RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 SLC27A3Q5K4L6 730 aa20.55■□□□□ 0.88
CTSD-202ENST00000367196 ZBTB7AO95365 584 aa20.54■□□□□ 0.88
CTSD-202ENST00000367196 SYTL4Q96C24 671 aaPredicted RBP20.54■□□□□ 0.88
CTSD-202ENST00000367196 NBPF6Q5VWK0 638 aa20.53■□□□□ 0.88
CTSD-202ENST00000367196 NBPF4Q96M43 638 aa20.53■□□□□ 0.88
CTSD-202ENST00000367196 MTFR1LQ9H019 292 aa20.53■□□□□ 0.88
CTSD-202ENST00000367196 TATP17735 454 aaPredicted RBP20.52■□□□□ 0.88
CTSD-202ENST00000367196 ANKRD26Q9UPS8 1709 aa20.52■□□□□ 0.88
CTSD-202ENST00000367196 PCDH11XQ9BZA7 1347 aa20.52■□□□□ 0.87
CTSD-202ENST00000367196 PCDH11YQ9BZA8 1340 aa20.52■□□□□ 0.87
CTSD-202ENST00000367196 HSP90AB2PQ58FF8 381 aa20.51■□□□□ 0.87
CTSD-202ENST00000367196 CARD14Q9BXL6 1004 aa20.51■□□□□ 0.87
CTSD-202ENST00000367196 QSER1Q2KHR3 1735 aa20.5■□□□□ 0.87
CTSD-202ENST00000367196 PRIM1P49642 420 aaKnown RBP20.5■□□□□ 0.87
CTSD-202ENST00000367196 USHBP1Q8N6Y0 703 aa20.5■□□□□ 0.87
CTSD-202ENST00000367196 PDGFDQ9GZP0 370 aaPredicted RBP20.5■□□□□ 0.87
CTSD-202ENST00000367196 LY75O60449 1722 aa20.5■□□□□ 0.87
CTSD-202ENST00000367196 HMGB2P26583 209 aaKnown RBP20.49■□□□□ 0.87
CTSD-202ENST00000367196 EIF4G2P78344 907 aaKnown RBP eCLIP20.49■□□□□ 0.87
CTSD-202ENST00000367196 ATF5Q9Y2D1 282 aaPredicted RBP20.49■□□□□ 0.87
CTSD-202ENST00000367196 PTGER2P43116 358 aa20.48■□□□□ 0.87
CTSD-202ENST00000367196 CCER1Q8TC90 406 aaPredicted RBP20.48■□□□□ 0.87
CTSD-202ENST00000367196 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
CTSD-202ENST00000367196 LRRC4BQ9NT99 713 aa20.47■□□□□ 0.87
CTSD-202ENST00000367196 NSD2O96028 1365 aa20.46■□□□□ 0.87
CTSD-202ENST00000367196 EMILIN1Q9Y6C2 1016 aa20.46■□□□□ 0.87
CTSD-202ENST00000367196 MAP2P11137 1827 aaKnown RBP20.46■□□□□ 0.87
CTSD-202ENST00000367196 PPM1GO15355 546 aaPredicted RBP20.45■□□□□ 0.86
CTSD-202ENST00000367196 ZNF827Q17R98 1081 aa20.45■□□□□ 0.86
CTSD-202ENST00000367196 SLC16A10Q8TF71 515 aa20.45■□□□□ 0.86
CTSD-202ENST00000367196 PKD1L3Q7Z443 1732 aa20.44■□□□□ 0.86
CTSD-202ENST00000367196 AKT1S1Q96B36 256 aa20.44■□□□□ 0.86
CTSD-202ENST00000367196 TFCP2L1Q9NZI6 479 aa20.44■□□□□ 0.86
CTSD-202ENST00000367196 WASHC2AQ641Q2 1341 aa20.44■□□□□ 0.86
CTSD-202ENST00000367196 NCAPD2Q15021 1401 aa20.44■□□□□ 0.86
CTSD-202ENST00000367196 CCNL1Q9UK58 526 aaPredicted RBP20.43■□□□□ 0.86
CTSD-202ENST00000367196 YY1P25490 414 aa20.42■□□□□ 0.86
CTSD-202ENST00000367196 SGIP1Q9BQI5 828 aa20.42■□□□□ 0.86
CTSD-202ENST00000367196 ARXQ96QS3 562 aa20.41■□□□□ 0.86
CTSD-202ENST00000367196 FHDC1Q9C0D6 1143 aaPredicted RBP20.41■□□□□ 0.86
CTSD-202ENST00000367196 TUBGCP6Q96RT7 1819 aa20.41■□□□□ 0.86
CTSD-202ENST00000367196 HSPA5P11021 654 aaKnown RBP20.4■□□□□ 0.86
CTSD-202ENST00000367196 POLD1P28340 1107 aa20.4■□□□□ 0.86
CTSD-202ENST00000367196 MAP3K5Q99683 1374 aa20.4■□□□□ 0.86
CTSD-202ENST00000367196 SPG7Q9UQ90 795 aa20.4■□□□□ 0.86
CTSD-202ENST00000367196 PLEKHG2Q9H7P9 1386 aa20.39■□□□□ 0.85
CTSD-202ENST00000367196 PNPLA7Q6ZV29 1317 aa20.39■□□□□ 0.85
CTSD-202ENST00000367196 SYT17Q9BSW7 474 aa20.39■□□□□ 0.85
CTSD-202ENST00000367196 C5P01031 1676 aa20.38■□□□□ 0.85
CTSD-202ENST00000367196 POLKQ9UBT6 870 aa20.38■□□□□ 0.85
CTSD-202ENST00000367196 COL24A1Q17RW2 1714 aa20.37■□□□□ 0.85
CTSD-202ENST00000367196 CYP27B1O15528 508 aa20.37■□□□□ 0.85
CTSD-202ENST00000367196 SMARCC1Q92922 1105 aaPredicted RBP20.37■□□□□ 0.85
CTSD-202ENST00000367196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.37■□□□□ 0.85
CTSD-202ENST00000367196 ITGB4P16144 1822 aa20.37■□□□□ 0.85
CTSD-202ENST00000367196 PALLDQ8WX93 1383 aa20.36■□□□□ 0.85
CTSD-202ENST00000367196 MPRIPQ6WCQ1 1025 aa20.36■□□□□ 0.85
CTSD-202ENST00000367196 TOGARAM1Q9Y4F4 1720 aa20.36■□□□□ 0.85
CTSD-202ENST00000367196 KCNQ4P56696 695 aa20.35■□□□□ 0.85
CTSD-202ENST00000367196 EYA1Q99502 592 aa20.35■□□□□ 0.85
CTSD-202ENST00000367196 PANK3Q9H999 370 aa20.35■□□□□ 0.85
CTSD-202ENST00000367196 TNNT2P45379 298 aaPredicted RBP20.34■□□□□ 0.85
CTSD-202ENST00000367196 TAF1LQ8IZX4 1826 aa20.33■□□□□ 0.85
CTSD-202ENST00000367196 NKX1-1Q15270 411 aaPredicted RBP20.33■□□□□ 0.85
CTSD-202ENST00000367196 FLAD1Q8NFF5 587 aa20.33■□□□□ 0.85
CTSD-202ENST00000367196 MSH5O43196 834 aa20.32■□□□□ 0.84
CTSD-202ENST00000367196 IFNL2Q8IZJ0 200 aa20.32■□□□□ 0.84
CTSD-202ENST00000367196 EIF4A2Q14240 407 aaKnown RBP20.31■□□□□ 0.84
CTSD-202ENST00000367196 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
CTSD-202ENST00000367196 MORC1Q86VD1 984 aa20.29■□□□□ 0.84
CTSD-202ENST00000367196 KLHL34Q8N239 644 aa20.29■□□□□ 0.84
CTSD-202ENST00000367196 TMOD3Q9NYL9 352 aa20.29■□□□□ 0.84
CTSD-202ENST00000367196 C4BP0C0L5 1744 aa20.29■□□□□ 0.84
CTSD-202ENST00000367196 IGSF1Q8N6C5 1336 aa20.28■□□□□ 0.84
CTSD-202ENST00000367196 UTRNP46939 3433 aa20.28■□□□□ 0.84
CTSD-202ENST00000367196 CHD4Q14839 1912 aa20.28■□□□□ 0.84
CTSD-202ENST00000367196 PIGBQ92521 554 aa20.28■□□□□ 0.84
CTSD-202ENST00000367196 AK7Q96M32 723 aa20.28■□□□□ 0.84
CTSD-202ENST00000367196 PHKG2P15735 406 aa20.27■□□□□ 0.84
CTSD-202ENST00000367196 COL23A1Q86Y22 540 aaPredicted RBP20.27■□□□□ 0.84
CTSD-202ENST00000367196 HSP90AB1P08238 724 aaKnown RBP20.26■□□□□ 0.83
CTSD-202ENST00000367196 GPR162Q16538 588 aa20.24■□□□□ 0.83
CTSD-202ENST00000367196 AMOTQ4VCS5 1084 aa20.24■□□□□ 0.83
CTSD-202ENST00000367196 LOC102724428A0A0B4J2F2 783 aa20.23■□□□□ 0.83
CTSD-202ENST00000367196 SIK1P57059 783 aa20.23■□□□□ 0.83
CTSD-202ENST00000367196 PLEKHO1Q53GL0 409 aaPredicted RBP20.23■□□□□ 0.83
CTSD-202ENST00000367196 UBR3Q6ZT12 1888 aa20.23■□□□□ 0.83
CTSD-202ENST00000367196 DCAF5Q96JK2 942 aa20.22■□□□□ 0.83
CTSD-202ENST00000367196 ERVV-2B6SEH9 535 aa20.21■□□□□ 0.83
CTSD-202ENST00000367196 SSFA2P28290 1259 aa20.2■□□□□ 0.82
CTSD-202ENST00000367196 ATP6V1AP38606 617 aa20.19■□□□□ 0.82
CTSD-202ENST00000367196 C1orf141Q5JVX7 400 aa20.19■□□□□ 0.82
CTSD-202ENST00000367196 MSL1Q68DK7 614 aa20.19■□□□□ 0.82
CTSD-202ENST00000367196 KIF7Q2M1P5 1343 aa20.19■□□□□ 0.82
CTSD-202ENST00000367196 ZNF831Q5JPB2 1677 aa20.19■□□□□ 0.82
CTSD-202ENST00000367196 PHF14O94880 888 aa20.18■□□□□ 0.82
CTSD-202ENST00000367196 ZNF530Q6P9A1 599 aaPredicted RBP20.18■□□□□ 0.82
CTSD-202ENST00000367196 PELP1Q8IZL8 1130 aaKnown RBP20.18■□□□□ 0.82
CTSD-202ENST00000367196 ASAP1Q9ULH1 1129 aa20.18■□□□□ 0.82
CTSD-202ENST00000367196 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms