RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 NUP188Q5SRE5 1749 aa23.19■■□□□ 1.3
PRKN-202ENST00000366892 RGPD3A6NKT7 1758 aaPredicted RBP23.17■■□□□ 1.3
PRKN-202ENST00000366892 RGPD4Q7Z3J3 1758 aa23.17■■□□□ 1.3
PRKN-202ENST00000366892 TATP17735 454 aaPredicted RBP23.17■■□□□ 1.3
PRKN-202ENST00000366892 KNSTRNQ9Y448 316 aa23.16■■□□□ 1.3
PRKN-202ENST00000366892 NHSQ6T4R5 1651 aa23.15■■□□□ 1.3
PRKN-202ENST00000366892 ZNF316A6NFI3 1004 aaPredicted RBP23.15■■□□□ 1.3
PRKN-202ENST00000366892 ANO8Q9HCE9 1232 aaPredicted RBP23.15■■□□□ 1.3
PRKN-202ENST00000366892 NSD2O96028 1365 aa23.15■■□□□ 1.3
PRKN-202ENST00000366892 KAT6BQ8WYB5 2073 aa23.14■■□□□ 1.29
PRKN-202ENST00000366892 MAP2P11137 1827 aaKnown RBP23.14■■□□□ 1.29
PRKN-202ENST00000366892 PRIM1P49642 420 aaKnown RBP23.13■■□□□ 1.29
PRKN-202ENST00000366892 MORC1Q86VD1 984 aa23.13■■□□□ 1.29
PRKN-202ENST00000366892 EYA1Q99502 592 aa23.13■■□□□ 1.29
PRKN-202ENST00000366892 SYTL4Q96C24 671 aaPredicted RBP23.12■■□□□ 1.29
PRKN-202ENST00000366892 ANKRD26Q9UPS8 1709 aa23.11■■□□□ 1.29
PRKN-202ENST00000366892 LRP5O75197 1615 aa23.11■■□□□ 1.29
PRKN-202ENST00000366892 EIF4A2Q14240 407 aaKnown RBP23.11■■□□□ 1.29
PRKN-202ENST00000366892 AMER1Q5JTC6 1135 aaPredicted RBP23.1■■□□□ 1.29
PRKN-202ENST00000366892 SHANK3Q9BYB0 1731 aa23.09■■□□□ 1.29
PRKN-202ENST00000366892 NCAPD2Q15021 1401 aa23.09■■□□□ 1.29
PRKN-202ENST00000366892 PER1O15534 1290 aaPredicted RBP23.08■■□□□ 1.29
PRKN-202ENST00000366892 PCDH11XQ9BZA7 1347 aa23.08■■□□□ 1.29
PRKN-202ENST00000366892 PCDH11YQ9BZA8 1340 aa23.08■■□□□ 1.29
PRKN-202ENST00000366892 CYP27B1O15528 508 aa23.08■■□□□ 1.28
PRKN-202ENST00000366892 SLC15A2Q16348 729 aa23.08■■□□□ 1.28
PRKN-202ENST00000366892 STK32BQ9NY57 414 aa23.08■■□□□ 1.28
PRKN-202ENST00000366892 BTAF1O14981 1849 aa23.07■■□□□ 1.28
PRKN-202ENST00000366892 LRRC4BQ9NT99 713 aa23.07■■□□□ 1.28
PRKN-202ENST00000366892 PDGFDQ9GZP0 370 aaPredicted RBP23.06■■□□□ 1.28
PRKN-202ENST00000366892 DIEXFQ68CQ4 756 aaKnown RBP23.03■■□□□ 1.28
PRKN-202ENST00000366892 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.03■■□□□ 1.28
PRKN-202ENST00000366892 SPG7Q9UQ90 795 aa23.03■■□□□ 1.28
PRKN-202ENST00000366892 SLC27A3Q5K4L6 730 aa23.03■■□□□ 1.28
PRKN-202ENST00000366892 SPON1Q9HCB6 807 aa23.03■■□□□ 1.28
PRKN-202ENST00000366892 IGSF1Q8N6C5 1336 aa23.01■■□□□ 1.27
PRKN-202ENST00000366892 DOT1LQ8TEK3 1739 aa23.01■■□□□ 1.27
PRKN-202ENST00000366892 NKX1-1Q15270 411 aaPredicted RBP23■■□□□ 1.27
PRKN-202ENST00000366892 KCNQ4P56696 695 aa22.99■■□□□ 1.27
PRKN-202ENST00000366892 MPRIPQ6WCQ1 1025 aa22.99■■□□□ 1.27
PRKN-202ENST00000366892 ZNF827Q17R98 1081 aa22.98■■□□□ 1.27
PRKN-202ENST00000366892 CC2D1BQ5T0F9 858 aaKnown RBP22.98■■□□□ 1.27
PRKN-202ENST00000366892 ZBTB7AO95365 584 aa22.98■■□□□ 1.27
PRKN-202ENST00000366892 IFNL2Q8IZJ0 200 aa22.97■■□□□ 1.27
PRKN-202ENST00000366892 AKT1S1Q96B36 256 aa22.97■■□□□ 1.27
PRKN-202ENST00000366892 PKD1L3Q7Z443 1732 aa22.96■■□□□ 1.27
PRKN-202ENST00000366892 PHKG2P15735 406 aa22.96■■□□□ 1.27
PRKN-202ENST00000366892 CCNL1Q9UK58 526 aaPredicted RBP22.96■■□□□ 1.27
PRKN-202ENST00000366892 PAPPAQ13219 1627 aa22.95■■□□□ 1.26
PRKN-202ENST00000366892 IL13P35225 146 aa22.95■■□□□ 1.26
PRKN-202ENST00000366892 MTHFSP49914 203 aa22.95■■□□□ 1.26
PRKN-202ENST00000366892 CASZ1Q86V15 1759 aa22.95■■□□□ 1.26
PRKN-202ENST00000366892 ATF5Q9Y2D1 282 aaPredicted RBP22.94■■□□□ 1.26
PRKN-202ENST00000366892 AEBP1Q8IUX7 1158 aa22.93■■□□□ 1.26
PRKN-202ENST00000366892 PIGBQ92521 554 aa22.93■■□□□ 1.26
PRKN-202ENST00000366892 PPP1R1BQ9UD71 204 aaPredicted RBP22.93■■□□□ 1.26
PRKN-202ENST00000366892 PLEKHG2Q9H7P9 1386 aa22.93■■□□□ 1.26
PRKN-202ENST00000366892 NPC1L1Q9UHC9 1359 aa22.92■■□□□ 1.26
PRKN-202ENST00000366892 PTGER2P43116 358 aa22.92■■□□□ 1.26
PRKN-202ENST00000366892 PLEKHO1Q53GL0 409 aaPredicted RBP22.92■■□□□ 1.26
PRKN-202ENST00000366892 SULT6B1Q6IMI4 303 aa22.92■■□□□ 1.26
PRKN-202ENST00000366892 MTFR1LQ9H019 292 aa22.92■■□□□ 1.26
PRKN-202ENST00000366892 CNGB1Q14028 1251 aaPredicted RBP22.91■■□□□ 1.26
PRKN-202ENST00000366892 LY75O60449 1722 aa22.9■■□□□ 1.26
PRKN-202ENST00000366892 TFCP2L1Q9NZI6 479 aa22.9■■□□□ 1.26
PRKN-202ENST00000366892 PALLDQ8WX93 1383 aa22.89■■□□□ 1.26
PRKN-202ENST00000366892 AMOTQ4VCS5 1084 aa22.89■■□□□ 1.26
PRKN-202ENST00000366892 SMARCC1Q92922 1105 aaPredicted RBP22.89■■□□□ 1.26
PRKN-202ENST00000366892 TOGARAM1Q9Y4F4 1720 aa22.89■■□□□ 1.25
PRKN-202ENST00000366892 TMOD3Q9NYL9 352 aa22.88■■□□□ 1.25
PRKN-202ENST00000366892 KDRP35968 1356 aa22.88■■□□□ 1.25
PRKN-202ENST00000366892 PNPLA7Q6ZV29 1317 aa22.87■■□□□ 1.25
PRKN-202ENST00000366892 HSP90AB1P08238 724 aaKnown RBP22.86■■□□□ 1.25
PRKN-202ENST00000366892 ZNF530Q6P9A1 599 aaPredicted RBP22.86■■□□□ 1.25
PRKN-202ENST00000366892 SGIP1Q9BQI5 828 aa22.86■■□□□ 1.25
PRKN-202ENST00000366892 ITGB4P16144 1822 aa22.85■■□□□ 1.25
PRKN-202ENST00000366892 DCAF5Q96JK2 942 aa22.85■■□□□ 1.25
PRKN-202ENST00000366892 ERVV-2B6SEH9 535 aa22.84■■□□□ 1.25
PRKN-202ENST00000366892 DIAPH1O60610 1272 aaKnown RBP22.84■■□□□ 1.25
PRKN-202ENST00000366892 SLC16A10Q8TF71 515 aa22.84■■□□□ 1.25
PRKN-202ENST00000366892 ASAP1Q9ULH1 1129 aa22.84■■□□□ 1.25
PRKN-202ENST00000366892 HMGB2P26583 209 aaKnown RBP22.83■■□□□ 1.25
PRKN-202ENST00000366892 HMOX1P09601 288 aa22.82■■□□□ 1.24
PRKN-202ENST00000366892 ATG3Q9NT62 314 aa22.82■■□□□ 1.24
PRKN-202ENST00000366892 LOC102724428A0A0B4J2F2 783 aa22.81■■□□□ 1.24
PRKN-202ENST00000366892 SIK1P57059 783 aa22.81■■□□□ 1.24
PRKN-202ENST00000366892 C1orf141Q5JVX7 400 aa22.81■■□□□ 1.24
PRKN-202ENST00000366892 COL23A1Q86Y22 540 aaPredicted RBP22.8■■□□□ 1.24
PRKN-202ENST00000366892 KDM6AO15550 1401 aaPredicted RBP22.79■■□□□ 1.24
PRKN-202ENST00000366892 CABP4P57796 275 aa22.78■■□□□ 1.24
PRKN-202ENST00000366892 ARXQ96QS3 562 aa22.78■■□□□ 1.24
PRKN-202ENST00000366892 UTRNP46939 3433 aa22.78■■□□□ 1.24
PRKN-202ENST00000366892 QSER1Q2KHR3 1735 aa22.77■■□□□ 1.24
PRKN-202ENST00000366892 MSH5O43196 834 aa22.77■■□□□ 1.24
PRKN-202ENST00000366892 ATP6V1AP38606 617 aa22.77■■□□□ 1.24
PRKN-202ENST00000366892 SYT17Q9BSW7 474 aa22.77■■□□□ 1.24
PRKN-202ENST00000366892 FHDC1Q9C0D6 1143 aaPredicted RBP22.77■■□□□ 1.24
PRKN-202ENST00000366892 ITPK1Q13572 414 aa22.76■■□□□ 1.23
PRKN-202ENST00000366892 AKAP4Q5JQC9 854 aa22.76■■□□□ 1.23
PRKN-202ENST00000366892 LINC00116Q8NCU8 138 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms