RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 HSP90AB2PQ58FF8 381 aa13.5□□□□□ -0.25
CD48-202ENST00000368046 RTL1A6NKG5 1358 aa13.49□□□□□ -0.25
CD48-202ENST00000368046 PER1O15534 1290 aaPredicted RBP13.49□□□□□ -0.25
CD48-202ENST00000368046 POLKQ9UBT6 870 aa13.49□□□□□ -0.25
CD48-202ENST00000368046 EMILIN1Q9Y6C2 1016 aa13.49□□□□□ -0.25
CD48-202ENST00000368046 INSRP06213 1382 aa13.48□□□□□ -0.25
CD48-202ENST00000368046 WASHC2AQ641Q2 1341 aa13.48□□□□□ -0.25
CD48-202ENST00000368046 PPM1GO15355 546 aaPredicted RBP13.48□□□□□ -0.25
CD48-202ENST00000368046 TRIM37O94972 964 aa13.48□□□□□ -0.25
CD48-202ENST00000368046 BAG6P46379 1132 aa13.48□□□□□ -0.25
CD48-202ENST00000368046 NBPF6Q5VWK0 638 aa13.48□□□□□ -0.25
CD48-202ENST00000368046 DEFB132Q7Z7B7 95 aa13.48□□□□□ -0.25
CD48-202ENST00000368046 MORC1Q86VD1 984 aa13.48□□□□□ -0.25
CD48-202ENST00000368046 MARCH10Q8NA82 808 aaPredicted RBP13.48□□□□□ -0.25
CD48-202ENST00000368046 NBPF4Q96M43 638 aa13.48□□□□□ -0.25
CD48-202ENST00000368046 FLT4P35916 1363 aa13.47□□□□□ -0.25
CD48-202ENST00000368046 TNNT2P45379 298 aaPredicted RBP13.47□□□□□ -0.25
CD48-202ENST00000368046 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
CD48-202ENST00000368046 EP400Q96L91 3159 aa13.47□□□□□ -0.25
CD48-202ENST00000368046 DISP2A7MBM2 1401 aa13.47□□□□□ -0.25
CD48-202ENST00000368046 NSD2O96028 1365 aa13.46□□□□□ -0.25
CD48-202ENST00000368046 RGPD5Q99666 1765 aa13.46□□□□□ -0.25
CD48-202ENST00000368046 APBA3O96018 575 aa13.46□□□□□ -0.25
CD48-202ENST00000368046 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
CD48-202ENST00000368046 AMER1Q5JTC6 1135 aaPredicted RBP13.46□□□□□ -0.25
CD48-202ENST00000368046 EN1Q05925 392 aaPredicted RBP13.45□□□□□ -0.26
CD48-202ENST00000368046 LTN1O94822 1766 aa13.45□□□□□ -0.26
CD48-202ENST00000368046 SMG6Q86US8 1419 aaKnown RBP13.44□□□□□ -0.26
CD48-202ENST00000368046 OVOS2A0A0G2JMS6 1433 aa13.43□□□□□ -0.26
CD48-202ENST00000368046 ZCRB1Q8TBF4 217 aaKnown RBP13.43□□□□□ -0.26
CD48-202ENST00000368046 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
CD48-202ENST00000368046 PARP4Q9UKK3 1724 aaKnown RBP13.43□□□□□ -0.26
CD48-202ENST00000368046 BCL9O00512 1426 aa13.42□□□□□ -0.26
CD48-202ENST00000368046 KIF20BQ96Q89 1820 aa13.42□□□□□ -0.26
CD48-202ENST00000368046 CD44P16070 742 aaKnown RBP13.42□□□□□ -0.26
CD48-202ENST00000368046 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
CD48-202ENST00000368046 DDX54Q8TDD1 881 aaKnown RBP13.42□□□□□ -0.26
CD48-202ENST00000368046 RAPGEF4Q8WZA2 1011 aa13.42□□□□□ -0.26
CD48-202ENST00000368046 CAMKK2Q96RR4 588 aa13.42□□□□□ -0.26
CD48-202ENST00000368046 PLSCR1O15162 318 aa13.41□□□□□ -0.26
CD48-202ENST00000368046 TATP17735 454 aaPredicted RBP13.41□□□□□ -0.26
CD48-202ENST00000368046 EZH2Q15910 746 aaKnown RBP13.41□□□□□ -0.26
CD48-202ENST00000368046 EYA1Q99502 592 aa13.41□□□□□ -0.26
CD48-202ENST00000368046 EIF4A2Q14240 407 aaKnown RBP13.4□□□□□ -0.26
CD48-202ENST00000368046 CC2D1BQ5T0F9 858 aaKnown RBP13.4□□□□□ -0.26
CD48-202ENST00000368046 TNS2Q63HR2 1409 aa13.39□□□□□ -0.27
CD48-202ENST00000368046 NPC1L1Q9UHC9 1359 aa13.38□□□□□ -0.27
CD48-202ENST00000368046 KCNQ2O43526 872 aa13.38□□□□□ -0.27
CD48-202ENST00000368046 ZEB1P37275 1124 aaPredicted RBP13.38□□□□□ -0.27
CD48-202ENST00000368046 PTF1AQ7RTS3 328 aa13.38□□□□□ -0.27
CD48-202ENST00000368046 ACSBG1Q96GR2 724 aa13.38□□□□□ -0.27
CD48-202ENST00000368046 LRRC37A3O60309 1634 aa13.38□□□□□ -0.27
CD48-202ENST00000368046 PARD3Q8TEW0 1356 aa13.37□□□□□ -0.27
CD48-202ENST00000368046 PEAK1Q9H792 1746 aa13.37□□□□□ -0.27
CD48-202ENST00000368046 MTHFSP49914 203 aa13.37□□□□□ -0.27
CD48-202ENST00000368046 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.36□□□□□ -0.27
CD48-202ENST00000368046 FAM208AQ9UK61 1670 aaKnown RBP13.36□□□□□ -0.27
CD48-202ENST00000368046 MAP2P11137 1827 aaKnown RBP13.35□□□□□ -0.27
CD48-202ENST00000368046 CNGB1Q14028 1251 aaPredicted RBP13.35□□□□□ -0.27
CD48-202ENST00000368046 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
CD48-202ENST00000368046 RGPD1P0DJD0 1748 aa13.35□□□□□ -0.27
CD48-202ENST00000368046 MEGF6O75095 1541 aa13.34□□□□□ -0.27
CD48-202ENST00000368046 IL13P35225 146 aa13.34□□□□□ -0.27
CD48-202ENST00000368046 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
CD48-202ENST00000368046 CLCN6P51797 869 aa13.34□□□□□ -0.27
CD48-202ENST00000368046 NBPF14Q5TI25 921 aa13.34□□□□□ -0.27
CD48-202ENST00000368046 PROM2Q8N271 834 aa13.34□□□□□ -0.27
CD48-202ENST00000368046 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
CD48-202ENST00000368046 IGSF1Q8N6C5 1336 aa13.34□□□□□ -0.27
CD48-202ENST00000368046 ANKRD26Q9UPS8 1709 aa13.33□□□□□ -0.27
CD48-202ENST00000368046 CYP27B1O15528 508 aa13.33□□□□□ -0.28
CD48-202ENST00000368046 WNK3Q9BYP7 1800 aa13.33□□□□□ -0.28
CD48-202ENST00000368046 PCDH11XQ9BZA7 1347 aa13.33□□□□□ -0.28
CD48-202ENST00000368046 PCDH11YQ9BZA8 1340 aa13.33□□□□□ -0.28
CD48-202ENST00000368046 NCAPD2Q15021 1401 aa13.32□□□□□ -0.28
CD48-202ENST00000368046 TXNRD1Q16881 649 aa13.32□□□□□ -0.28
CD48-202ENST00000368046 SYTL4Q96C24 671 aaPredicted RBP13.32□□□□□ -0.28
CD48-202ENST00000368046 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
CD48-202ENST00000368046 DIAPH1O60610 1272 aaKnown RBP13.31□□□□□ -0.28
CD48-202ENST00000368046 NKX1-1Q15270 411 aaPredicted RBP13.31□□□□□ -0.28
CD48-202ENST00000368046 IFNL2Q8IZJ0 200 aa13.31□□□□□ -0.28
CD48-202ENST00000368046 RGPD2P0DJD1 1756 aa13.3□□□□□ -0.28
CD48-202ENST00000368046 R3HDM1Q15032 1099 aaKnown RBP13.3□□□□□ -0.28
CD48-202ENST00000368046 AMOTQ4VCS5 1084 aa13.3□□□□□ -0.28
CD48-202ENST00000368046 PLEKHO1Q53GL0 409 aaPredicted RBP13.3□□□□□ -0.28
CD48-202ENST00000368046 SULT6B1Q6IMI4 303 aa13.3□□□□□ -0.28
CD48-202ENST00000368046 PLEKHG2Q9H7P9 1386 aa13.3□□□□□ -0.28
CD48-202ENST00000368046 TNS1Q9HBL0 1735 aaKnown RBP13.3□□□□□ -0.28
CD48-202ENST00000368046 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
CD48-202ENST00000368046 PHKG2P15735 406 aa13.28□□□□□ -0.28
CD48-202ENST00000368046 DDX10Q13206 875 aaKnown RBP13.28□□□□□ -0.28
CD48-202ENST00000368046 PPP2R1AP30153 589 aa13.27□□□□□ -0.29
CD48-202ENST00000368046 MPRIPQ6WCQ1 1025 aa13.27□□□□□ -0.29
CD48-202ENST00000368046 AEBP1Q8IUX7 1158 aa13.27□□□□□ -0.29
CD48-202ENST00000368046 CFAP53Q96M91 514 aa13.27□□□□□ -0.29
CD48-202ENST00000368046 SBF2Q86WG5 1849 aa13.27□□□□□ -0.29
CD48-202ENST00000368046 HSP90AB1P08238 724 aaKnown RBP13.26□□□□□ -0.29
CD48-202ENST00000368046 KDRP35968 1356 aa13.26□□□□□ -0.29
CD48-202ENST00000368046 SLC27A3Q5K4L6 730 aa13.26□□□□□ -0.29
CD48-202ENST00000368046 HMOX1P09601 288 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms