RNA–Protein interactions for RNA: ENST00000366888.6

PACRG-202, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-202ENST00000366888 GOLGB1Q14789 3259 aaKnown RBP11.35□□□□□ -0.59
PACRG-202ENST00000366888 TAF1LQ8IZX4 1826 aa11.35□□□□□ -0.59
PACRG-202ENST00000366888 MEGF6O75095 1541 aa11.34□□□□□ -0.59
PACRG-202ENST00000366888 NSD2O96028 1365 aa11.34□□□□□ -0.59
PACRG-202ENST00000366888 PRIM1P49642 420 aaKnown RBP11.34□□□□□ -0.59
PACRG-202ENST00000366888 IP6K1Q92551 441 aa11.34□□□□□ -0.59
PACRG-202ENST00000366888 TERF2IPQ9NYB0 399 aa11.34□□□□□ -0.59
PACRG-202ENST00000366888 KIF20BQ96Q89 1820 aa11.34□□□□□ -0.59
PACRG-202ENST00000366888 ANKRD36BQ8N2N9 1353 aa11.33□□□□□ -0.6
PACRG-202ENST00000366888 MAP3K19Q56UN5 1328 aa11.33□□□□□ -0.6
PACRG-202ENST00000366888 C1QTNF8P60827 252 aa11.33□□□□□ -0.6
PACRG-202ENST00000366888 NLGN2Q8NFZ4 835 aa11.33□□□□□ -0.6
PACRG-202ENST00000366888 TFCP2L1Q9NZI6 479 aa11.33□□□□□ -0.6
PACRG-202ENST00000366888 ITGB4P16144 1822 aa11.33□□□□□ -0.6
PACRG-202ENST00000366888 POLD1P28340 1107 aa11.32□□□□□ -0.6
PACRG-202ENST00000366888 SLC27A3Q5K4L6 730 aa11.32□□□□□ -0.6
PACRG-202ENST00000366888 TOGARAM1Q9Y4F4 1720 aa11.32□□□□□ -0.6
PACRG-202ENST00000366888 HOXC9P31274 260 aa11.31□□□□□ -0.6
PACRG-202ENST00000366888 USHBP1Q8N6Y0 703 aa11.31□□□□□ -0.6
PACRG-202ENST00000366888 SLC16A10Q8TF71 515 aa11.31□□□□□ -0.6
PACRG-202ENST00000366888 TONSLQ96HA7 1378 aa11.31□□□□□ -0.6
PACRG-202ENST00000366888 AMPHP49418 695 aa11.3□□□□□ -0.6
PACRG-202ENST00000366888 ZCRB1Q8TBF4 217 aaKnown RBP11.3□□□□□ -0.6
PACRG-202ENST00000366888 COG3Q96JB2 828 aa11.3□□□□□ -0.6
PACRG-202ENST00000366888 CCNL1Q9UK58 526 aaPredicted RBP11.3□□□□□ -0.6
PACRG-202ENST00000366888 RRS1Q15050 365 aaKnown RBP11.29□□□□□ -0.6
PACRG-202ENST00000366888 MSL1Q68DK7 614 aa11.29□□□□□ -0.6
PACRG-202ENST00000366888 ST20-MTHFSA0A0A6YYL1 179 aa11.28□□□□□ -0.6
PACRG-202ENST00000366888 GIGYF1O75420 1035 aaPredicted RBP11.28□□□□□ -0.6
PACRG-202ENST00000366888 YBX3P16989 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
PACRG-202ENST00000366888 COL23A1Q86Y22 540 aaPredicted RBP11.28□□□□□ -0.6
PACRG-202ENST00000366888 TESK2Q96S53 571 aa11.28□□□□□ -0.6
PACRG-202ENST00000366888 UBR3Q6ZT12 1888 aa11.28□□□□□ -0.6
PACRG-202ENST00000366888 NBPF6Q5VWK0 638 aa11.28□□□□□ -0.6
PACRG-202ENST00000366888 NBPF4Q96M43 638 aa11.28□□□□□ -0.6
PACRG-202ENST00000366888 C4BP0C0L5 1744 aa11.27□□□□□ -0.6
PACRG-202ENST00000366888 USP47Q96K76 1375 aa11.27□□□□□ -0.6
PACRG-202ENST00000366888 PKD1L3Q7Z443 1732 aa11.27□□□□□ -0.61
PACRG-202ENST00000366888 PUS7Q96PZ0 661 aaKnown RBP11.27□□□□□ -0.61
PACRG-202ENST00000366888 GGNBP2Q9H3C7 697 aa11.27□□□□□ -0.61
PACRG-202ENST00000366888 RTL1A6NKG5 1358 aa11.26□□□□□ -0.61
PACRG-202ENST00000366888 CEP350Q5VT06 3117 aa11.25□□□□□ -0.61
PACRG-202ENST00000366888 MAP2P11137 1827 aaKnown RBP11.25□□□□□ -0.61
PACRG-202ENST00000366888 SMG6Q86US8 1419 aaKnown RBP11.24□□□□□ -0.61
PACRG-202ENST00000366888 FYB1O15117 783 aa11.24□□□□□ -0.61
PACRG-202ENST00000366888 HSP90AB2PQ58FF8 381 aa11.24□□□□□ -0.61
PACRG-202ENST00000366888 SMIM5Q71RC9 77 aa11.24□□□□□ -0.61
PACRG-202ENST00000366888 RAPGEF4Q8WZA2 1011 aa11.24□□□□□ -0.61
PACRG-202ENST00000366888 PALLDQ8WX93 1383 aa11.24□□□□□ -0.61
PACRG-202ENST00000366888 ATP10DQ9P241 1426 aa11.23□□□□□ -0.61
PACRG-202ENST00000366888 TATP17735 454 aaPredicted RBP11.23□□□□□ -0.61
PACRG-202ENST00000366888 MPRIPQ6WCQ1 1025 aa11.23□□□□□ -0.61
PACRG-202ENST00000366888 WWC3Q9ULE0 1092 aa11.23□□□□□ -0.61
PACRG-202ENST00000366888 ANKRD26Q9UPS8 1709 aa11.23□□□□□ -0.61
PACRG-202ENST00000366888 AMIGO3Q86WK7 504 aa11.22□□□□□ -0.61
PACRG-202ENST00000366888 CGNL1Q0VF96 1302 aa11.22□□□□□ -0.61
PACRG-202ENST00000366888 PCDH11XQ9BZA7 1347 aa11.22□□□□□ -0.61
PACRG-202ENST00000366888 PCDH11YQ9BZA8 1340 aa11.22□□□□□ -0.61
PACRG-202ENST00000366888 INSRP06213 1382 aa11.21□□□□□ -0.61
PACRG-202ENST00000366888 CYP27B1O15528 508 aa11.21□□□□□ -0.61
PACRG-202ENST00000366888 GRIN3BO60391 1043 aa11.21□□□□□ -0.61
PACRG-202ENST00000366888 FLT4P35916 1363 aa11.2□□□□□ -0.62
PACRG-202ENST00000366888 N4BP2Q86UW6 1770 aaPredicted RBP11.2□□□□□ -0.62
PACRG-202ENST00000366888 PHF14O94880 888 aa11.2□□□□□ -0.62
PACRG-202ENST00000366888 ZNF526Q8TF50 670 aaPredicted RBP11.2□□□□□ -0.62
PACRG-202ENST00000366888 EMILIN1Q9Y6C2 1016 aa11.19□□□□□ -0.62
PACRG-202ENST00000366888 KIAA1551Q9HCM1 1747 aa11.19□□□□□ -0.62
PACRG-202ENST00000366888 TMF1P82094 1093 aa11.18□□□□□ -0.62
PACRG-202ENST00000366888 AK7Q96M32 723 aa11.18□□□□□ -0.62
PACRG-202ENST00000366888 CD2APQ9Y5K6 639 aa11.18□□□□□ -0.62
PACRG-202ENST00000366888 ADCY9O60503 1353 aa11.18□□□□□ -0.62
PACRG-202ENST00000366888 NSD3Q9BZ95 1437 aa11.18□□□□□ -0.62
PACRG-202ENST00000366888 KIF13BQ9NQT8 1826 aa11.17□□□□□ -0.62
PACRG-202ENST00000366888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.17□□□□□ -0.62
PACRG-202ENST00000366888 PPM1GO15355 546 aaPredicted RBP11.17□□□□□ -0.62
PACRG-202ENST00000366888 PIGBQ92521 554 aa11.17□□□□□ -0.62
PACRG-202ENST00000366888 IGSF1Q8N6C5 1336 aa11.17□□□□□ -0.62
PACRG-202ENST00000366888 LINC00116Q8NCU8 138 aa11.16□□□□□ -0.62
PACRG-202ENST00000366888 FLAD1Q8NFF5 587 aa11.16□□□□□ -0.62
PACRG-202ENST00000366888 CARD14Q9BXL6 1004 aa11.16□□□□□ -0.62
PACRG-202ENST00000366888 GPBP1L1Q9HC44 474 aaPredicted RBP11.16□□□□□ -0.62
PACRG-202ENST00000366888 NCAPD2Q15021 1401 aa11.16□□□□□ -0.62
PACRG-202ENST00000366888 SLC24A1O60721 1099 aa11.16□□□□□ -0.62
PACRG-202ENST00000366888 SMARCC1Q92922 1105 aaPredicted RBP11.16□□□□□ -0.62
PACRG-202ENST00000366888 KIF24Q5T7B8 1368 aa11.15□□□□□ -0.62
PACRG-202ENST00000366888 C4AP0C0L4 1744 aa11.15□□□□□ -0.62
PACRG-202ENST00000366888 COL5A3P25940 1745 aaPredicted RBP11.15□□□□□ -0.62
PACRG-202ENST00000366888 BRCA1P38398 1863 aaKnown RBP11.15□□□□□ -0.62
PACRG-202ENST00000366888 LOC102724428A0A0B4J2F2 783 aa11.15□□□□□ -0.63
PACRG-202ENST00000366888 SIK1P57059 783 aa11.15□□□□□ -0.63
PACRG-202ENST00000366888 ITPK1Q13572 414 aa11.15□□□□□ -0.63
PACRG-202ENST00000366888 CICQ96RK0 1608 aaPredicted RBP11.14□□□□□ -0.63
PACRG-202ENST00000366888 GNPATO15228 680 aa11.14□□□□□ -0.63
PACRG-202ENST00000366888 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
PACRG-202ENST00000366888 ASAP1Q9ULH1 1129 aa11.14□□□□□ -0.63
PACRG-202ENST00000366888 MYH14Q7Z406 1995 aaKnown RBP11.13□□□□□ -0.63
PACRG-202ENST00000366888 NKX1-1Q15270 411 aaPredicted RBP11.13□□□□□ -0.63
PACRG-202ENST00000366888 EYA1Q99502 592 aa11.13□□□□□ -0.63
PACRG-202ENST00000366888 TMOD3Q9NYL9 352 aa11.13□□□□□ -0.63
PACRG-202ENST00000366888 SPG7Q9UQ90 795 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms