RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 BCL11BQ9C0K0 894 aaPredicted RBP14.42□□□□□ -0.1
EPHB4-202ENST00000360620 SHROOM2Q13796 1616 aa14.41□□□□□ -0.1
EPHB4-202ENST00000360620 MAP4K4O95819 1239 aaPredicted RBP14.41□□□□□ -0.1
EPHB4-202ENST00000360620 BECN2A8MW95 431 aa14.41□□□□□ -0.1
EPHB4-202ENST00000360620 CD2BP2O95400 341 aaKnown RBP14.41□□□□□ -0.1
EPHB4-202ENST00000360620 ZNF771Q7L3S4 317 aaPredicted RBP14.41□□□□□ -0.1
EPHB4-202ENST00000360620 PHACTR3Q96KR7 559 aa14.41□□□□□ -0.1
EPHB4-202ENST00000360620 CHMP4AQ9BY43 222 aa14.41□□□□□ -0.1
EPHB4-202ENST00000360620 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.41□□□□□ -0.1
EPHB4-202ENST00000360620 HS1BP3Q53T59 392 aa14.41□□□□□ -0.1
EPHB4-202ENST00000360620 DCTPP1Q9H773 170 aa14.41□□□□□ -0.1
EPHB4-202ENST00000360620 RTEL1-TNFRSF6BF6WH68 1400 aa14.4□□□□□ -0.1
EPHB4-202ENST00000360620 H3BQV1 296 aa14.4□□□□□ -0.1
EPHB4-202ENST00000360620 MX1P20591 662 aa14.4□□□□□ -0.1
EPHB4-202ENST00000360620 IFFO2Q5TF58 517 aa14.4□□□□□ -0.1
EPHB4-202ENST00000360620 MEIS3Q99687 375 aa14.4□□□□□ -0.1
EPHB4-202ENST00000360620 A0A1W2PP64 1363 aa14.4□□□□□ -0.1
EPHB4-202ENST00000360620 KDM5AP29375 1690 aaKnown RBP14.4□□□□□ -0.1
EPHB4-202ENST00000360620 CNTROBQ8N137 903 aa14.4□□□□□ -0.1
EPHB4-202ENST00000360620 ANKRD44Q8N8A2 993 aa14.4□□□□□ -0.1
EPHB4-202ENST00000360620 SLC26A8Q96RN1 970 aa14.4□□□□□ -0.1
EPHB4-202ENST00000360620 USP26Q9BXU7 913 aa14.4□□□□□ -0.1
EPHB4-202ENST00000360620 KIF3AQ9Y496 699 aa14.4□□□□□ -0.1
EPHB4-202ENST00000360620 DYNC1I1O14576 645 aa14.39□□□□□ -0.11
EPHB4-202ENST00000360620 IFIT2P09913 472 aaKnown RBP14.39□□□□□ -0.11
EPHB4-202ENST00000360620 CCDC30Q5VVM6 783 aa14.39□□□□□ -0.11
EPHB4-202ENST00000360620 HDAC5Q9UQL6 1122 aa14.39□□□□□ -0.11
EPHB4-202ENST00000360620 ZNF445P59923 1031 aa14.38□□□□□ -0.11
EPHB4-202ENST00000360620 OTUD7AQ8TE49 926 aaPredicted RBP14.38□□□□□ -0.11
EPHB4-202ENST00000360620 TRIM5Q9C035 493 aa14.38□□□□□ -0.11
EPHB4-202ENST00000360620 C9orf78Q9NZ63 289 aaPredicted RBP14.38□□□□□ -0.11
EPHB4-202ENST00000360620 ATP10AO60312 1499 aa14.38□□□□□ -0.11
EPHB4-202ENST00000360620 PUS7Q96PZ0 661 aaKnown RBP14.38□□□□□ -0.11
EPHB4-202ENST00000360620 NOL7Q9UMY1 257 aaKnown RBP14.38□□□□□ -0.11
EPHB4-202ENST00000360620 ERBB4Q15303 1308 aa14.38□□□□□ -0.11
EPHB4-202ENST00000360620 TPM3P06753 285 aa14.38□□□□□ -0.11
EPHB4-202ENST00000360620 NCBP3Q53F19 620 aaKnown RBP14.38□□□□□ -0.11
EPHB4-202ENST00000360620 NUTM2GQ5VZR2 741 aa14.38□□□□□ -0.11
EPHB4-202ENST00000360620 POLKQ9UBT6 870 aa14.37□□□□□ -0.11
EPHB4-202ENST00000360620 CCDC192P0DO97 292 aa14.37□□□□□ -0.11
EPHB4-202ENST00000360620 ZNF830Q96NB3 372 aaPredicted RBP14.37□□□□□ -0.11
EPHB4-202ENST00000360620 SRCIN1Q9C0H9 1055 aa14.37□□□□□ -0.11
EPHB4-202ENST00000360620 PPP1R9BQ96SB3 815 aa14.37□□□□□ -0.11
EPHB4-202ENST00000360620 LMBRD1Q9NUN5 540 aa14.37□□□□□ -0.11
EPHB4-202ENST00000360620 SBNO2Q9Y2G9 1366 aa14.37□□□□□ -0.11
EPHB4-202ENST00000360620 HSP90AB4PQ58FF6 505 aa14.36□□□□□ -0.11
EPHB4-202ENST00000360620 CCDC183Q5T5S1 534 aa14.36□□□□□ -0.11
EPHB4-202ENST00000360620 NCKAP5LQ9HCH0 1330 aa14.36□□□□□ -0.11
EPHB4-202ENST00000360620 CLASRPQ8N2M8 674 aaKnown RBP14.36□□□□□ -0.11
EPHB4-202ENST00000360620 LARP6Q9BRS8 491 aaKnown RBP14.36□□□□□ -0.11
EPHB4-202ENST00000360620 HCLS1P14317 486 aaPredicted RBP14.36□□□□□ -0.11
EPHB4-202ENST00000360620 NUTM1Q86Y26 1132 aa14.36□□□□□ -0.11
EPHB4-202ENST00000360620 PDE1AP54750 535 aa14.35□□□□□ -0.11
EPHB4-202ENST00000360620 PKP1Q13835 747 aa14.35□□□□□ -0.11
EPHB4-202ENST00000360620 ADCY5O95622 1261 aa14.35□□□□□ -0.11
EPHB4-202ENST00000360620 KRT24Q2M2I5 525 aa14.35□□□□□ -0.11
EPHB4-202ENST00000360620 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
EPHB4-202ENST00000360620 CBX1P83916 185 aa14.35□□□□□ -0.11
EPHB4-202ENST00000360620 TEFQ10587 303 aa14.35□□□□□ -0.11
EPHB4-202ENST00000360620 RNF20Q5VTR2 975 aa14.35□□□□□ -0.11
EPHB4-202ENST00000360620 CCDC61Q9Y6R9 512 aa14.35□□□□□ -0.11
EPHB4-202ENST00000360620 CEP85Q6P2H3 762 aa14.34□□□□□ -0.11
EPHB4-202ENST00000360620 ZCCHC11Q5TAX3 1644 aaKnown RBP14.34□□□□□ -0.11
EPHB4-202ENST00000360620 ZNF518AQ6AHZ1 1483 aa14.34□□□□□ -0.11
EPHB4-202ENST00000360620 GSPT1P15170 499 aaKnown RBP14.34□□□□□ -0.11
EPHB4-202ENST00000360620 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
EPHB4-202ENST00000360620 PTPRCP08575 1304 aa14.34□□□□□ -0.11
EPHB4-202ENST00000360620 SF3A1Q15459 793 aaKnown RBP14.33□□□□□ -0.11
EPHB4-202ENST00000360620 HDGFL1Q5TGJ6 251 aa14.33□□□□□ -0.11
EPHB4-202ENST00000360620 PDCL2Q8N4E4 241 aa14.33□□□□□ -0.11
EPHB4-202ENST00000360620 NUDT16Q96DE0 195 aaKnown RBP14.33□□□□□ -0.11
EPHB4-202ENST00000360620 TTC12Q9H892 705 aaPredicted RBP14.33□□□□□ -0.11
EPHB4-202ENST00000360620 CLASP1Q7Z460 1538 aa14.33□□□□□ -0.11
EPHB4-202ENST00000360620 KRT85P78386 507 aa14.33□□□□□ -0.12
EPHB4-202ENST00000360620 CYP46A1Q9Y6A2 500 aa14.33□□□□□ -0.12
EPHB4-202ENST00000360620 SRGAP3O43295 1099 aa14.33□□□□□ -0.12
EPHB4-202ENST00000360620 PDCP20941 246 aa14.33□□□□□ -0.12
EPHB4-202ENST00000360620 TPD52L1Q16890 204 aaPredicted RBP14.33□□□□□ -0.12
EPHB4-202ENST00000360620 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.12
EPHB4-202ENST00000360620 FERMT3Q86UX7 667 aa14.33□□□□□ -0.12
EPHB4-202ENST00000360620 CCDC83Q8IWF9 413 aa14.32□□□□□ -0.12
EPHB4-202ENST00000360620 JAKMIP1Q96N16 626 aaKnown RBP14.32□□□□□ -0.12
EPHB4-202ENST00000360620 ZNF692Q9BU19 519 aaPredicted RBP14.32□□□□□ -0.12
EPHB4-202ENST00000360620 TMEM63CQ9P1W3 806 aa14.32□□□□□ -0.12
EPHB4-202ENST00000360620 CASTP20810 708 aaKnown RBP14.32□□□□□ -0.12
EPHB4-202ENST00000360620 FBXW7Q969H0 707 aa14.32□□□□□ -0.12
EPHB4-202ENST00000360620 PLEKHF1Q96S99 279 aa14.32□□□□□ -0.12
EPHB4-202ENST00000360620 ESYT1Q9BSJ8 1104 aa14.32□□□□□ -0.12
EPHB4-202ENST00000360620 ZHX1Q9UKY1 873 aaPredicted RBP14.32□□□□□ -0.12
EPHB4-202ENST00000360620 CCDC9Q9Y3X0 531 aaKnown RBP14.32□□□□□ -0.12
EPHB4-202ENST00000360620 FOSBP53539 338 aa14.32□□□□□ -0.12
EPHB4-202ENST00000360620 AEBP1Q8IUX7 1158 aa14.32□□□□□ -0.12
EPHB4-202ENST00000360620 CHAMP1Q96JM3 812 aa14.32□□□□□ -0.12
EPHB4-202ENST00000360620 TNMDQ9H2S6 317 aa14.32□□□□□ -0.12
EPHB4-202ENST00000360620 TPM4P67936 248 aa14.31□□□□□ -0.12
EPHB4-202ENST00000360620 USP48Q86UV5 1035 aa14.31□□□□□ -0.12
EPHB4-202ENST00000360620 NOLC1Q14978 699 aaKnown RBP eCLIP14.31□□□□□ -0.121e-5■□□□□ 10.6
EPHB4-202ENST00000360620 G3BP1Q13283 466 aaKnown RBP eCLIP14.31□□□□□ -0.12
EPHB4-202ENST00000360620 DDX54Q8TDD1 881 aaKnown RBP14.31□□□□□ -0.12
EPHB4-202ENST00000360620 NUP62CLQ9H1M0 184 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms