RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 PIBF1Q8WXW3 757 aa12.55□□□□□ -0.4
CACNA1S-201ENST00000362061 WASLO00401 505 aaPredicted RBP12.55□□□□□ -0.4
CACNA1S-201ENST00000362061 CEBPZQ03701 1054 aaKnown RBP12.55□□□□□ -0.4
CACNA1S-201ENST00000362061 NSD3Q9BZ95 1437 aa12.55□□□□□ -0.4
CACNA1S-201ENST00000362061 SSBP05455 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
CACNA1S-201ENST00000362061 NBPF8Q3BBV2 869 aa12.55□□□□□ -0.4
CACNA1S-201ENST00000362061 C8orf37Q96NL8 207 aa12.55□□□□□ -0.4
CACNA1S-201ENST00000362061 JMYQ8N9B5 988 aa12.55□□□□□ -0.4
CACNA1S-201ENST00000362061 CCDC141Q6ZP82 1450 aa12.55□□□□□ -0.4
CACNA1S-201ENST00000362061 MATR3P43243 847 aaKnown RBP eCLIP12.54□□□□□ -0.4
CACNA1S-201ENST00000362061 IL1RAPL2Q9NP60 686 aa12.54□□□□□ -0.4
CACNA1S-201ENST00000362061 TAF7Q15545 349 aaPredicted RBP12.54□□□□□ -0.4
CACNA1S-201ENST00000362061 DUSP27Q5VZP5 1158 aa12.54□□□□□ -0.4
CACNA1S-201ENST00000362061 IFIT5Q13325 482 aaKnown RBP12.54□□□□□ -0.4
CACNA1S-201ENST00000362061 CHRNA2Q15822 529 aa12.54□□□□□ -0.4
CACNA1S-201ENST00000362061 MKNK2Q9HBH9 465 aa12.54□□□□□ -0.4
CACNA1S-201ENST00000362061 NOL7Q9UMY1 257 aaKnown RBP12.54□□□□□ -0.4
CACNA1S-201ENST00000362061 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
CACNA1S-201ENST00000362061 CDK13Q14004 1512 aaKnown RBP12.54□□□□□ -0.4
CACNA1S-201ENST00000362061 ATF7IPQ6VMQ6 1270 aa12.54□□□□□ -0.4
CACNA1S-201ENST00000362061 PDZRN3Q9UPQ7 1066 aa12.54□□□□□ -0.4
CACNA1S-201ENST00000362061 ANKRD1Q15327 319 aa12.53□□□□□ -0.4
CACNA1S-201ENST00000362061 SYNJ1O43426 1573 aa12.53□□□□□ -0.4
CACNA1S-201ENST00000362061 FMNL2Q96PY5 1086 aa12.53□□□□□ -0.4
CACNA1S-201ENST00000362061 GPTP24298 496 aa12.53□□□□□ -0.4
CACNA1S-201ENST00000362061 FILIP1LQ4L180 1135 aa12.53□□□□□ -0.4
CACNA1S-201ENST00000362061 SCLT1Q96NL6 688 aa12.53□□□□□ -0.4
CACNA1S-201ENST00000362061 MCM2P49736 904 aa12.53□□□□□ -0.4
CACNA1S-201ENST00000362061 BRPF1P55201 1214 aaPredicted RBP12.53□□□□□ -0.4
CACNA1S-201ENST00000362061 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.4
CACNA1S-201ENST00000362061 PDE3AQ14432 1141 aa12.52□□□□□ -0.41
CACNA1S-201ENST00000362061 CDKL5O76039 1030 aa12.52□□□□□ -0.41
CACNA1S-201ENST00000362061 MINDY4BA8MYZ0 360 aa12.52□□□□□ -0.41
CACNA1S-201ENST00000362061 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.41
CACNA1S-201ENST00000362061 DCTN1Q14203 1278 aa12.52□□□□□ -0.41
CACNA1S-201ENST00000362061 SLF2Q8IX21 1173 aa12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 IFNL2Q8IZJ0 200 aa12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 THUMPD2Q9BTF0 503 aaKnown RBP12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 TEX13AQ9BXU3 409 aaPredicted RBP12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 TNNT3P45378 269 aaPredicted RBP12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 TTLL5Q6EMB2 1281 aa12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 SLC5A1P13866 664 aa12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 TMPOP42166 694 aaKnown RBP12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 TNIP1Q15025 636 aa12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 ZBTB3Q9H5J0 574 aa12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 TSHZ2Q9NRE2 1034 aa12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 ANKRD18BA2A2Z9 1011 aa12.51□□□□□ -0.41
CACNA1S-201ENST00000362061 PLB1Q6P1J6 1458 aa12.5□□□□□ -0.41
CACNA1S-201ENST00000362061 STIM1Q13586 685 aa12.5□□□□□ -0.41
CACNA1S-201ENST00000362061 IMMTQ16891 758 aaKnown RBP12.5□□□□□ -0.41
CACNA1S-201ENST00000362061 CWC27Q6UX04 472 aaKnown RBP12.5□□□□□ -0.41
CACNA1S-201ENST00000362061 BLOC1S2Q6QNY1 142 aa12.5□□□□□ -0.41
CACNA1S-201ENST00000362061 GRM1Q13255 1194 aa12.5□□□□□ -0.41
CACNA1S-201ENST00000362061 RUFY1Q96T51 708 aa12.5□□□□□ -0.41
CACNA1S-201ENST00000362061 TANGO6Q9C0B7 1094 aa12.5□□□□□ -0.41
CACNA1S-201ENST00000362061 SEC63Q9UGP8 760 aaKnown RBP12.5□□□□□ -0.41
CACNA1S-201ENST00000362061 ST5P78524 1137 aa12.5□□□□□ -0.41
CACNA1S-201ENST00000362061 EMILIN1Q9Y6C2 1016 aa12.5□□□□□ -0.41
CACNA1S-201ENST00000362061 PATL2C9JE40 543 aaKnown RBP12.5□□□□□ -0.41
CACNA1S-201ENST00000362061 TNRQ92752 1358 aa12.49□□□□□ -0.41
CACNA1S-201ENST00000362061 IQGAP2Q13576 1575 aa12.49□□□□□ -0.41
CACNA1S-201ENST00000362061 RABEP1Q15276 862 aa12.49□□□□□ -0.41
CACNA1S-201ENST00000362061 TMEM87AQ8NBN3 555 aa12.49□□□□□ -0.41
CACNA1S-201ENST00000362061 A0A087WZG4 1122 aa12.49□□□□□ -0.41
CACNA1S-201ENST00000362061 CAGE1Q8TC20 777 aa12.49□□□□□ -0.41
CACNA1S-201ENST00000362061 MAP3K12Q12852 859 aa12.49□□□□□ -0.41
CACNA1S-201ENST00000362061 IFT57Q9NWB7 429 aa12.49□□□□□ -0.41
CACNA1S-201ENST00000362061 CDR1P51861 262 aa12.49□□□□□ -0.41
CACNA1S-201ENST00000362061 CCDC96Q2M329 555 aa12.49□□□□□ -0.41
CACNA1S-201ENST00000362061 ANKRD24Q8TF21 1146 aa12.49□□□□□ -0.41
CACNA1S-201ENST00000362061 FIBPO43427 364 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 ZNF444Q8N0Y2 327 aaPredicted RBP12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 ACSBG1Q96GR2 724 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 FEZ1Q99689 392 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 SMC2O95347 1197 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 NUTM1Q86Y26 1132 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 SMARCE1Q969G3 411 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 FAM13BQ9NYF5 915 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 PPP1R42Q7Z4L9 355 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 CDC5LQ99459 802 aaKnown RBP12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 LAMC3Q9Y6N6 1575 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 NBPF14Q5TI25 921 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 ME1P48163 572 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 NBPF5PQ86XG9 351 aaPredicted RBP12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 RPAP2Q8IXW5 612 aaPredicted RBP12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
CACNA1S-201ENST00000362061 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
CACNA1S-201ENST00000362061 MVPQ14764 893 aaKnown RBP12.47□□□□□ -0.41
CACNA1S-201ENST00000362061 NAPBQ9H115 298 aa12.47□□□□□ -0.41
CACNA1S-201ENST00000362061 GRIN2AQ12879 1464 aa12.47□□□□□ -0.41
CACNA1S-201ENST00000362061 MNS1Q8NEH6 495 aa12.47□□□□□ -0.41
CACNA1S-201ENST00000362061 HYPKQ9NX55 129 aa12.47□□□□□ -0.41
CACNA1S-201ENST00000362061 MYO1BO43795 1136 aa12.47□□□□□ -0.41
CACNA1S-201ENST00000362061 TRIM21P19474 475 aaKnown RBP12.47□□□□□ -0.41
CACNA1S-201ENST00000362061 KRT32Q14532 448 aa12.47□□□□□ -0.41
CACNA1S-201ENST00000362061 POLD1P28340 1107 aa12.47□□□□□ -0.41
CACNA1S-201ENST00000362061 HSPA2P54652 639 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms