RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 TRPM1Q7Z4N2 1603 aa12.02□□□□□ -0.49
SIN3A-201ENST00000360439 GORABQ5T7V8 394 aa12.02□□□□□ -0.49
SIN3A-201ENST00000360439 ABCC1P33527 1531 aa12.01□□□□□ -0.49
SIN3A-201ENST00000360439 PANK1Q8TE04 598 aa12.01□□□□□ -0.49
SIN3A-201ENST00000360439 TSPYL1Q9H0U9 437 aa12.01□□□□□ -0.49
SIN3A-201ENST00000360439 MCCP23508 829 aa12.01□□□□□ -0.49
SIN3A-201ENST00000360439 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
SIN3A-201ENST00000360439 CDC42BPAQ5VT25 1732 aa12.01□□□□□ -0.49
SIN3A-201ENST00000360439 MRE11P49959 708 aa12.01□□□□□ -0.49
SIN3A-201ENST00000360439 TCP11L2Q8N4U5 519 aa12.01□□□□□ -0.49
SIN3A-201ENST00000360439 GTPBP4Q9BZE4 634 aaKnown RBP12.01□□□□□ -0.49
SIN3A-201ENST00000360439 UNC13BO14795 1591 aa12.01□□□□□ -0.49
SIN3A-201ENST00000360439 PLXNC1O60486 1568 aa12.01□□□□□ -0.49
SIN3A-201ENST00000360439 BCAR3O75815 825 aa12□□□□□ -0.49
SIN3A-201ENST00000360439 CSPP1Q1MSJ5 1256 aa12□□□□□ -0.49
SIN3A-201ENST00000360439 C22orf23Q9BZE7 217 aa12□□□□□ -0.49
SIN3A-201ENST00000360439 FAM177BA6PVY3 158 aa12□□□□□ -0.49
SIN3A-201ENST00000360439 EXOC5O00471 708 aa12□□□□□ -0.49
SIN3A-201ENST00000360439 DDX17Q92841 729 aaKnown RBP12□□□□□ -0.49
SIN3A-201ENST00000360439 KIF3AQ9Y496 699 aa12□□□□□ -0.49
SIN3A-201ENST00000360439 KDM2BQ8NHM5 1336 aa12□□□□□ -0.49
SIN3A-201ENST00000360439 GNAI1P63096 354 aa11.99□□□□□ -0.49
SIN3A-201ENST00000360439 POLR3AO14802 1390 aaPredicted RBP11.99□□□□□ -0.49
SIN3A-201ENST00000360439 ZBTB22O15209 634 aa11.99□□□□□ -0.49
SIN3A-201ENST00000360439 TMX1Q9H3N1 280 aa11.99□□□□□ -0.49
SIN3A-201ENST00000360439 IQGAP3Q86VI3 1631 aa11.99□□□□□ -0.49
SIN3A-201ENST00000360439 FBLN1P23142 703 aa11.99□□□□□ -0.49
SIN3A-201ENST00000360439 C20orf194Q5TEA3 1177 aa11.99□□□□□ -0.49
SIN3A-201ENST00000360439 ABCC11Q96J66 1382 aa11.99□□□□□ -0.49
SIN3A-201ENST00000360439 FKBP5Q13451 457 aaPredicted RBP11.99□□□□□ -0.49
SIN3A-201ENST00000360439 PDZRN3Q9UPQ7 1066 aa11.99□□□□□ -0.49
SIN3A-201ENST00000360439 HECW2Q9P2P5 1572 aa11.99□□□□□ -0.49
SIN3A-201ENST00000360439 MVPQ14764 893 aaKnown RBP11.98□□□□□ -0.49
SIN3A-201ENST00000360439 KDM5AP29375 1690 aaKnown RBP11.98□□□□□ -0.49
SIN3A-201ENST00000360439 DDX58O95786 925 aaKnown RBP11.98□□□□□ -0.49
SIN3A-201ENST00000360439 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.98□□□□□ -0.495e-6■■■■■ 45.5
SIN3A-201ENST00000360439 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
SIN3A-201ENST00000360439 SETQ01105 290 aaPredicted RBP11.98□□□□□ -0.49
SIN3A-201ENST00000360439 ZNF335Q9H4Z2 1342 aaPredicted RBP11.98□□□□□ -0.49
SIN3A-201ENST00000360439 ZNF428Q96B54 188 aa11.98□□□□□ -0.49
SIN3A-201ENST00000360439 C9orf78Q9NZ63 289 aaPredicted RBP11.98□□□□□ -0.49
SIN3A-201ENST00000360439 NOM1Q5C9Z4 860 aaKnown RBP11.97□□□□□ -0.49
SIN3A-201ENST00000360439 MPRIPQ6WCQ1 1025 aa11.97□□□□□ -0.49
SIN3A-201ENST00000360439 YTHDC2Q9H6S0 1430 aaKnown RBP11.97□□□□□ -0.49
SIN3A-201ENST00000360439 TTC21BQ7Z4L5 1316 aa11.96□□□□□ -0.49
SIN3A-201ENST00000360439 RIC3Q7Z5B4 369 aa11.96□□□□□ -0.49
SIN3A-201ENST00000360439 CALCOCO1Q9P1Z2 691 aa11.96□□□□□ -0.49
SIN3A-201ENST00000360439 PPIP5K1Q6PFW1 1433 aa11.96□□□□□ -0.49
SIN3A-201ENST00000360439 PTCD1O75127 700 aaKnown RBP11.96□□□□□ -0.5
SIN3A-201ENST00000360439 HMMRO75330 724 aa11.96□□□□□ -0.5
SIN3A-201ENST00000360439 C8orf34Q49A92 452 aa11.96□□□□□ -0.5
SIN3A-201ENST00000360439 CCDC27Q2M243 656 aa11.95□□□□□ -0.5
SIN3A-201ENST00000360439 HSP90AB3PQ58FF7 597 aa11.95□□□□□ -0.5
SIN3A-201ENST00000360439 ANKRD24Q8TF21 1146 aa11.95□□□□□ -0.5
SIN3A-201ENST00000360439 MRVI1Q9Y6F6 885 aa11.95□□□□□ -0.5
SIN3A-201ENST00000360439 PUS7Q96PZ0 661 aaKnown RBP11.95□□□□□ -0.5
SIN3A-201ENST00000360439 API5Q9BZZ5 524 aaKnown RBP11.95□□□□□ -0.5
SIN3A-201ENST00000360439 KCNA4P22459 653 aa11.95□□□□□ -0.5
SIN3A-201ENST00000360439 TMEM94Q12767 1356 aa11.95□□□□□ -0.5
SIN3A-201ENST00000360439 PLEKHH1Q9ULM0 1364 aa11.95□□□□□ -0.5
SIN3A-201ENST00000360439 RARSP54136 660 aaKnown RBP11.95□□□□□ -0.5
SIN3A-201ENST00000360439 RGS22Q8NE09 1264 aa11.95□□□□□ -0.5
SIN3A-201ENST00000360439 CIZ1Q9ULV3 898 aaPredicted RBP11.95□□□□□ -0.5
SIN3A-201ENST00000360439 GCC1Q96CN9 775 aa11.94□□□□□ -0.5
SIN3A-201ENST00000360439 TRPM2O94759 1503 aa11.94□□□□□ -0.5
SIN3A-201ENST00000360439 NPHP4O75161 1426 aaPredicted RBP11.94□□□□□ -0.5
SIN3A-201ENST00000360439 UGGT1Q9NYU2 1555 aa11.94□□□□□ -0.5
SIN3A-201ENST00000360439 SHROOM2Q13796 1616 aa11.94□□□□□ -0.5
SIN3A-201ENST00000360439 ST18O60284 1047 aa11.94□□□□□ -0.5
SIN3A-201ENST00000360439 SYAP1Q96A49 352 aaPredicted RBP11.94□□□□□ -0.5
SIN3A-201ENST00000360439 ANAPC15P60006 121 aa11.94□□□□□ -0.5
SIN3A-201ENST00000360439 FAM43BQ6ZT52 329 aaPredicted RBP11.94□□□□□ -0.5
SIN3A-201ENST00000360439 PAIP2Q9BPZ3 127 aaKnown RBP11.94□□□□□ -0.5
SIN3A-201ENST00000360439 TMOD3Q9NYL9 352 aa11.94□□□□□ -0.5
SIN3A-201ENST00000360439 ZRANB1Q9UGI0 708 aa11.94□□□□□ -0.5
SIN3A-201ENST00000360439 GCP02774 474 aa11.92□□□□□ -0.5
SIN3A-201ENST00000360439 TTC21AQ8NDW8 1320 aa11.92□□□□□ -0.5
SIN3A-201ENST00000360439 PHF14O94880 888 aa11.92□□□□□ -0.5
SIN3A-201ENST00000360439 BTG4Q9NY30 223 aa11.92□□□□□ -0.5
SIN3A-201ENST00000360439 IL16Q14005 1332 aa11.92□□□□□ -0.5
SIN3A-201ENST00000360439 BTBD11A6QL63 1104 aa11.92□□□□□ -0.5
SIN3A-201ENST00000360439 DMTNQ08495 405 aa11.91□□□□□ -0.5
SIN3A-201ENST00000360439 CCDC94Q9BW85 323 aaPredicted RBP11.91□□□□□ -0.5
SIN3A-201ENST00000360439 E9PCH4 1651 aa11.91□□□□□ -0.5
SIN3A-201ENST00000360439 HSP90AB2PQ58FF8 381 aa11.91□□□□□ -0.5
SIN3A-201ENST00000360439 PDCL2Q8N4E4 241 aa11.91□□□□□ -0.5
SIN3A-201ENST00000360439 CWC22Q9HCG8 908 aaKnown RBP11.91□□□□□ -0.5
SIN3A-201ENST00000360439 FCHSD2O94868 740 aa11.91□□□□□ -0.5
SIN3A-201ENST00000360439 ANKRD45Q5TZF3 282 aa11.91□□□□□ -0.5
SIN3A-201ENST00000360439 ATF7IPQ6VMQ6 1270 aa11.91□□□□□ -0.5
SIN3A-201ENST00000360439 KIF6Q6ZMV9 814 aa11.91□□□□□ -0.5
SIN3A-201ENST00000360439 GNAT3A8MTJ3 354 aa11.9□□□□□ -0.5
SIN3A-201ENST00000360439 FYB1O15117 783 aa11.9□□□□□ -0.5
SIN3A-201ENST00000360439 MYL6BP14649 208 aa11.9□□□□□ -0.5
SIN3A-201ENST00000360439 PRDM4Q9UKN5 801 aa11.9□□□□□ -0.5
SIN3A-201ENST00000360439 LOC102724159A0A0B4J2E5 919 aa11.9□□□□□ -0.5
SIN3A-201ENST00000360439 CDC45O75419 566 aa11.9□□□□□ -0.5
SIN3A-201ENST00000360439 NUCB2P80303 420 aa11.9□□□□□ -0.5
SIN3A-201ENST00000360439 PWP2Q15269 919 aaKnown RBP11.9□□□□□ -0.5
SIN3A-201ENST00000360439 ALDH1L2Q3SY69 923 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms