RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 KIF14Q15058 1648 aa13.62□□□□□ -0.23
RD3-201ENST00000367002 FAM177BA6PVY3 158 aa13.62□□□□□ -0.23
RD3-201ENST00000367002 HDAC1Q13547 482 aaPredicted RBP13.62□□□□□ -0.23
RD3-201ENST00000367002 DDX54Q8TDD1 881 aaKnown RBP13.62□□□□□ -0.23
RD3-201ENST00000367002 FAM83GA6ND36 823 aa13.62□□□□□ -0.23
RD3-201ENST00000367002 FYB1O15117 783 aa13.62□□□□□ -0.23
RD3-201ENST00000367002 NUP62CLQ9H1M0 184 aa13.62□□□□□ -0.23
RD3-201ENST00000367002 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
RD3-201ENST00000367002 TNNQ9UQP3 1299 aa13.62□□□□□ -0.23
RD3-201ENST00000367002 RAD21O60216 631 aa13.62□□□□□ -0.23
RD3-201ENST00000367002 CEP89Q96ST8 783 aa13.62□□□□□ -0.23
RD3-201ENST00000367002 SART3Q15020 963 aaKnown RBP13.61□□□□□ -0.23
RD3-201ENST00000367002 CCDC158Q5M9N0 1113 aa13.61□□□□□ -0.23
RD3-201ENST00000367002 CCDC83Q8IWF9 413 aa13.61□□□□□ -0.23
RD3-201ENST00000367002 DHX29Q7Z478 1369 aaKnown RBP13.61□□□□□ -0.23
RD3-201ENST00000367002 PLEKHH1Q9ULM0 1364 aa13.61□□□□□ -0.23
RD3-201ENST00000367002 UQCRHLA0A096LP55 91 aa13.61□□□□□ -0.23
RD3-201ENST00000367002 WASLO00401 505 aaPredicted RBP13.61□□□□□ -0.23
RD3-201ENST00000367002 UQCRHP07919 91 aa13.61□□□□□ -0.23
RD3-201ENST00000367002 RLBP1P12271 317 aa13.61□□□□□ -0.23
RD3-201ENST00000367002 MBIPQ9NS73 344 aa13.61□□□□□ -0.23
RD3-201ENST00000367002 PRAG1Q86YV5 1406 aa13.61□□□□□ -0.23
RD3-201ENST00000367002 XBP1P17861 261 aa13.61□□□□□ -0.23
RD3-201ENST00000367002 TAF7Q15545 349 aaPredicted RBP13.61□□□□□ -0.23
RD3-201ENST00000367002 RRP12Q5JTH9 1297 aaKnown RBP13.61□□□□□ -0.23
RD3-201ENST00000367002 IL16Q14005 1332 aa13.61□□□□□ -0.23
RD3-201ENST00000367002 FILIP1Q7Z7B0 1213 aa13.61□□□□□ -0.23
RD3-201ENST00000367002 LRRFIP2Q9Y608 721 aaKnown RBP13.61□□□□□ -0.23
RD3-201ENST00000367002 BAG4O95429 457 aaKnown RBP13.6□□□□□ -0.23
RD3-201ENST00000367002 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
RD3-201ENST00000367002 DDX11Q96FC9 970 aa13.6□□□□□ -0.23
RD3-201ENST00000367002 FKBP4Q02790 459 aaKnown RBP eCLIP13.6□□□□□ -0.23
RD3-201ENST00000367002 ADGRL1O94910 1474 aa13.6□□□□□ -0.23
RD3-201ENST00000367002 NSD2O96028 1365 aa13.6□□□□□ -0.23
RD3-201ENST00000367002 CABP4P57796 275 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 JMYQ8N9B5 988 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 GDPD2Q9HCC8 539 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 CFAP45Q9UL16 551 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 NUCB1Q02818 461 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 FLIIQ13045 1269 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 KRT32Q14532 448 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
RD3-201ENST00000367002 RAB11FIP3O75154 756 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 XPCQ01831 940 aaPredicted RBP13.59□□□□□ -0.23
RD3-201ENST00000367002 CD109Q6YHK3 1445 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 CCDC112Q8NEF3 446 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
RD3-201ENST00000367002 CEP126Q9P2H0 1117 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 BOLA2Q9H3K6 86 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
RD3-201ENST00000367002 RRP9O43818 475 aaKnown RBP13.58□□□□□ -0.24
RD3-201ENST00000367002 BRMS1Q9HCU9 246 aa13.58□□□□□ -0.24
RD3-201ENST00000367002 MAP3K11Q16584 847 aa13.58□□□□□ -0.24
RD3-201ENST00000367002 TTC39AQ5SRH9 613 aa13.58□□□□□ -0.24
RD3-201ENST00000367002 LARP6Q9BRS8 491 aaKnown RBP13.58□□□□□ -0.24
RD3-201ENST00000367002 MTMR7Q9Y216 660 aa13.58□□□□□ -0.24
RD3-201ENST00000367002 PDIA4P13667 645 aaKnown RBP13.58□□□□□ -0.24
RD3-201ENST00000367002 ZC3H6P61129 1189 aaKnown RBP13.58□□□□□ -0.24
RD3-201ENST00000367002 TSHZ3Q63HK5 1081 aa13.58□□□□□ -0.24
RD3-201ENST00000367002 SEC24BO95487 1268 aa13.57□□□□□ -0.24
RD3-201ENST00000367002 TTLL5Q6EMB2 1281 aa13.57□□□□□ -0.24
RD3-201ENST00000367002 ARHGAP45Q92619 1136 aa13.57□□□□□ -0.24
RD3-201ENST00000367002 CARD14Q9BXL6 1004 aa13.57□□□□□ -0.24
RD3-201ENST00000367002 SERPINC1P01008 464 aa13.57□□□□□ -0.24
RD3-201ENST00000367002 CCDC57Q2TAC2 916 aa13.57□□□□□ -0.24
RD3-201ENST00000367002 PTPRCP08575 1304 aa13.57□□□□□ -0.24
RD3-201ENST00000367002 NUP153P49790 1475 aaKnown RBP13.57□□□□□ -0.24
RD3-201ENST00000367002 CAMK4Q16566 473 aa13.57□□□□□ -0.24
RD3-201ENST00000367002 HSP90B2PQ58FF3 399 aa13.57□□□□□ -0.24
RD3-201ENST00000367002 USHBP1Q8N6Y0 703 aa13.57□□□□□ -0.24
RD3-201ENST00000367002 STK11IPQ8N1F8 1099 aa13.56□□□□□ -0.24
RD3-201ENST00000367002 SPG7Q9UQ90 795 aa13.56□□□□□ -0.24
RD3-201ENST00000367002 ATP10BO94823 1461 aa13.56□□□□□ -0.24
RD3-201ENST00000367002 FAM135AQ9P2D6 1515 aa13.56□□□□□ -0.24
RD3-201ENST00000367002 KLHL40Q2TBA0 621 aa13.56□□□□□ -0.24
RD3-201ENST00000367002 TTC22Q5TAA0 569 aa13.56□□□□□ -0.24
RD3-201ENST00000367002 STRN4Q9NRL3 753 aa13.56□□□□□ -0.24
RD3-201ENST00000367002 LIMCH1Q9UPQ0 1083 aa13.56□□□□□ -0.24
RD3-201ENST00000367002 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
RD3-201ENST00000367002 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
RD3-201ENST00000367002 NCBP3Q53F19 620 aaKnown RBP13.56□□□□□ -0.24
RD3-201ENST00000367002 CEP57L1Q8IYX8 460 aa13.56□□□□□ -0.24
RD3-201ENST00000367002 KIF6Q6ZMV9 814 aa13.56□□□□□ -0.24
RD3-201ENST00000367002 DNAAF4Q8WXU2 420 aa13.56□□□□□ -0.24
RD3-201ENST00000367002 MEIS3Q99687 375 aa13.56□□□□□ -0.24
RD3-201ENST00000367002 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.56□□□□□ -0.24
RD3-201ENST00000367002 ASXL1Q8IXJ9 1541 aa13.55□□□□□ -0.24
RD3-201ENST00000367002 CCDC8Q9H0W5 538 aaPredicted RBP13.55□□□□□ -0.24
RD3-201ENST00000367002 SDSP20132 328 aa13.55□□□□□ -0.24
RD3-201ENST00000367002 USP25Q9UHP3 1055 aa13.55□□□□□ -0.24
RD3-201ENST00000367002 PANK2Q9BZ23 570 aa13.55□□□□□ -0.24
RD3-201ENST00000367002 POLR3AO14802 1390 aaPredicted RBP13.55□□□□□ -0.24
RD3-201ENST00000367002 CCDC183Q5T5S1 534 aa13.54□□□□□ -0.24
RD3-201ENST00000367002 TOM1L2Q6ZVM7 507 aa13.54□□□□□ -0.24
RD3-201ENST00000367002 CCDC85AQ96PX6 553 aaPredicted RBP13.54□□□□□ -0.24
RD3-201ENST00000367002 NAP1L1P55209 391 aaKnown RBP13.54□□□□□ -0.24
RD3-201ENST00000367002 FILIP1LQ4L180 1135 aa13.54□□□□□ -0.24
RD3-201ENST00000367002 TRIM22Q8IYM9 498 aa13.54□□□□□ -0.24
RD3-201ENST00000367002 SCAND2PQ9GZW5 306 aaPredicted RBP13.54□□□□□ -0.24
RD3-201ENST00000367002 CTNNA3Q9UI47 895 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms