RNA–Protein interactions for RNA: ENST00000366736.5

MRPL55-210, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-210ENST00000366736 NCAPD2Q15021 1401 aa17.23■□□□□ 0.35
MRPL55-210ENST00000366736 PROM2Q8N271 834 aa17.23■□□□□ 0.35
MRPL55-210ENST00000366736 ZCRB1Q8TBF4 217 aaKnown RBP17.23■□□□□ 0.35
MRPL55-210ENST00000366736 PKD1L3Q7Z443 1732 aa17.22■□□□□ 0.35
MRPL55-210ENST00000366736 ACSBG1Q96GR2 724 aa17.22■□□□□ 0.35
MRPL55-210ENST00000366736 POLKQ9UBT6 870 aa17.22■□□□□ 0.35
MRPL55-210ENST00000366736 USHBP1Q8N6Y0 703 aa17.21■□□□□ 0.35
MRPL55-210ENST00000366736 DDX54Q8TDD1 881 aaKnown RBP17.21■□□□□ 0.35
MRPL55-210ENST00000366736 RAPGEF4Q8WZA2 1011 aa17.21■□□□□ 0.35
MRPL55-210ENST00000366736 TXNRD1Q16881 649 aa17.2■□□□□ 0.34
MRPL55-210ENST00000366736 CASZ1Q86V15 1759 aa17.2■□□□□ 0.34
MRPL55-210ENST00000366736 KIF7Q2M1P5 1343 aa17.2■□□□□ 0.34
MRPL55-210ENST00000366736 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-210ENST00000366736 LY75O60449 1722 aa17.18■□□□□ 0.34
MRPL55-210ENST00000366736 PAPPAQ13219 1627 aa17.18■□□□□ 0.34
MRPL55-210ENST00000366736 PPM1GO15355 546 aaPredicted RBP17.18■□□□□ 0.34
MRPL55-210ENST00000366736 ANO8Q9HCE9 1232 aaPredicted RBP17.18■□□□□ 0.34
MRPL55-210ENST00000366736 ITGB4P16144 1822 aa17.18■□□□□ 0.34
MRPL55-210ENST00000366736 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
MRPL55-210ENST00000366736 PCDH11XQ9BZA7 1347 aa17.16■□□□□ 0.34
MRPL55-210ENST00000366736 PCDH11YQ9BZA8 1340 aa17.16■□□□□ 0.34
MRPL55-210ENST00000366736 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
MRPL55-210ENST00000366736 EYA1Q99502 592 aa17.15■□□□□ 0.34
MRPL55-210ENST00000366736 QSER1Q2KHR3 1735 aa17.15■□□□□ 0.34
MRPL55-210ENST00000366736 PLEKHG2Q9H7P9 1386 aa17.15■□□□□ 0.34
MRPL55-210ENST00000366736 PRIM1P49642 420 aaKnown RBP17.14■□□□□ 0.33
MRPL55-210ENST00000366736 TOGARAM1Q9Y4F4 1720 aa17.13■□□□□ 0.33
MRPL55-210ENST00000366736 EIF4A2Q14240 407 aaKnown RBP17.13■□□□□ 0.33
MRPL55-210ENST00000366736 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
MRPL55-210ENST00000366736 MORC1Q86VD1 984 aa17.13■□□□□ 0.33
MRPL55-210ENST00000366736 STK32BQ9NY57 414 aa17.13■□□□□ 0.33
MRPL55-210ENST00000366736 CYP27B1O15528 508 aa17.12■□□□□ 0.33
MRPL55-210ENST00000366736 SLC15A2Q16348 729 aa17.12■□□□□ 0.33
MRPL55-210ENST00000366736 SLC27A3Q5K4L6 730 aa17.12■□□□□ 0.33
MRPL55-210ENST00000366736 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.12■□□□□ 0.33
MRPL55-210ENST00000366736 SYTL4Q96C24 671 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-210ENST00000366736 SPON1Q9HCB6 807 aa17.11■□□□□ 0.33
MRPL55-210ENST00000366736 TAF1LQ8IZX4 1826 aa17.1■□□□□ 0.33
MRPL55-210ENST00000366736 TUBGCP6Q96RT7 1819 aa17.1■□□□□ 0.33
MRPL55-210ENST00000366736 PER1O15534 1290 aaPredicted RBP17.1■□□□□ 0.33
MRPL55-210ENST00000366736 LRRC4BQ9NT99 713 aa17.1■□□□□ 0.33
MRPL55-210ENST00000366736 IGSF1Q8N6C5 1336 aa17.1■□□□□ 0.33
MRPL55-210ENST00000366736 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-210ENST00000366736 SPG7Q9UQ90 795 aa17.09■□□□□ 0.33
MRPL55-210ENST00000366736 NPC1L1Q9UHC9 1359 aa17.07■□□□□ 0.32
MRPL55-210ENST00000366736 PDGFDQ9GZP0 370 aaPredicted RBP17.06■□□□□ 0.32
MRPL55-210ENST00000366736 C5P01031 1676 aa17.06■□□□□ 0.32
MRPL55-210ENST00000366736 COL24A1Q17RW2 1714 aa17.05■□□□□ 0.32
MRPL55-210ENST00000366736 ZNF827Q17R98 1081 aa17.05■□□□□ 0.32
MRPL55-210ENST00000366736 AKT1S1Q96B36 256 aa17.05■□□□□ 0.32
MRPL55-210ENST00000366736 IFNL2Q8IZJ0 200 aa17.03■□□□□ 0.32
MRPL55-210ENST00000366736 KDRP35968 1356 aa17.02■□□□□ 0.32
MRPL55-210ENST00000366736 ZBTB7AO95365 584 aa17.02■□□□□ 0.32
MRPL55-210ENST00000366736 PHKG2P15735 406 aa17.02■□□□□ 0.32
MRPL55-210ENST00000366736 HMGB2P26583 209 aaKnown RBP17.02■□□□□ 0.32
MRPL55-210ENST00000366736 MPRIPQ6WCQ1 1025 aa17.02■□□□□ 0.32
MRPL55-210ENST00000366736 MTFR1LQ9H019 292 aa17.02■□□□□ 0.32
MRPL55-210ENST00000366736 CCNL1Q9UK58 526 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-210ENST00000366736 VIRMAQ69YN4 1812 aaKnown RBP17.02■□□□□ 0.31
MRPL55-210ENST00000366736 IL13P35225 146 aa17.01■□□□□ 0.31
MRPL55-210ENST00000366736 PTGER2P43116 358 aa17.01■□□□□ 0.31
MRPL55-210ENST00000366736 SMARCC1Q92922 1105 aaPredicted RBP17.01■□□□□ 0.31
MRPL55-210ENST00000366736 PALLDQ8WX93 1383 aa17.01■□□□□ 0.31
MRPL55-210ENST00000366736 MTHFSP49914 203 aa17■□□□□ 0.31
MRPL55-210ENST00000366736 KCNQ4P56696 695 aa17■□□□□ 0.31
MRPL55-210ENST00000366736 PLEKHO1Q53GL0 409 aaPredicted RBP17■□□□□ 0.31
MRPL55-210ENST00000366736 PIGBQ92521 554 aa17■□□□□ 0.31
MRPL55-210ENST00000366736 PPP1R1BQ9UD71 204 aaPredicted RBP17■□□□□ 0.31
MRPL55-210ENST00000366736 AMOTQ4VCS5 1084 aa16.99■□□□□ 0.31
MRPL55-210ENST00000366736 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
MRPL55-210ENST00000366736 SLC16A10Q8TF71 515 aa16.99■□□□□ 0.31
MRPL55-210ENST00000366736 SGIP1Q9BQI5 828 aa16.99■□□□□ 0.31
MRPL55-210ENST00000366736 SCN11AQ9UI33 1791 aa16.99■□□□□ 0.31
MRPL55-210ENST00000366736 UBR3Q6ZT12 1888 aa16.99■□□□□ 0.31
MRPL55-210ENST00000366736 PNPLA7Q6ZV29 1317 aa16.98■□□□□ 0.31
MRPL55-210ENST00000366736 AEBP1Q8IUX7 1158 aa16.98■□□□□ 0.31
MRPL55-210ENST00000366736 ATF5Q9Y2D1 282 aaPredicted RBP16.98■□□□□ 0.31
MRPL55-210ENST00000366736 ZNF831Q5JPB2 1677 aa16.97■□□□□ 0.31
MRPL55-210ENST00000366736 C4BP0C0L5 1744 aa16.97■□□□□ 0.31
MRPL55-210ENST00000366736 HSP90AB1P08238 724 aaKnown RBP16.97■□□□□ 0.31
MRPL55-210ENST00000366736 SULT6B1Q6IMI4 303 aa16.97■□□□□ 0.31
MRPL55-210ENST00000366736 DCAF5Q96JK2 942 aa16.97■□□□□ 0.31
MRPL55-210ENST00000366736 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
MRPL55-210ENST00000366736 TFCP2L1Q9NZI6 479 aa16.97■□□□□ 0.31
MRPL55-210ENST00000366736 ERVV-2B6SEH9 535 aa16.96■□□□□ 0.31
MRPL55-210ENST00000366736 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
MRPL55-210ENST00000366736 COL3A1P02461 1466 aaPredicted RBP16.95■□□□□ 0.3
MRPL55-210ENST00000366736 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
MRPL55-210ENST00000366736 ASAP1Q9ULH1 1129 aa16.93■□□□□ 0.3
MRPL55-210ENST00000366736 LOC102724428A0A0B4J2F2 783 aa16.92■□□□□ 0.3
MRPL55-210ENST00000366736 DIAPH1O60610 1272 aaKnown RBP16.92■□□□□ 0.3
MRPL55-210ENST00000366736 SIK1P57059 783 aa16.92■□□□□ 0.3
MRPL55-210ENST00000366736 C1orf141Q5JVX7 400 aa16.92■□□□□ 0.3
MRPL55-210ENST00000366736 MAP3K5Q99683 1374 aa16.91■□□□□ 0.3
MRPL55-210ENST00000366736 COL5A3P25940 1745 aaPredicted RBP16.91■□□□□ 0.3
MRPL55-210ENST00000366736 FLAD1Q8NFF5 587 aa16.91■□□□□ 0.3
MRPL55-210ENST00000366736 ATG3Q9NT62 314 aa16.91■□□□□ 0.3
MRPL55-210ENST00000366736 ADAMTS7Q9UKP4 1686 aa16.91■□□□□ 0.3
MRPL55-210ENST00000366736 MYH14Q7Z406 1995 aaKnown RBP16.9■□□□□ 0.3
MRPL55-210ENST00000366736 COL23A1Q86Y22 540 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms