RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 SKAP1Q86WV1 359 aa15.7■□□□□ 0.1
CCDC144A-203ENST00000360495 POTEB2H3BUK9 544 aa15.7■□□□□ 0.1
CCDC144A-203ENST00000360495 ZHX3Q9H4I2 956 aa15.69■□□□□ 0.1
CCDC144A-203ENST00000360495 SEPT11Q9NVA2 429 aaKnown RBP15.69■□□□□ 0.1
CCDC144A-203ENST00000360495 RAI14Q9P0K7 980 aa15.69■□□□□ 0.1
CCDC144A-203ENST00000360495 NOL7Q9UMY1 257 aaKnown RBP15.69■□□□□ 0.1
CCDC144A-203ENST00000360495 TOP2AP11388 1531 aaKnown RBP15.69■□□□□ 0.1
CCDC144A-203ENST00000360495 CCT4P50991 539 aaKnown RBP15.69■□□□□ 0.1
CCDC144A-203ENST00000360495 IRX3P78415 501 aaPredicted RBP15.69■□□□□ 0.1
CCDC144A-203ENST00000360495 CWC27Q6UX04 472 aaKnown RBP15.69■□□□□ 0.1
CCDC144A-203ENST00000360495 WDR63Q8IWG1 891 aa15.69■□□□□ 0.1
CCDC144A-203ENST00000360495 MEX3CQ5U5Q3 659 aaKnown RBP15.69■□□□□ 0.1
CCDC144A-203ENST00000360495 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
CCDC144A-203ENST00000360495 SPA17Q15506 151 aa15.68■□□□□ 0.1
CCDC144A-203ENST00000360495 CASTP20810 708 aaKnown RBP15.68■□□□□ 0.1
CCDC144A-203ENST00000360495 CTR9Q6PD62 1173 aa15.68■□□□□ 0.1
CCDC144A-203ENST00000360495 SCAND2PQ9GZW5 306 aaPredicted RBP15.68■□□□□ 0.1
CCDC144A-203ENST00000360495 CDKL5O76039 1030 aa15.68■□□□□ 0.1
CCDC144A-203ENST00000360495 IFFO1Q0D2I5 559 aa15.68■□□□□ 0.1
CCDC144A-203ENST00000360495 CCDC91Q7Z6B0 441 aa15.68■□□□□ 0.1
CCDC144A-203ENST00000360495 CCDC83Q8IWF9 413 aa15.68■□□□□ 0.1
CCDC144A-203ENST00000360495 ZNF397Q8NF99 534 aaPredicted RBP15.68■□□□□ 0.1
CCDC144A-203ENST00000360495 TMX1Q9H3N1 280 aa15.68■□□□□ 0.1
CCDC144A-203ENST00000360495 PAXBP1Q9Y5B6 917 aa15.68■□□□□ 0.1
CCDC144A-203ENST00000360495 CCDC69A6NI79 296 aa15.67■□□□□ 0.1
CCDC144A-203ENST00000360495 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
CCDC144A-203ENST00000360495 CEP135Q66GS9 1140 aa15.67■□□□□ 0.1
CCDC144A-203ENST00000360495 SNW1Q13573 536 aaKnown RBP15.67■□□□□ 0.1
CCDC144A-203ENST00000360495 SMC1AQ14683 1233 aaKnown RBP15.67■□□□□ 0.1
CCDC144A-203ENST00000360495 CCDC175P0C221 793 aa15.67■□□□□ 0.1
CCDC144A-203ENST00000360495 GSDMDP57764 484 aa15.67■□□□□ 0.1
CCDC144A-203ENST00000360495 LUZP1Q86V48 1076 aa15.67■□□□□ 0.1
CCDC144A-203ENST00000360495 IKQ13123 557 aaPredicted RBP15.66■□□□□ 0.1
CCDC144A-203ENST00000360495 NF2P35240 595 aa15.66■□□□□ 0.1
CCDC144A-203ENST00000360495 KRT32Q14532 448 aa15.66■□□□□ 0.1
CCDC144A-203ENST00000360495 CKAP2LQ8IYA6 745 aa15.66■□□□□ 0.1
CCDC144A-203ENST00000360495 GTPBP4Q9BZE4 634 aaKnown RBP15.66■□□□□ 0.1
CCDC144A-203ENST00000360495 BCCIPQ9P287 314 aaKnown RBP eCLIP15.66■□□□□ 0.1
CCDC144A-203ENST00000360495 SLC3A2P08195 630 aaKnown RBP15.66■□□□□ 0.1
CCDC144A-203ENST00000360495 CABP2Q9NPB3 220 aa15.66■□□□□ 0.1
CCDC144A-203ENST00000360495 TTC39AQ5SRH9 613 aa15.66■□□□□ 0.1
CCDC144A-203ENST00000360495 EVA1CP58658 441 aa15.65■□□□□ 0.1
CCDC144A-203ENST00000360495 ATAD2BQ9ULI0 1458 aa15.65■□□□□ 0.1
CCDC144A-203ENST00000360495 CCDC158Q5M9N0 1113 aa15.65■□□□□ 0.1
CCDC144A-203ENST00000360495 NUP133Q8WUM0 1156 aa15.65■□□□□ 0.1
CCDC144A-203ENST00000360495 STAC3Q96MF2 364 aa15.65■□□□□ 0.1
CCDC144A-203ENST00000360495 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.65■□□□□ 0.1
CCDC144A-203ENST00000360495 FGD6Q6ZV73 1430 aa15.64■□□□□ 0.09
CCDC144A-203ENST00000360495 XRCC6P12956 609 aaKnown RBP eCLIP15.64■□□□□ 0.09
CCDC144A-203ENST00000360495 PAFAH1B1P43034 410 aa15.64■□□□□ 0.09
CCDC144A-203ENST00000360495 UVSSAQ2YD98 709 aa15.64■□□□□ 0.09
CCDC144A-203ENST00000360495 KLHL40Q2TBA0 621 aa15.64■□□□□ 0.09
CCDC144A-203ENST00000360495 IVLP07476 585 aa15.63■□□□□ 0.09
CCDC144A-203ENST00000360495 SIL1Q9H173 461 aa15.63■□□□□ 0.09
CCDC144A-203ENST00000360495 CCDC57Q2TAC2 916 aa15.63■□□□□ 0.09
CCDC144A-203ENST00000360495 GAS2L2Q8NHY3 880 aa15.63■□□□□ 0.09
CCDC144A-203ENST00000360495 RUSC2Q8N2Y8 1516 aa15.63■□□□□ 0.09
CCDC144A-203ENST00000360495 CTAGE5O15320 804 aa15.63■□□□□ 0.09
CCDC144A-203ENST00000360495 RBM27Q9P2N5 1060 aaKnown RBP15.63■□□□□ 0.09
CCDC144A-203ENST00000360495 PLEKHH1Q9ULM0 1364 aa15.63■□□□□ 0.09
CCDC144A-203ENST00000360495 TMC6Q7Z403 805 aa15.63■□□□□ 0.09
CCDC144A-203ENST00000360495 BAG4O95429 457 aaKnown RBP15.63■□□□□ 0.09
CCDC144A-203ENST00000360495 AACSQ86V21 672 aa15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 RAPGEF4Q8WZA2 1011 aa15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 CCDC94Q9BW85 323 aaPredicted RBP15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 RSPH14Q9UHP6 348 aa15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 GCOM1H8Y6P7 765 aaPredicted RBP15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 MYZAPP0CAP1 466 aa15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 NOLC1Q14978 699 aaKnown RBP eCLIP15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 TMEM132AQ24JP5 1023 aa15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 ZSCAN23Q3MJ62 389 aa15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 SYTL4Q96C24 671 aaPredicted RBP15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 IL1RAPL2Q9NP60 686 aa15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 SPECC1Q5M775 1068 aa15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 KLHL10Q6JEL2 608 aa15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 RPAP2Q8IXW5 612 aaPredicted RBP15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 GOPCQ9HD26 462 aa15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 DDX19AQ9NUU7 478 aaKnown RBP15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 MYOM3Q5VTT5 1437 aa15.62■□□□□ 0.09
CCDC144A-203ENST00000360495 C11orf95C9JLR9 678 aaPredicted RBP15.61■□□□□ 0.09
CCDC144A-203ENST00000360495 CCDC178Q5BJE1 867 aa15.61■□□□□ 0.09
CCDC144A-203ENST00000360495 TMEM57Q8N5G2 664 aa15.61■□□□□ 0.09
CCDC144A-203ENST00000360495 GDPD2Q9HCC8 539 aa15.61■□□□□ 0.09
CCDC144A-203ENST00000360495 BMP2KQ9NSY1 1161 aaPredicted RBP15.61■□□□□ 0.09
CCDC144A-203ENST00000360495 SLFN5Q08AF3 891 aa15.61■□□□□ 0.09
CCDC144A-203ENST00000360495 NACAP1Q9BZK3 213 aa15.61■□□□□ 0.09
CCDC144A-203ENST00000360495 GOLGA6L9A6NEM1 432 aa15.61■□□□□ 0.09
CCDC144A-203ENST00000360495 SSBP05455 408 aaKnown RBP eCLIP15.61■□□□□ 0.09
CCDC144A-203ENST00000360495 GIGYF2Q6Y7W6 1299 aaKnown RBP15.61■□□□□ 0.09
CCDC144A-203ENST00000360495 CPLX3Q8WVH0 158 aa15.61■□□□□ 0.09
CCDC144A-203ENST00000360495 PANK2Q9BZ23 570 aa15.61■□□□□ 0.09
CCDC144A-203ENST00000360495 SPECC1LQ69YQ0 1117 aa15.6■□□□□ 0.09
CCDC144A-203ENST00000360495 DNA2P51530 1060 aa15.6■□□□□ 0.09
CCDC144A-203ENST00000360495 C20orf194Q5TEA3 1177 aa15.6■□□□□ 0.09
CCDC144A-203ENST00000360495 HDGFL1Q5TGJ6 251 aa15.6■□□□□ 0.09
CCDC144A-203ENST00000360495 CEP131Q9UPN4 1083 aa15.6■□□□□ 0.09
CCDC144A-203ENST00000360495 SCAPERQ9BY12 1400 aa15.6■□□□□ 0.09
CCDC144A-203ENST00000360495 ZNF830Q96NB3 372 aaPredicted RBP15.6■□□□□ 0.09
CCDC144A-203ENST00000360495 CCDC171Q6TFL3 1326 aa15.6■□□□□ 0.09
CCDC144A-203ENST00000360495 PAF1Q8N7H5 531 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms