RNA–Protein interactions for RNA: ENST00000366856.3

CNIH4-201, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH4, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-201ENST00000366856 ADD1P35611 737 aaKnown RBP8.47□□□□□ -1.05
CNIH4-201ENST00000366856 USP4Q13107 963 aa8.47□□□□□ -1.05
CNIH4-201ENST00000366856 TRAF7Q6Q0C0 670 aa8.47□□□□□ -1.05
CNIH4-201ENST00000366856 KLF16Q9BXK1 252 aaPredicted RBP8.47□□□□□ -1.05
CNIH4-201ENST00000366856 NOD1Q9Y239 953 aa8.47□□□□□ -1.05
CNIH4-201ENST00000366856 LILRA1O75019 489 aa8.46□□□□□ -1.06
CNIH4-201ENST00000366856 AVPP01185 164 aa8.46□□□□□ -1.06
CNIH4-201ENST00000366856 ERVK-9P63128 1117 aa8.46□□□□□ -1.06
CNIH4-201ENST00000366856 CTC1Q2NKJ3 1217 aa8.46□□□□□ -1.06
CNIH4-201ENST00000366856 SIRT1Q96EB6 747 aa8.46□□□□□ -1.06
CNIH4-201ENST00000366856 RAB6BQ9NRW1 208 aa8.46□□□□□ -1.06
CNIH4-201ENST00000366856 ATP5J2-PTCD1G3V325 749 aa8.45□□□□□ -1.06
CNIH4-201ENST00000366856 ADH1AP07327 375 aa8.45□□□□□ -1.06
CNIH4-201ENST00000366856 BMP2P12643 396 aa8.45□□□□□ -1.06
CNIH4-201ENST00000366856 CFAP70Q5T0N1 1121 aa8.45□□□□□ -1.06
CNIH4-201ENST00000366856 MEIOBQ8N635 442 aa8.45□□□□□ -1.06
CNIH4-201ENST00000366856 ZNF395Q9H8N7 513 aaPredicted RBP8.45□□□□□ -1.06
CNIH4-201ENST00000366856 AAASQ9NRG9 546 aa8.45□□□□□ -1.06
CNIH4-201ENST00000366856 MKRN1Q9UHC7 482 aaKnown RBP8.45□□□□□ -1.06
CNIH4-201ENST00000366856 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.44□□□□□ -1.06
CNIH4-201ENST00000366856 MEN1O00255 615 aa8.44□□□□□ -1.06
CNIH4-201ENST00000366856 STAU1O95793 577 aaKnown RBP8.44□□□□□ -1.06
CNIH4-201ENST00000366856 GTF2IP78347 998 aa8.44□□□□□ -1.06
CNIH4-201ENST00000366856 CYP2U1Q7Z449 544 aa8.44□□□□□ -1.06
CNIH4-201ENST00000366856 ZNF594Q96JF6 807 aaPredicted RBP8.44□□□□□ -1.06
CNIH4-201ENST00000366856 PURBQ96QR8 312 aaKnown RBP8.44□□□□□ -1.06
CNIH4-201ENST00000366856 OSBPL3Q9H4L5 887 aa8.44□□□□□ -1.06
CNIH4-201ENST00000366856 SCARF1Q14162 830 aa8.43□□□□□ -1.06
CNIH4-201ENST00000366856 MRPL14Q6P1L8 145 aaKnown RBP8.43□□□□□ -1.06
CNIH4-201ENST00000366856 PLEKHM2Q8IWE5 1019 aa8.43□□□□□ -1.06
CNIH4-201ENST00000366856 LINC00528Q8N1L1 170 aa8.43□□□□□ -1.06
CNIH4-201ENST00000366856 ARHGEF10LQ9HCE6 1279 aa8.43□□□□□ -1.06
CNIH4-201ENST00000366856 DACH1Q9UI36 760 aa8.43□□□□□ -1.06
CNIH4-201ENST00000366856 CHIC2Q9UKJ5 165 aa8.43□□□□□ -1.06
CNIH4-201ENST00000366856 RASA1P20936 1047 aa8.42□□□□□ -1.06
CNIH4-201ENST00000366856 Q6ZVU0 165 aa8.42□□□□□ -1.06
CNIH4-201ENST00000366856 TRIM50Q86XT4 487 aa8.42□□□□□ -1.06
CNIH4-201ENST00000366856 TSEN34Q9BSV6 310 aaKnown RBP8.42□□□□□ -1.06
CNIH4-201ENST00000366856 VRTNQ9H8Y1 702 aa8.42□□□□□ -1.06
CNIH4-201ENST00000366856 OGFOD1Q8N543 542 aa8.41□□□□□ -1.06
CNIH4-201ENST00000366856 POLMQ9NP87 494 aaPredicted RBP8.41□□□□□ -1.06
CNIH4-201ENST00000366856 ATP13A2Q9NQ11 1180 aa8.41□□□□□ -1.06
CNIH4-201ENST00000366856 LZTS3O60299 673 aaPredicted RBP8.4□□□□□ -1.06
CNIH4-201ENST00000366856 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.06
CNIH4-201ENST00000366856 ATP1A2P50993 1020 aa8.4□□□□□ -1.06
CNIH4-201ENST00000366856 LARP1Q6PKG0 1096 aaKnown RBP8.4□□□□□ -1.06
CNIH4-201ENST00000366856 TRIM46Q7Z4K8 759 aa8.4□□□□□ -1.06
CNIH4-201ENST00000366856 CRIPAKQ8N1N5 446 aa8.4□□□□□ -1.06
CNIH4-201ENST00000366856 TPCN2Q8NHX9 752 aa8.4□□□□□ -1.06
CNIH4-201ENST00000366856 INSM2Q96T92 566 aaPredicted RBP8.4□□□□□ -1.06
CNIH4-201ENST00000366856 DNAAF2Q9NVR5 837 aaKnown RBP8.4□□□□□ -1.06
CNIH4-201ENST00000366856 RBM19Q9Y4C8 960 aaKnown RBP8.4□□□□□ -1.06
CNIH4-201ENST00000366856 PTGIRP43119 386 aa8.39□□□□□ -1.07
CNIH4-201ENST00000366856 CLDN10P78369 228 aa8.39□□□□□ -1.07
CNIH4-201ENST00000366856 ZFP42Q96MM3 310 aa8.39□□□□□ -1.07
CNIH4-201ENST00000366856 NLRP3Q96P20 1036 aa8.39□□□□□ -1.07
CNIH4-201ENST00000366856 A0A1W2PRU2 124 aa8.38□□□□□ -1.07
CNIH4-201ENST00000366856 CRTC2Q53ET0 693 aaPredicted RBP8.38□□□□□ -1.07
CNIH4-201ENST00000366856 SERTAD1Q9UHV2 236 aa8.38□□□□□ -1.07
CNIH4-201ENST00000366856 KIAA1024Q9UPX6 916 aa8.38□□□□□ -1.07
CNIH4-201ENST00000366856 USP17L15C9J2P7 530 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 USP17L10C9JJH3 530 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 USP17L13C9JLJ4 530 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 USP17L11C9JVI0 530 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 USP17L21D6R901 530 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 USP17L18D6R9N7 530 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 USP17L22D6RA61 530 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 USP17L17D6RBQ6 530 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 USP17L19D6RCP7 530 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 USP17L20D6RJB6 530 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 GNRH1P01148 92 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 GDF10P55107 478 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 USP17L24Q0WX57 530 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 KANK4Q5T7N3 995 aaPredicted RBP8.37□□□□□ -1.07
CNIH4-201ENST00000366856 HOMEZQ8IX15 550 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 ETNK1Q9HBU6 452 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 PCDHGA11Q9Y5H2 935 aa8.37□□□□□ -1.07
CNIH4-201ENST00000366856 FIGNL2A6NMB9 653 aa8.36□□□□□ -1.07
CNIH4-201ENST00000366856 LCE2BO14633 110 aa8.36□□□□□ -1.07
CNIH4-201ENST00000366856 CTSOP43234 321 aaPredicted RBP8.36□□□□□ -1.07
CNIH4-201ENST00000366856 ESCO1Q5FWF5 840 aa8.36□□□□□ -1.07
CNIH4-201ENST00000366856 CCDC102BQ68D86 513 aa8.36□□□□□ -1.07
CNIH4-201ENST00000366856 KDF1Q8NAX2 398 aaPredicted RBP8.36□□□□□ -1.07
CNIH4-201ENST00000366856 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.36□□□□□ -1.07
CNIH4-201ENST00000366856 CNKSR1Q969H4 720 aa8.36□□□□□ -1.07
CNIH4-201ENST00000366856 PBXIP1Q96AQ6 731 aa8.36□□□□□ -1.07
CNIH4-201ENST00000366856 GMPR2Q9P2T1 348 aaKnown RBP8.36□□□□□ -1.07
CNIH4-201ENST00000366856 SLC27A3Q5K4L6 730 aa8.35□□□□□ -1.07
CNIH4-201ENST00000366856 TTLL8A6PVC2 850 aa8.34□□□□□ -1.07
CNIH4-201ENST00000366856 SOBPA7XYQ1 873 aa8.34□□□□□ -1.07
CNIH4-201ENST00000366856 SFI1A8K8P3 1242 aa8.34□□□□□ -1.07
CNIH4-201ENST00000366856 SPINT1O43278 529 aa8.34□□□□□ -1.07
CNIH4-201ENST00000366856 MAN1A2O60476 641 aa8.34□□□□□ -1.07
CNIH4-201ENST00000366856 LGR5O75473 907 aa8.34□□□□□ -1.07
CNIH4-201ENST00000366856 IL2RAP01589 272 aa8.34□□□□□ -1.07
CNIH4-201ENST00000366856 SCNN1DP51172 638 aa8.34□□□□□ -1.07
CNIH4-201ENST00000366856 TLR1Q15399 786 aa8.34□□□□□ -1.07
CNIH4-201ENST00000366856 NOVA2Q9UNW9 492 aaKnown RBP8.34□□□□□ -1.07
CNIH4-201ENST00000366856 C11orf95C9JLR9 678 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms