000368277 FLT4P35916 1363 aa18.85■□□□□ 0.61
PMF1-202ENST00000368277 INSRP06213 1382 aa18.84■□□□□ 0.61
PMF1-202ENST00000368277 AKT1S1Q96B36 256 aa18.84■□□□□ 0.61
PMF1-202ENST00000368277 CDCA8Q53HL2 280 aa18.83■□□□□ 0.6
PMF1-202ENST00000368277 UTRNP46939 3433 aa18.83■□□□□ 0.6
PMF1-202ENST00000368277 PNPLA7Q6ZV29 1317 aa18.82■□□□□ 0.6
PMF1-202ENST00000368277 RAPGEF4Q8WZA2 1011 aa18.82■□□□□ 0.6
PMF1-202ENST00000368277 PPM1GO15355 546 aaPredicted RBP18.81■□□□□ 0.6
PMF1-202ENST00000368277 TATP17735 454 aaPredicted RBP18.81■□□□□ 0.6
PMF1-202ENST00000368277 SYT17Q9BSW7 474 aa18.81■□□□□ 0.6
PMF1-202ENST00000368277 SLC27A3Q5K4L6 730 aa18.8■□□□□ 0.6
PMF1-202ENST00000368277 ARXQ96QS3 562 aa18.8■□□□□ 0.6
PMF1-202ENST00000368277 DCAF8L1A6NGE4 600 aa18.79■□□□□ 0.6
PMF1-202ENST00000368277 KLHL34Q8N239 644 aa18.79■□□□□ 0.6
PMF1-202ENST00000368277 CCNL1Q9UK58 526 aaPredicted RBP18.79■□□□□ 0.6
PMF1-202ENST00000368277 TFCP2L1Q9NZI6 479 aa18.78■□□□□ 0.6
PMF1-202ENST00000368277 PCDH11XQ9BZA7 1347 aa18.77■□□□□ 0.6
PMF1-202ENST00000368277 PCDH11YQ9BZA8 1340 aa18.77■□□□□ 0.6
PMF1-202ENST00000368277 CYP27B1O15528 508 aa18.77■□□□□ 0.6
PMF1-202ENST00000368277 KIF24Q5T7B8 1368 aa18.77■□□□□ 0.6
PMF1-202ENST00000368277 UBR3Q6ZT12 1888 aa18.77■□□□□ 0.6
PMF1-202ENST00000368277 NCAPD2Q15021 1401 aa18.76■□□□□ 0.59
PMF1-202ENST00000368277 TNNT2P45379 298 aaPredicted RBP18.76■□□□□ 0.59
PMF1-202ENST00000368277 C4BP0C0L5 1744 aa18.76■□□□□ 0.59
PMF1-202ENST00000368277 CGNL1Q0VF96 1302 aa18.75■□□□□ 0.59
PMF1-202ENST00000368277 MPRIPQ6WCQ1 1025 aa18.75■□□□□ 0.59
PMF1-202ENST00000368277 HSPA5P11021 654 aaKnown RBP18.74■□□□□ 0.59
PMF1-202ENST00000368277 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
PMF1-202ENST00000368277 PALLDQ8WX93 1383 aa18.73■□□□□ 0.59
PMF1-202ENST00000368277 MSH5O43196 834 aa18.73■□□□□ 0.59
PMF1-202ENST00000368277 CLSPNQ9HAW4 1339 aa18.73■□□□□ 0.59
PMF1-202ENST00000368277 MSL1Q68DK7 614 aa18.72■□□□□ 0.59
PMF1-202ENST00000368277 COL23A1Q86Y22 540 aaPredicted RBP18.72■□□□□ 0.59
PMF1-202ENST00000368277 EYA1Q99502 592 aa18.72■□□□□ 0.59
PMF1-202ENST00000368277 POLKQ9UBT6 870 aa18.72■□□□□ 0.59
PMF1-202ENST00000368277 GOLGB1Q14789 3259 aaKnown RBP18.71■□□□□ 0.59
PMF1-202ENST00000368277 SMIM5Q71RC9 77 aa18.71■□□□□ 0.59
PMF1-202ENST00000368277 WASHC2AQ641Q2 1341 aa18.71■□□□□ 0.59
PMF1-202ENST00000368277 MAP3K5Q99683 1374 aa18.7■□□□□ 0.58
PMF1-202ENST00000368277 NLGN2Q8NFZ4 835 aa18.7■□□□□ 0.58
PMF1-202ENST00000368277 VIRMAQ69YN4 1812 aaKnown RBP18.7■□□□□ 0.58
PMF1-202ENST00000368277 POLD1P28340 1107 aa18.69■□□□□ 0.58
PMF1-202ENST00000368277 AMIGO3Q86WK7 504 aa18.69■□□□□ 0.58
PMF1-202ENST00000368277 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
PMF1-202ENST00000368277 SLC16A10Q8TF71 515 aa18.69■□□□□ 0.58
PMF1-202ENST00000368277 EIF4G2P78344 907 aaKnown RBP eCLIP18.68■□□□□ 0.58
PMF1-202ENST00000368277 EIF4A2Q14240 407 aaKnown RBP18.68■□□□□ 0.58
PMF1-202ENST00000368277 CCER1Q8TC90 406 aaPredicted RBP18.68■□□□□ 0.58
PMF1-202ENST00000368277 PIGBQ92521 554 aa18.67■□□□□ 0.58
PMF1-202ENST00000368277 PANK3Q9H999 370 aa18.67■□□□□ 0.58
PMF1-202ENST00000368277 GPR162Q16538 588 aa18.65■□□□□ 0.58
PMF1-202ENST00000368277 SPG7Q9UQ90 795 aa18.65■□□□□ 0.58
PMF1-202ENST00000368277 PHF14O94880 888 aa18.64■□□□□ 0.57
PMF1-202ENST00000368277 ZNF784Q8NCA9 323 aaPredicted RBP18.64■□□□□ 0.57
PMF1-202ENST00000368277 COL5A3P25940 1745 aaPredicted RBP18.63■□□□□ 0.57
PMF1-202ENST00000368277 NKX1-1Q15270 411 aaPredicted RBP18.63■□□□□ 0.57
PMF1-202ENST00000368277 PHKG2P15735 406 aa18.62■□□□□ 0.57
PMF1-202ENST00000368277 LINC00116Q8NCU8 138 aa18.62■□□□□ 0.57
PMF1-202ENST00000368277 ASAP1Q9ULH1 1129 aa18.62■□□□□ 0.57
PMF1-202ENST00000368277 AK7Q96M32 723 aa18.61■□□□□ 0.57
PMF1-202ENST00000368277 TMOD3Q9NYL9 352 aa18.61■□□□□ 0.57
PMF1-202ENST00000368277 IGSF1Q8N6C5 1336 aa18.6■□□□□ 0.57
PMF1-202ENST00000368277 IFNL2Q8IZJ0 200 aa18.6■□□□□ 0.57
PMF1-202ENST00000368277 SMARCC1Q92922 1105 aaPredicted RBP18.6■□□□□ 0.57
PMF1-202ENST00000368277 MYH14Q7Z406 1995 aaKnown RBP18.6■□□□□ 0.57
PMF1-202ENST00000368277 SCN11AQ9UI33 1791 aa18.6■□□□□ 0.57
PMF1-202ENST00000368277 LOC102724428A0A0B4J2F2 783 aa18.59■□□□□ 0.57
PMF1-202ENST00000368277 YBX3P16989 372 aaKnown RBP eCLIP18.59■□□□□ 0.57
PMF1-202ENST00000368277 SIK1P57059 783 aa18.59■□□□□ 0.57
PMF1-202ENST00000368277 ITPK1Q13572 414 aa18.59■□□□□ 0.57
PMF1-202ENST00000368277 AEBP1Q8IUX7 1158 aa18.59■□□□□ 0.57
PMF1-202ENST00000368277 C4AP0C0L4 1744 aa18.59■□□□□ 0.57
PMF1-202ENST00000368277 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
PMF1-202ENST00000368277 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.57■□□□□ 0.56
PMF1-202ENST00000368277 MORC1Q86VD1 984 aa18.57■□□□□ 0.56
PMF1-202ENST00000368277 ATG3Q9NT62 314 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms