RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 ZNF397Q8NF99 534 aaPredicted RBP17.03■□□□□ 0.32
NUP98-203ENST00000359171 AACSQ86V21 672 aa17.03■□□□□ 0.32
NUP98-203ENST00000359171 PRKCSHP14314 528 aaPredicted RBP17.03■□□□□ 0.32
NUP98-203ENST00000359171 ZNF644Q9H582 1327 aaPredicted RBP17.02■□□□□ 0.32
NUP98-203ENST00000359171 NUP133Q8WUM0 1156 aa17.02■□□□□ 0.32
NUP98-203ENST00000359171 PLEKHH1Q9ULM0 1364 aa17.02■□□□□ 0.32
NUP98-203ENST00000359171 LRRC9Q6ZRR7 1453 aa17.02■□□□□ 0.31
NUP98-203ENST00000359171 SRGAP3O43295 1099 aa17.01■□□□□ 0.31
NUP98-203ENST00000359171 SPA17Q15506 151 aa17.01■□□□□ 0.31
NUP98-203ENST00000359171 URI1O94763 535 aaPredicted RBP17.01■□□□□ 0.31
NUP98-203ENST00000359171 CWC27Q6UX04 472 aaKnown RBP17.01■□□□□ 0.31
NUP98-203ENST00000359171 MICALCLQ6ZW33 695 aa17.01■□□□□ 0.31
NUP98-203ENST00000359171 UBAC1Q9BSL1 405 aa17.01■□□□□ 0.31
NUP98-203ENST00000359171 POTEB2H3BUK9 544 aa17.01■□□□□ 0.31
NUP98-203ENST00000359171 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
NUP98-203ENST00000359171 GPRASP1Q5JY77 1395 aa17■□□□□ 0.31
NUP98-203ENST00000359171 KIF4BQ2VIQ3 1234 aa17■□□□□ 0.31
NUP98-203ENST00000359171 CTAGE5O15320 804 aa17■□□□□ 0.31
NUP98-203ENST00000359171 SIL1Q9H173 461 aa17■□□□□ 0.31
NUP98-203ENST00000359171 CCDC83Q8IWF9 413 aa17■□□□□ 0.31
NUP98-203ENST00000359171 MAP4K4O95819 1239 aaPredicted RBP16.99■□□□□ 0.31
NUP98-203ENST00000359171 CETN2P41208 172 aa16.99■□□□□ 0.31
NUP98-203ENST00000359171 XPCQ01831 940 aaPredicted RBP16.99■□□□□ 0.31
NUP98-203ENST00000359171 SEPT11Q9NVA2 429 aaKnown RBP16.99■□□□□ 0.31
NUP98-203ENST00000359171 MAP2K1Q02750 393 aaPredicted RBP16.99■□□□□ 0.31
NUP98-203ENST00000359171 SULT6B1Q6IMI4 303 aa16.99■□□□□ 0.31
NUP98-203ENST00000359171 CCDC91Q7Z6B0 441 aa16.99■□□□□ 0.31
NUP98-203ENST00000359171 CASTP20810 708 aaKnown RBP16.99■□□□□ 0.31
NUP98-203ENST00000359171 SLFN5Q08AF3 891 aa16.99■□□□□ 0.31
NUP98-203ENST00000359171 TOP1P11387 765 aaKnown RBP16.98■□□□□ 0.31
NUP98-203ENST00000359171 CASQ1P31415 396 aa16.98■□□□□ 0.31
NUP98-203ENST00000359171 CLIP2Q9UDT6 1046 aa16.98■□□□□ 0.31
NUP98-203ENST00000359171 TNNT1P13805 278 aa16.98■□□□□ 0.31
NUP98-203ENST00000359171 CAMK4Q16566 473 aa16.98■□□□□ 0.31
NUP98-203ENST00000359171 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.98■□□□□ 0.31
NUP98-203ENST00000359171 NUTM2GQ5VZR2 741 aa16.98■□□□□ 0.31
NUP98-203ENST00000359171 DESP17661 470 aa16.98■□□□□ 0.31
NUP98-203ENST00000359171 GSDMDP57764 484 aa16.98■□□□□ 0.31
NUP98-203ENST00000359171 FERMT3Q86UX7 667 aa16.98■□□□□ 0.31
NUP98-203ENST00000359171 SSBP05455 408 aaKnown RBP eCLIP16.98■□□□□ 0.31
NUP98-203ENST00000359171 CEP126Q9P2H0 1117 aa16.97■□□□□ 0.31
NUP98-203ENST00000359171 ANKRD30BQ9BXX2 1392 aa16.97■□□□□ 0.31
NUP98-203ENST00000359171 DDX11Q96FC9 970 aa16.97■□□□□ 0.31
NUP98-203ENST00000359171 ATF3P18847 181 aa16.97■□□□□ 0.31
NUP98-203ENST00000359171 SMC1AQ14683 1233 aaKnown RBP16.97■□□□□ 0.31
NUP98-203ENST00000359171 STK11IPQ8N1F8 1099 aa16.97■□□□□ 0.31
NUP98-203ENST00000359171 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
NUP98-203ENST00000359171 PRDM10Q9NQV6 1147 aa16.97■□□□□ 0.31
NUP98-203ENST00000359171 IL1RAPL2Q9NP60 686 aa16.96■□□□□ 0.31
NUP98-203ENST00000359171 DDX19AQ9NUU7 478 aaKnown RBP16.96■□□□□ 0.31
NUP98-203ENST00000359171 IGF1RP08069 1367 aa16.96■□□□□ 0.31
NUP98-203ENST00000359171 NCOA2Q15596 1464 aa16.96■□□□□ 0.31
NUP98-203ENST00000359171 FKBP15Q5T1M5 1219 aa16.96■□□□□ 0.31
NUP98-203ENST00000359171 ABTB2Q8N961 1025 aa16.96■□□□□ 0.31
NUP98-203ENST00000359171 GLRX3O76003 335 aaKnown RBP16.96■□□□□ 0.31
NUP98-203ENST00000359171 FCHSD2O94868 740 aa16.96■□□□□ 0.31
NUP98-203ENST00000359171 TATP17735 454 aaPredicted RBP16.96■□□□□ 0.31
NUP98-203ENST00000359171 NBPF1Q3BBV0 1214 aa16.96■□□□□ 0.31
NUP98-203ENST00000359171 SLC12A5Q9H2X9 1139 aa16.96■□□□□ 0.3
NUP98-203ENST00000359171 PPP1R12BO60237 982 aaPredicted RBP16.95■□□□□ 0.3
NUP98-203ENST00000359171 MX1P20591 662 aa16.95■□□□□ 0.3
NUP98-203ENST00000359171 PAFAH1B1P43034 410 aa16.95■□□□□ 0.3
NUP98-203ENST00000359171 SMARCC1Q92922 1105 aaPredicted RBP16.95■□□□□ 0.3
NUP98-203ENST00000359171 LUZP1Q86V48 1076 aa16.95■□□□□ 0.3
NUP98-203ENST00000359171 PRIMPOLQ96LW4 560 aa16.95■□□□□ 0.3
NUP98-203ENST00000359171 GOLGA6L9A6NEM1 432 aa16.95■□□□□ 0.3
NUP98-203ENST00000359171 DYNC1I1O14576 645 aa16.95■□□□□ 0.3
NUP98-203ENST00000359171 TDO2P48775 406 aa16.95■□□□□ 0.3
NUP98-203ENST00000359171 TMEM57Q8N5G2 664 aa16.95■□□□□ 0.3
NUP98-203ENST00000359171 USP25Q9UHP3 1055 aa16.95■□□□□ 0.3
NUP98-203ENST00000359171 FAM177BA6PVY3 158 aa16.94■□□□□ 0.3
NUP98-203ENST00000359171 FKBP4Q02790 459 aaKnown RBP eCLIP16.94■□□□□ 0.3
NUP98-203ENST00000359171 VPS36Q86VN1 386 aa16.94■□□□□ 0.3
NUP98-203ENST00000359171 KIF1BPQ96EK5 621 aa16.94■□□□□ 0.3
NUP98-203ENST00000359171 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
NUP98-203ENST00000359171 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
NUP98-203ENST00000359171 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
NUP98-203ENST00000359171 TNPO1Q92973 898 aaKnown RBP16.94■□□□□ 0.3
NUP98-203ENST00000359171 PHAXQ9H814 394 aaKnown RBP16.94■□□□□ 0.3
NUP98-203ENST00000359171 DHX37Q8IY37 1157 aaKnown RBP16.94■□□□□ 0.3
NUP98-203ENST00000359171 KIF21BO75037 1637 aa16.93■□□□□ 0.3
NUP98-203ENST00000359171 USO1O60763 962 aaKnown RBP16.93■□□□□ 0.3
NUP98-203ENST00000359171 RAB11FIP3O75154 756 aa16.93■□□□□ 0.3
NUP98-203ENST00000359171 CAVIN2O95810 425 aa16.93■□□□□ 0.3
NUP98-203ENST00000359171 UVSSAQ2YD98 709 aa16.93■□□□□ 0.3
NUP98-203ENST00000359171 NBPF8Q3BBV2 869 aa16.93■□□□□ 0.3
NUP98-203ENST00000359171 ZNF530Q6P9A1 599 aaPredicted RBP16.93■□□□□ 0.3
NUP98-203ENST00000359171 RBM42Q9BTD8 480 aaKnown RBP16.93■□□□□ 0.3
NUP98-203ENST00000359171 BMS1Q14692 1282 aaKnown RBP16.93■□□□□ 0.3
NUP98-203ENST00000359171 ATP2B2Q01814 1243 aa16.93■□□□□ 0.3
NUP98-203ENST00000359171 GOLGA6L10A0A0M3HER8 536 aa16.92■□□□□ 0.3
NUP98-203ENST00000359171 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
NUP98-203ENST00000359171 KIAA1107Q9UPP5 1409 aa16.92■□□□□ 0.3
NUP98-203ENST00000359171 WIZO95785 1651 aa16.92■□□□□ 0.3
NUP98-203ENST00000359171 IFFO1Q0D2I5 559 aa16.92■□□□□ 0.3
NUP98-203ENST00000359171 SSFA2P28290 1259 aa16.92■□□□□ 0.3
NUP98-203ENST00000359171 MPHOSPH8Q99549 860 aa16.92■□□□□ 0.3
NUP98-203ENST00000359171 TBC1D2Q9BYX2 928 aa16.92■□□□□ 0.3
NUP98-203ENST00000359171 GCOM1H8Y6P7 765 aaPredicted RBP16.92■□□□□ 0.3
NUP98-203ENST00000359171 MYZAPP0CAP1 466 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms