RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 EYA1Q99502 592 aa18.67■□□□□ 0.58
MRPL55-205ENST00000366731 RGPD2P0DJD1 1756 aa18.67■□□□□ 0.58
MRPL55-205ENST00000366731 EIF4A2Q14240 407 aaKnown RBP18.66■□□□□ 0.58
MRPL55-205ENST00000366731 PROM2Q8N271 834 aa18.66■□□□□ 0.58
MRPL55-205ENST00000366731 FAM208AQ9UK61 1670 aaKnown RBP18.65■□□□□ 0.58
MRPL55-205ENST00000366731 PER1O15534 1290 aaPredicted RBP18.65■□□□□ 0.58
MRPL55-205ENST00000366731 PRIM1P49642 420 aaKnown RBP18.65■□□□□ 0.58
MRPL55-205ENST00000366731 TXNRD1Q16881 649 aa18.63■□□□□ 0.57
MRPL55-205ENST00000366731 SBF2Q86WG5 1849 aa18.62■□□□□ 0.57
MRPL55-205ENST00000366731 MAP2P11137 1827 aaKnown RBP18.62■□□□□ 0.57
MRPL55-205ENST00000366731 ANO8Q9HCE9 1232 aaPredicted RBP18.6■□□□□ 0.57
MRPL55-205ENST00000366731 PCDH11XQ9BZA7 1347 aa18.6■□□□□ 0.57
MRPL55-205ENST00000366731 PCDH11YQ9BZA8 1340 aa18.6■□□□□ 0.57
MRPL55-205ENST00000366731 CYP27B1O15528 508 aa18.59■□□□□ 0.57
MRPL55-205ENST00000366731 ANKRD26Q9UPS8 1709 aa18.59■□□□□ 0.57
MRPL55-205ENST00000366731 MTHFSP49914 203 aa18.58■□□□□ 0.57
MRPL55-205ENST00000366731 SPG7Q9UQ90 795 aa18.58■□□□□ 0.57
MRPL55-205ENST00000366731 KCNQ4P56696 695 aa18.57■□□□□ 0.56
MRPL55-205ENST00000366731 KAT6BQ8WYB5 2073 aa18.57■□□□□ 0.56
MRPL55-205ENST00000366731 RREB1Q92766 1687 aa18.56■□□□□ 0.56
MRPL55-205ENST00000366731 NUP188Q5SRE5 1749 aa18.56■□□□□ 0.56
MRPL55-205ENST00000366731 AEBP1Q8IUX7 1158 aa18.56■□□□□ 0.56
MRPL55-205ENST00000366731 STK32BQ9NY57 414 aa18.56■□□□□ 0.56
MRPL55-205ENST00000366731 IGSF1Q8N6C5 1336 aa18.55■□□□□ 0.56
MRPL55-205ENST00000366731 NHSQ6T4R5 1651 aa18.55■□□□□ 0.56
MRPL55-205ENST00000366731 NCAPD2Q15021 1401 aa18.55■□□□□ 0.56
MRPL55-205ENST00000366731 MPRIPQ6WCQ1 1025 aa18.55■□□□□ 0.56
MRPL55-205ENST00000366731 LRRC4BQ9NT99 713 aa18.55■□□□□ 0.56
MRPL55-205ENST00000366731 IL13P35225 146 aa18.54■□□□□ 0.56
MRPL55-205ENST00000366731 SULT6B1Q6IMI4 303 aa18.54■□□□□ 0.56
MRPL55-205ENST00000366731 PDGFDQ9GZP0 370 aaPredicted RBP18.53■□□□□ 0.56
MRPL55-205ENST00000366731 SLC15A2Q16348 729 aa18.52■□□□□ 0.56
MRPL55-205ENST00000366731 SHANK3Q9BYB0 1731 aa18.52■□□□□ 0.55
MRPL55-205ENST00000366731 PHKG2P15735 406 aa18.51■□□□□ 0.55
MRPL55-205ENST00000366731 IFNL2Q8IZJ0 200 aa18.51■□□□□ 0.55
MRPL55-205ENST00000366731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.51■□□□□ 0.55
MRPL55-205ENST00000366731 BTAF1O14981 1849 aa18.51■□□□□ 0.55
MRPL55-205ENST00000366731 PLEKHO1Q53GL0 409 aaPredicted RBP18.5■□□□□ 0.55
MRPL55-205ENST00000366731 NKX1-1Q15270 411 aaPredicted RBP18.49■□□□□ 0.55
MRPL55-205ENST00000366731 DOT1LQ8TEK3 1739 aa18.49■□□□□ 0.55
MRPL55-205ENST00000366731 DIAPH1O60610 1272 aaKnown RBP18.49■□□□□ 0.55
MRPL55-205ENST00000366731 ZBTB7AO95365 584 aa18.49■□□□□ 0.55
MRPL55-205ENST00000366731 HMOX1P09601 288 aa18.49■□□□□ 0.55
MRPL55-205ENST00000366731 ZNF827Q17R98 1081 aa18.49■□□□□ 0.55
MRPL55-205ENST00000366731 SLC27A3Q5K4L6 730 aa18.49■□□□□ 0.55
MRPL55-205ENST00000366731 ZNF530Q6P9A1 599 aaPredicted RBP18.49■□□□□ 0.55
MRPL55-205ENST00000366731 PIGBQ92521 554 aa18.49■□□□□ 0.55
MRPL55-205ENST00000366731 CCNL1Q9UK58 526 aaPredicted RBP18.49■□□□□ 0.55
MRPL55-205ENST00000366731 NPC1L1Q9UHC9 1359 aa18.48■□□□□ 0.55
MRPL55-205ENST00000366731 RGPD3A6NKT7 1758 aaPredicted RBP18.48■□□□□ 0.55
MRPL55-205ENST00000366731 RGPD4Q7Z3J3 1758 aa18.48■□□□□ 0.55
MRPL55-205ENST00000366731 SPON1Q9HCB6 807 aa18.47■□□□□ 0.55
MRPL55-205ENST00000366731 U2SURPO15042 1029 aaKnown RBP18.46■□□□□ 0.55
MRPL55-205ENST00000366731 AMOTQ4VCS5 1084 aa18.46■□□□□ 0.55
MRPL55-205ENST00000366731 TMOD3Q9NYL9 352 aa18.46■□□□□ 0.55
MRPL55-205ENST00000366731 ATF5Q9Y2D1 282 aaPredicted RBP18.46■□□□□ 0.55
MRPL55-205ENST00000366731 SRCAPQ6ZRS2 3230 aa18.45■□□□□ 0.54
MRPL55-205ENST00000366731 PALLDQ8WX93 1383 aa18.44■□□□□ 0.54
MRPL55-205ENST00000366731 C1orf141Q5JVX7 400 aa18.44■□□□□ 0.54
MRPL55-205ENST00000366731 AKT1S1Q96B36 256 aa18.44■□□□□ 0.54
MRPL55-205ENST00000366731 TFCP2L1Q9NZI6 479 aa18.44■□□□□ 0.54
MRPL55-205ENST00000366731 PPP1R1BQ9UD71 204 aaPredicted RBP18.44■□□□□ 0.54
MRPL55-205ENST00000366731 PKD1L3Q7Z443 1732 aa18.44■□□□□ 0.54
MRPL55-205ENST00000366731 ASAP1Q9ULH1 1129 aa18.43■□□□□ 0.54
MRPL55-205ENST00000366731 SMARCC1Q92922 1105 aaPredicted RBP18.42■□□□□ 0.54
MRPL55-205ENST00000366731 LRP5O75197 1615 aa18.41■□□□□ 0.54
MRPL55-205ENST00000366731 HSP90AB1P08238 724 aaKnown RBP18.41■□□□□ 0.54
MRPL55-205ENST00000366731 PPP2R1AP30153 589 aa18.41■□□□□ 0.54
MRPL55-205ENST00000366731 DCAF5Q96JK2 942 aa18.41■□□□□ 0.54
MRPL55-205ENST00000366731 CFAP53Q96M91 514 aa18.4■□□□□ 0.54
MRPL55-205ENST00000366731 KDRP35968 1356 aa18.4■□□□□ 0.54
MRPL55-205ENST00000366731 MSH5O43196 834 aa18.4■□□□□ 0.54
MRPL55-205ENST00000366731 CABP4P57796 275 aa18.4■□□□□ 0.54
MRPL55-205ENST00000366731 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
MRPL55-205ENST00000366731 TOGARAM1Q9Y4F4 1720 aa18.39■□□□□ 0.53
MRPL55-205ENST00000366731 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.53
MRPL55-205ENST00000366731 ATG3Q9NT62 314 aa18.39■□□□□ 0.53
MRPL55-205ENST00000366731 LOC102724428A0A0B4J2F2 783 aa18.38■□□□□ 0.53
MRPL55-205ENST00000366731 SIK1P57059 783 aa18.38■□□□□ 0.53
MRPL55-205ENST00000366731 PNPLA7Q6ZV29 1317 aa18.37■□□□□ 0.53
MRPL55-205ENST00000366731 MTHFSDQ2M296 383 aaKnown RBP18.37■□□□□ 0.53
MRPL55-205ENST00000366731 RBM42Q9BTD8 480 aaKnown RBP18.37■□□□□ 0.53
MRPL55-205ENST00000366731 MTFR1LQ9H019 292 aa18.37■□□□□ 0.53
MRPL55-205ENST00000366731 PLEKHG2Q9H7P9 1386 aa18.37■□□□□ 0.53
MRPL55-205ENST00000366731 PAPPAQ13219 1627 aa18.37■□□□□ 0.53
MRPL55-205ENST00000366731 KDM6AO15550 1401 aaPredicted RBP18.36■□□□□ 0.53
MRPL55-205ENST00000366731 PTGER2P43116 358 aa18.36■□□□□ 0.53
MRPL55-205ENST00000366731 AKAP4Q5JQC9 854 aa18.36■□□□□ 0.53
MRPL55-205ENST00000366731 SMIM5Q71RC9 77 aa18.36■□□□□ 0.53
MRPL55-205ENST00000366731 NFATC2IPQ8NCF5 419 aa18.36■□□□□ 0.53
MRPL55-205ENST00000366731 COL3A1P02461 1466 aaPredicted RBP18.35■□□□□ 0.53
MRPL55-205ENST00000366731 ATP6V1AP38606 617 aa18.35■□□□□ 0.53
MRPL55-205ENST00000366731 LGR6Q9HBX8 967 aa18.35■□□□□ 0.53
MRPL55-205ENST00000366731 COL23A1Q86Y22 540 aaPredicted RBP18.34■□□□□ 0.53
MRPL55-205ENST00000366731 NUDCQ9Y266 331 aa18.34■□□□□ 0.53
MRPL55-205ENST00000366731 CASZ1Q86V15 1759 aa18.34■□□□□ 0.53
MRPL55-205ENST00000366731 ITGB4P16144 1822 aa18.33■□□□□ 0.53
MRPL55-205ENST00000366731 U2AF1L5P0DN76 240 aaPredicted RBP18.33■□□□□ 0.53
MRPL55-205ENST00000366731 U2AF1Q01081 240 aaKnown RBP eCLIP18.33■□□□□ 0.53
MRPL55-205ENST00000366731 ITPK1Q13572 414 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms