RNA–Protein interactions for RNA: ENST00000367338.7

CACNA1S-202, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1S, Length 5,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-202ENST00000367338 THUMPD2Q9BTF0 503 aaKnown RBP11.7□□□□□ -0.54
CACNA1S-202ENST00000367338 PPIP5K1Q6PFW1 1433 aa11.7□□□□□ -0.54
CACNA1S-202ENST00000367338 MAGI2Q86UL8 1455 aa11.7□□□□□ -0.54
CACNA1S-202ENST00000367338 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.7□□□□□ -0.54
CACNA1S-202ENST00000367338 ESCO1Q5FWF5 840 aa11.69□□□□□ -0.54
CACNA1S-202ENST00000367338 MBIPQ9NS73 344 aa11.69□□□□□ -0.54
CACNA1S-202ENST00000367338 TET3O43151 1660 aa11.69□□□□□ -0.54
CACNA1S-202ENST00000367338 PCDHB15Q9Y5E8 787 aa11.69□□□□□ -0.54
CACNA1S-202ENST00000367338 TNRQ92752 1358 aa11.69□□□□□ -0.54
CACNA1S-202ENST00000367338 RAB11FIP3O75154 756 aa11.69□□□□□ -0.54
CACNA1S-202ENST00000367338 KCNH5Q8NCM2 988 aa11.69□□□□□ -0.54
CACNA1S-202ENST00000367338 VPS53Q5VIR6 699 aa11.69□□□□□ -0.54
CACNA1S-202ENST00000367338 IL27Q8NEV9 243 aa11.69□□□□□ -0.54
CACNA1S-202ENST00000367338 ATF3P18847 181 aa11.69□□□□□ -0.54
CACNA1S-202ENST00000367338 BRPF3Q9ULD4 1205 aa11.69□□□□□ -0.54
CACNA1S-202ENST00000367338 SLC26A8Q96RN1 970 aa11.68□□□□□ -0.54
CACNA1S-202ENST00000367338 TTC21AQ8NDW8 1320 aa11.68□□□□□ -0.54
CACNA1S-202ENST00000367338 MCM10Q7L590 875 aa11.68□□□□□ -0.54
CACNA1S-202ENST00000367338 CCDC39Q9UFE4 941 aa11.68□□□□□ -0.54
CACNA1S-202ENST00000367338 ANKLE2Q86XL3 938 aa11.67□□□□□ -0.54
CACNA1S-202ENST00000367338 BCORL1Q5H9F3 1711 aa11.67□□□□□ -0.54
CACNA1S-202ENST00000367338 CREBRFQ8IUR6 639 aa11.67□□□□□ -0.54
CACNA1S-202ENST00000367338 GRPEL1Q9HAV7 217 aa11.67□□□□□ -0.54
CACNA1S-202ENST00000367338 ZFYVE16Q7Z3T8 1539 aa11.67□□□□□ -0.54
CACNA1S-202ENST00000367338 PLA2R1Q13018 1463 aa11.67□□□□□ -0.54
CACNA1S-202ENST00000367338 MRPL50Q8N5N7 158 aaKnown RBP11.67□□□□□ -0.54
CACNA1S-202ENST00000367338 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
CACNA1S-202ENST00000367338 ZMYM3Q14202 1370 aa11.67□□□□□ -0.54
CACNA1S-202ENST00000367338 TCEAL9Q9UHQ7 104 aa11.67□□□□□ -0.54
CACNA1S-202ENST00000367338 ZNF530Q6P9A1 599 aaPredicted RBP11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 NPATQ14207 1427 aa11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 PDIA4P13667 645 aaKnown RBP11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 LAMC1P11047 1609 aa11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 KIF1BO60333 1816 aa11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 POLR1AO95602 1720 aaPredicted RBP11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 CDR1P51861 262 aa11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 CAVIN1Q6NZI2 390 aaKnown RBP11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 AEBP1Q8IUX7 1158 aa11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 ERVK-7P63135 1459 aa11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 WDR33Q9C0J8 1336 aaKnown RBP11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 TAF7Q15545 349 aaPredicted RBP11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 NLRP2Q9NX02 1062 aa11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 FOXD4L6Q3SYB3 417 aaPredicted RBP11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 FOXD4L3Q6VB84 417 aaPredicted RBP11.66□□□□□ -0.54
CACNA1S-202ENST00000367338 PES1O00541 588 aaKnown RBP11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 PRPF40AO75400 957 aaKnown RBP11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 PDCP20941 246 aa11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 TATP17735 454 aaPredicted RBP11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 FSD1Q9BTV5 496 aa11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 POLKQ9UBT6 870 aa11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 CTDP1Q9Y5B0 961 aaPredicted RBP11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 VPS37CA5D8V6 355 aaPredicted RBP11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 EVA1CP58658 441 aa11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 TRDNQ13061 729 aa11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 SPINK5Q9NQ38 1064 aaPredicted RBP11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 MX1P20591 662 aa11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 AIMP1Q12904 312 aaKnown RBP11.65□□□□□ -0.54
CACNA1S-202ENST00000367338 ANKRD1Q15327 319 aa11.64□□□□□ -0.55
CACNA1S-202ENST00000367338 TSPY26PQ9H489 355 aa11.64□□□□□ -0.55
CACNA1S-202ENST00000367338 BTBD11A6QL63 1104 aa11.64□□□□□ -0.55
CACNA1S-202ENST00000367338 TEX35Q5T0J7 233 aa11.64□□□□□ -0.55
CACNA1S-202ENST00000367338 AMOTL2Q9Y2J4 779 aa11.64□□□□□ -0.55
CACNA1S-202ENST00000367338 ACEP12821 1306 aa11.64□□□□□ -0.55
CACNA1S-202ENST00000367338 ACBD3Q9H3P7 528 aa11.64□□□□□ -0.55
CACNA1S-202ENST00000367338 SPG7Q9UQ90 795 aa11.64□□□□□ -0.55
CACNA1S-202ENST00000367338 TRMT2AQ8IZ69 625 aaKnown RBP11.64□□□□□ -0.55
CACNA1S-202ENST00000367338 CPLX1O14810 134 aa11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 AMOTQ4VCS5 1084 aa11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 TBC1D9Q6ZT07 1266 aa11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 SNX21Q969T3 373 aa11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 KIF1BPQ96EK5 621 aa11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 ZSCAN31Q96LW9 406 aaPredicted RBP11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 EDC4Q6P2E9 1401 aaKnown RBP11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 TTC22Q5TAA0 569 aa11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 SMC5Q8IY18 1101 aa11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 CYP46A1Q9Y6A2 500 aa11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 ERICH2A1L162 156 aa11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 SRGAP3O43295 1099 aa11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 RLBP1P12271 317 aa11.63□□□□□ -0.55
CACNA1S-202ENST00000367338 ZBTB40Q9NUA8 1239 aa11.62□□□□□ -0.55
CACNA1S-202ENST00000367338 CDC42BPBQ9Y5S2 1711 aa11.62□□□□□ -0.55
CACNA1S-202ENST00000367338 BICD2Q8TD16 824 aa11.62□□□□□ -0.55
CACNA1S-202ENST00000367338 PROSER2Q86WR7 435 aaPredicted RBP11.61□□□□□ -0.55
CACNA1S-202ENST00000367338 ZNF521Q96K83 1311 aa11.61□□□□□ -0.55
CACNA1S-202ENST00000367338 SASS6Q6UVJ0 657 aa11.61□□□□□ -0.55
CACNA1S-202ENST00000367338 CLASP1Q7Z460 1538 aa11.61□□□□□ -0.55
CACNA1S-202ENST00000367338 SAFBQ15424 915 aaKnown RBP eCLIP11.61□□□□□ -0.55
CACNA1S-202ENST00000367338 VAMP4O75379 141 aa11.61□□□□□ -0.55
CACNA1S-202ENST00000367338 SPHKAPQ2M3C7 1700 aa11.61□□□□□ -0.55
CACNA1S-202ENST00000367338 PIK3R4Q99570 1358 aa11.61□□□□□ -0.55
CACNA1S-202ENST00000367338 ANKRD44Q8N8A2 993 aa11.6□□□□□ -0.55
CACNA1S-202ENST00000367338 MIS18AQ9NYP9 233 aa11.6□□□□□ -0.55
CACNA1S-202ENST00000367338 MAP3K4Q9Y6R4 1608 aa11.6□□□□□ -0.55
CACNA1S-202ENST00000367338 PODXL2Q9NZ53 605 aa11.6□□□□□ -0.55
CACNA1S-202ENST00000367338 FLIIQ13045 1269 aa11.6□□□□□ -0.55
CACNA1S-202ENST00000367338 ARGLU1Q9NWB6 273 aaPredicted RBP11.6□□□□□ -0.55
CACNA1S-202ENST00000367338 EXOC6BQ9Y2D4 811 aa11.6□□□□□ -0.55
CACNA1S-202ENST00000367338 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms