RNA–Protein interactions for RNA: ENST00000361871.7

MSRB1-201, Transcript of methionine sulfoxide reductase B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MSRB1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-201ENST00000361871 U2SURPO15042 1029 aaKnown RBP28.41■■■□□ 2.14
MSRB1-201ENST00000361871 HMOX1P09601 288 aa28.4■■■□□ 2.14
MSRB1-201ENST00000361871 PKD1L3Q7Z443 1732 aa28.4■■■□□ 2.14
MSRB1-201ENST00000361871 MARCH10Q8NA82 808 aaPredicted RBP28.39■■■□□ 2.14
MSRB1-201ENST00000361871 ZCRB1Q8TBF4 217 aaKnown RBP28.38■■■□□ 2.13
MSRB1-201ENST00000361871 NUDCQ9Y266 331 aa28.38■■■□□ 2.13
MSRB1-201ENST00000361871 CCDC184Q52MB2 194 aa28.35■■■□□ 2.13
MSRB1-201ENST00000361871 U2AF1L5P0DN76 240 aaPredicted RBP28.34■■■□□ 2.13
MSRB1-201ENST00000361871 U2AF1Q01081 240 aaKnown RBP eCLIP28.34■■■□□ 2.13
MSRB1-201ENST00000361871 EP400Q96L91 3159 aa28.33■■■□□ 2.13
MSRB1-201ENST00000361871 DDX54Q8TDD1 881 aaKnown RBP28.33■■■□□ 2.13
MSRB1-201ENST00000361871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.32■■■□□ 2.12
MSRB1-201ENST00000361871 PLEKHG2Q9H7P9 1386 aa28.32■■■□□ 2.12
MSRB1-201ENST00000361871 RSPH6AQ9H0K4 717 aa28.31■■■□□ 2.12
MSRB1-201ENST00000361871 SBF2Q86WG5 1849 aa28.3■■■□□ 2.12
MSRB1-201ENST00000361871 DIEXFQ68CQ4 756 aaKnown RBP28.3■■■□□ 2.12
MSRB1-201ENST00000361871 SPG7Q9UQ90 795 aa28.3■■■□□ 2.12
MSRB1-201ENST00000361871 CYP27B1O15528 508 aa28.29■■■□□ 2.12
MSRB1-201ENST00000361871 PCDH11XQ9BZA7 1347 aa28.28■■■□□ 2.12
MSRB1-201ENST00000361871 PCDH11YQ9BZA8 1340 aa28.28■■■□□ 2.12
MSRB1-201ENST00000361871 FAM196AQ6ZSG2 479 aa28.28■■■□□ 2.12
MSRB1-201ENST00000361871 PLEKHO1Q53GL0 409 aaPredicted RBP28.27■■■□□ 2.12
MSRB1-201ENST00000361871 BCL9O00512 1426 aa28.27■■■□□ 2.12
MSRB1-201ENST00000361871 FCHSD2O94868 740 aa28.26■■■□□ 2.12
MSRB1-201ENST00000361871 PRKAR2BP31323 418 aa28.26■■■□□ 2.11
MSRB1-201ENST00000361871 AMOTQ4VCS5 1084 aa28.26■■■□□ 2.11
MSRB1-201ENST00000361871 UPF1Q92900 1129 aaKnown RBP eCLIP28.24■■■□□ 2.112e-8■■■■□ 19.8
MSRB1-201ENST00000361871 PHKG2P15735 406 aa28.23■■■□□ 2.11
MSRB1-201ENST00000361871 PHACTR3Q96KR7 559 aa28.23■■■□□ 2.11
MSRB1-201ENST00000361871 MTHFSDQ2M296 383 aaKnown RBP28.22■■■□□ 2.11
MSRB1-201ENST00000361871 ZNF530Q6P9A1 599 aaPredicted RBP28.21■■■□□ 2.11
MSRB1-201ENST00000361871 IFNL2Q8IZJ0 200 aa28.21■■■□□ 2.11
MSRB1-201ENST00000361871 MRS2Q9HD23 443 aa28.21■■■□□ 2.11
MSRB1-201ENST00000361871 DOT1LQ8TEK3 1739 aa28.21■■■□□ 2.11
MSRB1-201ENST00000361871 TRIM37O94972 964 aa28.2■■■□□ 2.11
MSRB1-201ENST00000361871 NKX1-1Q15270 411 aaPredicted RBP28.2■■■□□ 2.11
MSRB1-201ENST00000361871 PLEKHF1Q96S99 279 aa28.2■■■□□ 2.11
MSRB1-201ENST00000361871 SOCS7O14512 581 aa28.19■■■□□ 2.1
MSRB1-201ENST00000361871 ADAMTS8Q9UP79 889 aa28.19■■■□□ 2.1
MSRB1-201ENST00000361871 KAT6BQ8WYB5 2073 aa28.19■■■□□ 2.1
MSRB1-201ENST00000361871 TNS1Q9HBL0 1735 aaKnown RBP28.19■■■□□ 2.1
MSRB1-201ENST00000361871 TOGARAM1Q9Y4F4 1720 aa28.19■■■□□ 2.1
MSRB1-201ENST00000361871 WDR43Q15061 677 aaKnown RBP eCLIP28.18■■■□□ 2.1
MSRB1-201ENST00000361871 PTF1AQ7RTS3 328 aa28.18■■■□□ 2.1
MSRB1-201ENST00000361871 ACSBG1Q96GR2 724 aa28.18■■■□□ 2.1
MSRB1-201ENST00000361871 NHSQ6T4R5 1651 aa28.18■■■□□ 2.1
MSRB1-201ENST00000361871 KCNQ2O43526 872 aa28.17■■■□□ 2.1
MSRB1-201ENST00000361871 PNISRQ8TF01 805 aaKnown RBP28.16■■■□□ 2.1
MSRB1-201ENST00000361871 ITGB4P16144 1822 aa28.15■■■□□ 2.1
MSRB1-201ENST00000361871 VIRMAQ69YN4 1812 aaKnown RBP28.15■■■□□ 2.1
MSRB1-201ENST00000361871 AKAP4Q5JQC9 854 aa28.14■■■□□ 2.1
MSRB1-201ENST00000361871 C1orf141Q5JVX7 400 aa28.14■■■□□ 2.1
MSRB1-201ENST00000361871 KDM6AO15550 1401 aaPredicted RBP28.13■■■□□ 2.09
MSRB1-201ENST00000361871 BCL11BQ9C0K0 894 aaPredicted RBP28.13■■■□□ 2.09
MSRB1-201ENST00000361871 PRIM1P49642 420 aaKnown RBP28.12■■■□□ 2.09
MSRB1-201ENST00000361871 CCDC125Q86Z20 511 aa28.12■■■□□ 2.09
MSRB1-201ENST00000361871 MIER1Q8N108 512 aa28.12■■■□□ 2.09
MSRB1-201ENST00000361871 GAS2L2Q8NHY3 880 aa28.12■■■□□ 2.09
MSRB1-201ENST00000361871 PNNQ9H307 717 aaKnown RBP28.12■■■□□ 2.09
MSRB1-201ENST00000361871 SCN11AQ9UI33 1791 aa28.12■■■□□ 2.09
MSRB1-201ENST00000361871 DLG5Q8TDM6 1919 aa28.11■■■□□ 2.09
MSRB1-201ENST00000361871 BTAF1O14981 1849 aa28.1■■■□□ 2.09
MSRB1-201ENST00000361871 MPRIPQ6WCQ1 1025 aa28.1■■■□□ 2.09
MSRB1-201ENST00000361871 CCDC146Q8IYE0 955 aa28.1■■■□□ 2.09
MSRB1-201ENST00000361871 DCAF5Q96JK2 942 aa28.1■■■□□ 2.09
MSRB1-201ENST00000361871 HSP90AB1P08238 724 aaKnown RBP28.09■■■□□ 2.09
MSRB1-201ENST00000361871 ADAMTS7Q9UKP4 1686 aa28.09■■■□□ 2.09
MSRB1-201ENST00000361871 SYTL4Q96C24 671 aaPredicted RBP28.08■■■□□ 2.09
MSRB1-201ENST00000361871 LGR6Q9HBX8 967 aa28.08■■■□□ 2.09
MSRB1-201ENST00000361871 NEFMP07197 916 aa28.07■■■□□ 2.08
MSRB1-201ENST00000361871 RUNDC1Q96C34 613 aa28.07■■■□□ 2.08
MSRB1-201ENST00000361871 MAP3K5Q99683 1374 aa28.07■■■□□ 2.08
MSRB1-201ENST00000361871 MAPK8IP3Q9UPT6 1336 aa28.06■■■□□ 2.08
MSRB1-201ENST00000361871 GNAT3A8MTJ3 354 aa28.06■■■□□ 2.08
MSRB1-201ENST00000361871 CCER2I3L3R5 266 aa28.06■■■□□ 2.08
MSRB1-201ENST00000361871 APBA3O96018 575 aa28.06■■■□□ 2.08
MSRB1-201ENST00000361871 SF3B2Q13435 895 aaKnown RBP28.06■■■□□ 2.08
MSRB1-201ENST00000361871 DEFB132Q7Z7B7 95 aa28.05■■■□□ 2.08
MSRB1-201ENST00000361871 RNMTO43148 476 aaKnown RBP28.04■■■□□ 2.08
MSRB1-201ENST00000361871 NFE2L2Q16236 605 aa28.04■■■□□ 2.08
MSRB1-201ENST00000361871 ERVV-2B6SEH9 535 aa28.03■■■□□ 2.08
MSRB1-201ENST00000361871 IL17REQ8NFR9 667 aa28.03■■■□□ 2.08
MSRB1-201ENST00000361871 PIGBQ92521 554 aa28.02■■■□□ 2.08
MSRB1-201ENST00000361871 TMPOP42166 694 aaKnown RBP28.01■■■□□ 2.07
MSRB1-201ENST00000361871 BAG6P46379 1132 aa28.01■■■□□ 2.07
MSRB1-201ENST00000361871 EN1Q05925 392 aaPredicted RBP28.01■■■□□ 2.07
MSRB1-201ENST00000361871 FAM9BQ8IZU0 186 aa28■■■□□ 2.07
MSRB1-201ENST00000361871 TMOD3Q9NYL9 352 aa28■■■□□ 2.07
MSRB1-201ENST00000361871 MRC1P22897 1456 aa27.99■■■□□ 2.07
MSRB1-201ENST00000361871 PLSCR1O15162 318 aa27.99■■■□□ 2.07
MSRB1-201ENST00000361871 CABP4P57796 275 aa27.99■■■□□ 2.07
MSRB1-201ENST00000361871 RGPD3A6NKT7 1758 aaPredicted RBP27.98■■■□□ 2.07
MSRB1-201ENST00000361871 RGPD4Q7Z3J3 1758 aa27.98■■■□□ 2.07
MSRB1-201ENST00000361871 NFATC2IPQ8NCF5 419 aa27.98■■■□□ 2.07
MSRB1-201ENST00000361871 CAMKK2Q96RR4 588 aa27.98■■■□□ 2.07
MSRB1-201ENST00000361871 RRP7AQ9Y3A4 280 aaKnown RBP27.98■■■□□ 2.07
MSRB1-201ENST00000361871 CEMIPQ8WUJ3 1361 aa27.98■■■□□ 2.07
MSRB1-201ENST00000361871 SIPA1L3O60292 1781 aaPredicted RBP27.97■■■□□ 2.07
MSRB1-201ENST00000361871 HTATSF1O43719 755 aaKnown RBP27.97■■■□□ 2.07
MSRB1-201ENST00000361871 DCTN1Q14203 1278 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms