RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 TNNT2P45379 298 aaPredicted RBP20.96■□□□□ 0.95
PRKN-203ENST00000366894 AMER1Q5JTC6 1135 aaPredicted RBP20.96■□□□□ 0.95
PRKN-203ENST00000366894 NPC1L1Q9UHC9 1359 aa20.96■□□□□ 0.95
PRKN-203ENST00000366894 PTF1AQ7RTS3 328 aa20.95■□□□□ 0.94
PRKN-203ENST00000366894 MEGF6O75095 1541 aa20.94■□□□□ 0.94
PRKN-203ENST00000366894 USHBP1Q8N6Y0 703 aa20.94■□□□□ 0.94
PRKN-203ENST00000366894 SMG6Q86US8 1419 aaKnown RBP20.94■□□□□ 0.94
PRKN-203ENST00000366894 ZNF316A6NFI3 1004 aaPredicted RBP20.93■□□□□ 0.94
PRKN-203ENST00000366894 PPM1GO15355 546 aaPredicted RBP20.93■□□□□ 0.94
PRKN-203ENST00000366894 PLSCR1O15162 318 aa20.92■□□□□ 0.94
PRKN-203ENST00000366894 CASZ1Q86V15 1759 aa20.92■□□□□ 0.94
PRKN-203ENST00000366894 NCAPD2Q15021 1401 aa20.91■□□□□ 0.94
PRKN-203ENST00000366894 SHANK3Q9BYB0 1731 aa20.91■□□□□ 0.94
PRKN-203ENST00000366894 BCL11BQ9C0K0 894 aaPredicted RBP20.9■□□□□ 0.94
PRKN-203ENST00000366894 ANO8Q9HCE9 1232 aaPredicted RBP20.9■□□□□ 0.94
PRKN-203ENST00000366894 CC2D1BQ5T0F9 858 aaKnown RBP20.88■□□□□ 0.93
PRKN-203ENST00000366894 DDX10Q13206 875 aaKnown RBP20.87■□□□□ 0.93
PRKN-203ENST00000366894 PROM2Q8N271 834 aa20.87■□□□□ 0.93
PRKN-203ENST00000366894 NHSQ6T4R5 1651 aa20.86■□□□□ 0.93
PRKN-203ENST00000366894 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
PRKN-203ENST00000366894 ZCRB1Q8TBF4 217 aaKnown RBP20.86■□□□□ 0.93
PRKN-203ENST00000366894 DDX54Q8TDD1 881 aaKnown RBP20.86■□□□□ 0.93
PRKN-203ENST00000366894 EYA1Q99502 592 aa20.86■□□□□ 0.93
PRKN-203ENST00000366894 ACSBG1Q96GR2 724 aa20.84■□□□□ 0.93
PRKN-203ENST00000366894 ZBTB7AO95365 584 aa20.83■□□□□ 0.93
PRKN-203ENST00000366894 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.93
PRKN-203ENST00000366894 TATP17735 454 aaPredicted RBP20.82■□□□□ 0.92
PRKN-203ENST00000366894 RALBP1Q15311 655 aa20.81■□□□□ 0.92
PRKN-203ENST00000366894 CFAP53Q96M91 514 aa20.81■□□□□ 0.92
PRKN-203ENST00000366894 PDGFDQ9GZP0 370 aaPredicted RBP20.81■□□□□ 0.92
PRKN-203ENST00000366894 STK32BQ9NY57 414 aa20.81■□□□□ 0.92
PRKN-203ENST00000366894 PKD1L3Q7Z443 1732 aa20.81■□□□□ 0.92
PRKN-203ENST00000366894 PTGER2P43116 358 aa20.8■□□□□ 0.92
PRKN-203ENST00000366894 IGSF1Q8N6C5 1336 aa20.79■□□□□ 0.92
PRKN-203ENST00000366894 DOT1LQ8TEK3 1739 aa20.78■□□□□ 0.92
PRKN-203ENST00000366894 BTAF1O14981 1849 aa20.78■□□□□ 0.92
PRKN-203ENST00000366894 MTHFSP49914 203 aa20.78■□□□□ 0.92
PRKN-203ENST00000366894 TXNRD1Q16881 649 aa20.78■□□□□ 0.92
PRKN-203ENST00000366894 UTRNP46939 3433 aa20.77■□□□□ 0.92
PRKN-203ENST00000366894 CYP27B1O15528 508 aa20.77■□□□□ 0.92
PRKN-203ENST00000366894 CNGB1Q14028 1251 aaPredicted RBP20.77■□□□□ 0.92
PRKN-203ENST00000366894 ATF5Q9Y2D1 282 aaPredicted RBP20.77■□□□□ 0.92
PRKN-203ENST00000366894 IL13P35225 146 aa20.76■□□□□ 0.91
PRKN-203ENST00000366894 SLC15A2Q16348 729 aa20.76■□□□□ 0.91
PRKN-203ENST00000366894 PCDH11XQ9BZA7 1347 aa20.76■□□□□ 0.91
PRKN-203ENST00000366894 PCDH11YQ9BZA8 1340 aa20.76■□□□□ 0.91
PRKN-203ENST00000366894 PRIM1P49642 420 aaKnown RBP20.75■□□□□ 0.91
PRKN-203ENST00000366894 ZNF784Q8NCA9 323 aaPredicted RBP20.75■□□□□ 0.91
PRKN-203ENST00000366894 MTFR1LQ9H019 292 aa20.75■□□□□ 0.91
PRKN-203ENST00000366894 FHDC1Q9C0D6 1143 aaPredicted RBP20.74■□□□□ 0.91
PRKN-203ENST00000366894 NUDCQ9Y266 331 aa20.74■□□□□ 0.91
PRKN-203ENST00000366894 KAT6BQ8WYB5 2073 aa20.73■□□□□ 0.91
PRKN-203ENST00000366894 SYT17Q9BSW7 474 aa20.73■□□□□ 0.91
PRKN-203ENST00000366894 DIAPH1O60610 1272 aaKnown RBP20.72■□□□□ 0.91
PRKN-203ENST00000366894 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
PRKN-203ENST00000366894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.72■□□□□ 0.91
PRKN-203ENST00000366894 TOGARAM1Q9Y4F4 1720 aa20.72■□□□□ 0.91
PRKN-203ENST00000366894 PLEKHG2Q9H7P9 1386 aa20.71■□□□□ 0.91
PRKN-203ENST00000366894 COL3A1P02461 1466 aaPredicted RBP20.7■□□□□ 0.9
PRKN-203ENST00000366894 NKX1-1Q15270 411 aaPredicted RBP20.7■□□□□ 0.9
PRKN-203ENST00000366894 SYTL4Q96C24 671 aaPredicted RBP20.7■□□□□ 0.9
PRKN-203ENST00000366894 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
PRKN-203ENST00000366894 KDRP35968 1356 aa20.7■□□□□ 0.9
PRKN-203ENST00000366894 PPP2R1AP30153 589 aa20.69■□□□□ 0.9
PRKN-203ENST00000366894 PAPPAQ13219 1627 aa20.68■□□□□ 0.9
PRKN-203ENST00000366894 SGIP1Q9BQI5 828 aa20.68■□□□□ 0.9
PRKN-203ENST00000366894 CHD4Q14839 1912 aa20.67■□□□□ 0.9
PRKN-203ENST00000366894 PHKG2P15735 406 aa20.67■□□□□ 0.9
PRKN-203ENST00000366894 SULT6B1Q6IMI4 303 aa20.67■□□□□ 0.9
PRKN-203ENST00000366894 LRRC4BQ9NT99 713 aa20.67■□□□□ 0.9
PRKN-203ENST00000366894 ARXQ96QS3 562 aa20.66■□□□□ 0.9
PRKN-203ENST00000366894 PNNQ9H307 717 aaKnown RBP20.66■□□□□ 0.9
PRKN-203ENST00000366894 MAP3K5Q99683 1374 aa20.66■□□□□ 0.9
PRKN-203ENST00000366894 LY75O60449 1722 aa20.66■□□□□ 0.9
PRKN-203ENST00000366894 ITGB4P16144 1822 aa20.65■□□□□ 0.9
PRKN-203ENST00000366894 ANP32CO43423 234 aa20.65■□□□□ 0.9
PRKN-203ENST00000366894 AMOTQ4VCS5 1084 aa20.65■□□□□ 0.9
PRKN-203ENST00000366894 IFNL2Q8IZJ0 200 aa20.65■□□□□ 0.9
PRKN-203ENST00000366894 MYBBP1AQ9BQG0 1328 aaKnown RBP20.63■□□□□ 0.89
PRKN-203ENST00000366894 SENP3-EIF4A1A0A087X0R7 540 aa20.63■□□□□ 0.89
PRKN-203ENST00000366894 NEFMP07197 916 aa20.63■□□□□ 0.89
PRKN-203ENST00000366894 PLEKHO1Q53GL0 409 aaPredicted RBP20.63■□□□□ 0.89
PRKN-203ENST00000366894 MPRIPQ6WCQ1 1025 aa20.62■□□□□ 0.89
PRKN-203ENST00000366894 HMOX1P09601 288 aa20.61■□□□□ 0.89
PRKN-203ENST00000366894 KCNQ4P56696 695 aa20.61■□□□□ 0.89
PRKN-203ENST00000366894 SLC27A3Q5K4L6 730 aa20.61■□□□□ 0.89
PRKN-203ENST00000366894 PIGBQ92521 554 aa20.61■□□□□ 0.89
PRKN-203ENST00000366894 PRKRIP1Q9H875 184 aaPredicted RBP20.61■□□□□ 0.89
PRKN-203ENST00000366894 U2SURPO15042 1029 aaKnown RBP20.6■□□□□ 0.89
PRKN-203ENST00000366894 HMGB2P26583 209 aaKnown RBP20.6■□□□□ 0.89
PRKN-203ENST00000366894 C1QTNF8P60827 252 aa20.6■□□□□ 0.89
PRKN-203ENST00000366894 ZNF827Q17R98 1081 aa20.6■□□□□ 0.89
PRKN-203ENST00000366894 ZNF530Q6P9A1 599 aaPredicted RBP20.6■□□□□ 0.89
PRKN-203ENST00000366894 KDM6AO15550 1401 aaPredicted RBP20.6■□□□□ 0.89
PRKN-203ENST00000366894 HSP90AB1P08238 724 aaKnown RBP20.59■□□□□ 0.89
PRKN-203ENST00000366894 GPR162Q16538 588 aa20.57■□□□□ 0.88
PRKN-203ENST00000366894 AKT1S1Q96B36 256 aa20.57■□□□□ 0.88
PRKN-203ENST00000366894 PALLDQ8WX93 1383 aa20.57■□□□□ 0.88
PRKN-203ENST00000366894 FCHSD2O94868 740 aa20.56■□□□□ 0.88
PRKN-203ENST00000366894 DCAF5Q96JK2 942 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms