RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 MON2Q7Z3U7 1717 aa15.63■□□□□ 0.09
CSNK1E-202ENST00000366216 KCNH5Q8NCM2 988 aa15.62■□□□□ 0.09
CSNK1E-202ENST00000366216 TTC21BQ7Z4L5 1316 aa15.62■□□□□ 0.09
CSNK1E-202ENST00000366216 FAM208AQ9UK61 1670 aaKnown RBP15.61■□□□□ 0.09
CSNK1E-202ENST00000366216 C5P01031 1676 aa15.6■□□□□ 0.09
CSNK1E-202ENST00000366216 KCNQ4P56696 695 aa15.6■□□□□ 0.09
CSNK1E-202ENST00000366216 SLC27A3Q5K4L6 730 aa15.6■□□□□ 0.09
CSNK1E-202ENST00000366216 ADCY9O60503 1353 aa15.6■□□□□ 0.09
CSNK1E-202ENST00000366216 TFCP2L1Q9NZI6 479 aa15.59■□□□□ 0.09
CSNK1E-202ENST00000366216 RGPD2P0DJD1 1756 aa15.58■□□□□ 0.08
CSNK1E-202ENST00000366216 WDR90Q96KV7 1748 aa15.57■□□□□ 0.08
CSNK1E-202ENST00000366216 IL2RBP14784 551 aa15.57■□□□□ 0.08
CSNK1E-202ENST00000366216 ZNF526Q8TF50 670 aaPredicted RBP15.57■□□□□ 0.08
CSNK1E-202ENST00000366216 CARD11Q9BXL7 1154 aa15.57■□□□□ 0.08
CSNK1E-202ENST00000366216 USP47Q96K76 1375 aa15.57■□□□□ 0.08
CSNK1E-202ENST00000366216 ROCK2O75116 1388 aaKnown RBP15.56■□□□□ 0.08
CSNK1E-202ENST00000366216 NLRP2Q9NX02 1062 aa15.55■□□□□ 0.08
CSNK1E-202ENST00000366216 ERBB3P21860 1342 aa15.54■□□□□ 0.08
CSNK1E-202ENST00000366216 TTC21AQ8NDW8 1320 aa15.54■□□□□ 0.08
CSNK1E-202ENST00000366216 NSD2O96028 1365 aa15.52■□□□□ 0.08
CSNK1E-202ENST00000366216 DDX10Q13206 875 aaKnown RBP15.52■□□□□ 0.08
CSNK1E-202ENST00000366216 ZNF692Q9BU19 519 aaPredicted RBP15.52■□□□□ 0.08
CSNK1E-202ENST00000366216 UBR3Q6ZT12 1888 aa15.52■□□□□ 0.07
CSNK1E-202ENST00000366216 WASHC2AQ641Q2 1341 aa15.51■□□□□ 0.07
CSNK1E-202ENST00000366216 MIER1Q8N108 512 aa15.51■□□□□ 0.07
CSNK1E-202ENST00000366216 CD2APQ9Y5K6 639 aa15.51■□□□□ 0.07
CSNK1E-202ENST00000366216 CD163L1Q9NR16 1453 aa15.51■□□□□ 0.07
CSNK1E-202ENST00000366216 APLP1P51693 650 aa15.5■□□□□ 0.07
CSNK1E-202ENST00000366216 NME9Q86XW9 330 aa15.5■□□□□ 0.07
CSNK1E-202ENST00000366216 ITGB4P16144 1822 aa15.5■□□□□ 0.07
CSNK1E-202ENST00000366216 PCNTO95613 3336 aa15.5■□□□□ 0.07
CSNK1E-202ENST00000366216 USP31Q70CQ4 1352 aa15.49■□□□□ 0.07
CSNK1E-202ENST00000366216 KIF3CO14782 793 aa15.49■□□□□ 0.07
CSNK1E-202ENST00000366216 COL23A1Q86Y22 540 aaPredicted RBP15.49■□□□□ 0.07
CSNK1E-202ENST00000366216 CICQ96RK0 1608 aaPredicted RBP15.49■□□□□ 0.07
CSNK1E-202ENST00000366216 ANKRD36BQ8N2N9 1353 aa15.49■□□□□ 0.07
CSNK1E-202ENST00000366216 TOGARAM1Q9Y4F4 1720 aa15.48■□□□□ 0.07
CSNK1E-202ENST00000366216 EVC2Q86UK5 1308 aa15.48■□□□□ 0.07
CSNK1E-202ENST00000366216 KIF13BQ9NQT8 1826 aa15.48■□□□□ 0.07
CSNK1E-202ENST00000366216 MSL1Q68DK7 614 aa15.48■□□□□ 0.07
CSNK1E-202ENST00000366216 DNAJC5GQ8N7S2 189 aa15.48■□□□□ 0.07
CSNK1E-202ENST00000366216 DDX54Q8TDD1 881 aaKnown RBP15.48■□□□□ 0.07
CSNK1E-202ENST00000366216 ANKRD24Q8TF21 1146 aa15.48■□□□□ 0.07
CSNK1E-202ENST00000366216 SYTL4Q96C24 671 aaPredicted RBP15.48■□□□□ 0.07
CSNK1E-202ENST00000366216 N4BP2Q86UW6 1770 aaPredicted RBP15.48■□□□□ 0.07
CSNK1E-202ENST00000366216 KTN1Q86UP2 1357 aaKnown RBP15.48■□□□□ 0.07
CSNK1E-202ENST00000366216 SBNO2Q9Y2G9 1366 aa15.48■□□□□ 0.07
CSNK1E-202ENST00000366216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.47■□□□□ 0.07
CSNK1E-202ENST00000366216 CCNL1Q9UK58 526 aaPredicted RBP15.47■□□□□ 0.07
CSNK1E-202ENST00000366216 PRIM1P49642 420 aaKnown RBP15.46■□□□□ 0.07
CSNK1E-202ENST00000366216 C4BP0C0L5 1744 aa15.46■□□□□ 0.06
CSNK1E-202ENST00000366216 KIF7Q2M1P5 1343 aa15.45■□□□□ 0.06
CSNK1E-202ENST00000366216 ST20-MTHFSA0A0A6YYL1 179 aa15.45■□□□□ 0.06
CSNK1E-202ENST00000366216 ZBTB22O15209 634 aa15.45■□□□□ 0.06
CSNK1E-202ENST00000366216 BRCA1P38398 1863 aaKnown RBP15.45■□□□□ 0.06
CSNK1E-202ENST00000366216 KIAA1551Q9HCM1 1747 aa15.45■□□□□ 0.06
CSNK1E-202ENST00000366216 AMIGO3Q86WK7 504 aa15.43■□□□□ 0.06
CSNK1E-202ENST00000366216 IGSF1Q8N6C5 1336 aa15.43■□□□□ 0.06
CSNK1E-202ENST00000366216 CAPN15O75808 1086 aa15.42■□□□□ 0.06
CSNK1E-202ENST00000366216 FBLN1P23142 703 aa15.42■□□□□ 0.06
CSNK1E-202ENST00000366216 COL13A1Q5TAT6 717 aaPredicted RBP15.42■□□□□ 0.06
CSNK1E-202ENST00000366216 ARFGEF1Q9Y6D6 1849 aa15.42■□□□□ 0.06
CSNK1E-202ENST00000366216 PKD1L3Q7Z443 1732 aa15.42■□□□□ 0.06
CSNK1E-202ENST00000366216 TOMM70O94826 608 aa15.41■□□□□ 0.06
CSNK1E-202ENST00000366216 HOXD11P31277 338 aaPredicted RBP15.41■□□□□ 0.06
CSNK1E-202ENST00000366216 SMIM5Q71RC9 77 aa15.41■□□□□ 0.06
CSNK1E-202ENST00000366216 MEGF6O75095 1541 aa15.41■□□□□ 0.06
CSNK1E-202ENST00000366216 LTV1Q96GA3 475 aaPredicted RBP15.4■□□□□ 0.06
CSNK1E-202ENST00000366216 FOXD4L1Q9NU39 408 aa15.4■□□□□ 0.06
CSNK1E-202ENST00000366216 WWC3Q9ULE0 1092 aa15.4■□□□□ 0.06
CSNK1E-202ENST00000366216 SBF1O95248 1867 aa15.4■□□□□ 0.06
CSNK1E-202ENST00000366216 FLAD1Q8NFF5 587 aa15.39■□□□□ 0.05
CSNK1E-202ENST00000366216 IP6K1Q92551 441 aa15.39■□□□□ 0.05
CSNK1E-202ENST00000366216 TESK2Q96S53 571 aa15.39■□□□□ 0.05
CSNK1E-202ENST00000366216 SLC12A5Q9H2X9 1139 aa15.39■□□□□ 0.05
CSNK1E-202ENST00000366216 MAP2P11137 1827 aaKnown RBP15.38■□□□□ 0.05
CSNK1E-202ENST00000366216 ANP32CO43423 234 aa15.38■□□□□ 0.05
CSNK1E-202ENST00000366216 SLC24A1O60721 1099 aa15.37■□□□□ 0.05
CSNK1E-202ENST00000366216 TNRC6CQ9HCJ0 1690 aaKnown RBP15.37■□□□□ 0.05
CSNK1E-202ENST00000366216 HMGB2P26583 209 aaKnown RBP15.36■□□□□ 0.05
CSNK1E-202ENST00000366216 PRELPP51888 382 aa15.36■□□□□ 0.05
CSNK1E-202ENST00000366216 JMYQ8N9B5 988 aa15.36■□□□□ 0.05
CSNK1E-202ENST00000366216 TNS4Q8IZW8 715 aa15.35■□□□□ 0.05
CSNK1E-202ENST00000366216 ZCRB1Q8TBF4 217 aaKnown RBP15.35■□□□□ 0.05
CSNK1E-202ENST00000366216 KLRG1Q96E93 195 aa15.35■□□□□ 0.05
CSNK1E-202ENST00000366216 TMF1P82094 1093 aa15.34■□□□□ 0.05
CSNK1E-202ENST00000366216 MAP3K19Q56UN5 1328 aa15.34■□□□□ 0.05
CSNK1E-202ENST00000366216 A0A1W2PP64 1363 aa15.34■□□□□ 0.05
CSNK1E-202ENST00000366216 EDC4Q6P2E9 1401 aaKnown RBP15.34■□□□□ 0.05
CSNK1E-202ENST00000366216 CCER2I3L3R5 266 aa15.33■□□□□ 0.04
CSNK1E-202ENST00000366216 NMRK2Q9NPI5 230 aa15.33■□□□□ 0.04
CSNK1E-202ENST00000366216 CCDC88AQ3V6T2 1871 aa15.33■□□□□ 0.04
CSNK1E-202ENST00000366216 HOXC9P31274 260 aa15.32■□□□□ 0.04
CSNK1E-202ENST00000366216 HTRA3P83110 453 aa15.32■□□□□ 0.04
CSNK1E-202ENST00000366216 NBPF6Q5VWK0 638 aa15.32■□□□□ 0.04
CSNK1E-202ENST00000366216 RBM46Q8TBY0 533 aaKnown RBP15.32■□□□□ 0.04
CSNK1E-202ENST00000366216 NBPF4Q96M43 638 aa15.32■□□□□ 0.04
CSNK1E-202ENST00000366216 PALLDQ8WX93 1383 aa15.32■□□□□ 0.04
CSNK1E-202ENST00000366216 NSD3Q9BZ95 1437 aa15.32■□□□□ 0.04
CSNK1E-202ENST00000366216 CDCA8Q53HL2 280 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms