RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
TRAPPC4-201ENST00000359005 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
TRAPPC4-201ENST00000359005 PPM1GO15355 546 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC4-201ENST00000359005 DDB1Q16531 1140 aa14.04□□□□□ -0.16
TRAPPC4-201ENST00000359005 WDR63Q8IWG1 891 aa14.04□□□□□ -0.16
TRAPPC4-201ENST00000359005 SALL2Q9Y467 1007 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC4-201ENST00000359005 ERBB3P21860 1342 aa14.04□□□□□ -0.16
TRAPPC4-201ENST00000359005 DISP2A7MBM2 1401 aa14.04□□□□□ -0.16
TRAPPC4-201ENST00000359005 MAP2P11137 1827 aaKnown RBP14.04□□□□□ -0.16
TRAPPC4-201ENST00000359005 CALD1Q05682 793 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-201ENST00000359005 R3HDM1Q15032 1099 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-201ENST00000359005 CCDC146Q8IYE0 955 aa14.03□□□□□ -0.16
TRAPPC4-201ENST00000359005 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC4-201ENST00000359005 ANKRD24Q8TF21 1146 aa14.03□□□□□ -0.16
TRAPPC4-201ENST00000359005 IP6K1Q92551 441 aa14.03□□□□□ -0.16
TRAPPC4-201ENST00000359005 NLRP2Q9NX02 1062 aa14.03□□□□□ -0.16
TRAPPC4-201ENST00000359005 MAP3K19Q56UN5 1328 aa14.03□□□□□ -0.16
TRAPPC4-201ENST00000359005 COL3A1P02461 1466 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC4-201ENST00000359005 RRS1Q15050 365 aaKnown RBP14.02□□□□□ -0.17
TRAPPC4-201ENST00000359005 LTV1Q96GA3 475 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC4-201ENST00000359005 RCAN3Q9UKA8 241 aa14.02□□□□□ -0.17
TRAPPC4-201ENST00000359005 USP54Q70EL1 1684 aa14.01□□□□□ -0.17
TRAPPC4-201ENST00000359005 KCNQ2O43526 872 aa14.01□□□□□ -0.17
TRAPPC4-201ENST00000359005 PROM2Q8N271 834 aa14.01□□□□□ -0.17
TRAPPC4-201ENST00000359005 ZNF521Q96K83 1311 aa14□□□□□ -0.17
TRAPPC4-201ENST00000359005 LMOD3Q0VAK6 560 aa14□□□□□ -0.17
TRAPPC4-201ENST00000359005 MYH16Q9H6N6 1097 aa14□□□□□ -0.17
TRAPPC4-201ENST00000359005 EXOC5O00471 708 aa13.99□□□□□ -0.17
TRAPPC4-201ENST00000359005 HOXC9P31274 260 aa13.99□□□□□ -0.17
TRAPPC4-201ENST00000359005 CDCA7Q9BWT1 371 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC4-201ENST00000359005 FLT4P35916 1363 aa13.98□□□□□ -0.17
TRAPPC4-201ENST00000359005 AMPHP49418 695 aa13.98□□□□□ -0.17
TRAPPC4-201ENST00000359005 SLFN5Q08AF3 891 aa13.98□□□□□ -0.17
TRAPPC4-201ENST00000359005 WWC1Q8IX03 1113 aa13.98□□□□□ -0.17
TRAPPC4-201ENST00000359005 BCL11BQ9C0K0 894 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-201ENST00000359005 RTL1A6NKG5 1358 aa13.97□□□□□ -0.17
TRAPPC4-201ENST00000359005 IL16Q14005 1332 aa13.97□□□□□ -0.17
TRAPPC4-201ENST00000359005 RNF123Q5XPI4 1314 aa13.97□□□□□ -0.17
TRAPPC4-201ENST00000359005 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
TRAPPC4-201ENST00000359005 CT47B1P0C2W7 299 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-201ENST00000359005 IL2RBP14784 551 aa13.96□□□□□ -0.17
TRAPPC4-201ENST00000359005 IL13P35225 146 aa13.96□□□□□ -0.17
TRAPPC4-201ENST00000359005 HSP90AB2PQ58FF8 381 aa13.96□□□□□ -0.17
TRAPPC4-201ENST00000359005 ACSBG1Q96GR2 724 aa13.96□□□□□ -0.17
TRAPPC4-201ENST00000359005 OVOS2A0A0G2JMS6 1433 aa13.96□□□□□ -0.18
TRAPPC4-201ENST00000359005 NBPF6Q5VWK0 638 aa13.95□□□□□ -0.18
TRAPPC4-201ENST00000359005 NBPF4Q96M43 638 aa13.95□□□□□ -0.18
TRAPPC4-201ENST00000359005 ANO8Q9HCE9 1232 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-201ENST00000359005 PPP4R2Q9NY27 417 aa13.95□□□□□ -0.18
TRAPPC4-201ENST00000359005 BCL9O00512 1426 aa13.94□□□□□ -0.18
TRAPPC4-201ENST00000359005 PLSCR1O15162 318 aa13.94□□□□□ -0.18
TRAPPC4-201ENST00000359005 TMPOP42166 694 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-201ENST00000359005 NEUROD2Q15784 382 aa13.94□□□□□ -0.18
TRAPPC4-201ENST00000359005 DUSP27Q5VZP5 1158 aa13.94□□□□□ -0.18
TRAPPC4-201ENST00000359005 TRMT2AQ8IZ69 625 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-201ENST00000359005 USHBP1Q8N6Y0 703 aa13.94□□□□□ -0.18
TRAPPC4-201ENST00000359005 PLEKHF1Q96S99 279 aa13.94□□□□□ -0.18
TRAPPC4-201ENST00000359005 PDGFDQ9GZP0 370 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC4-201ENST00000359005 PEAK1Q9H792 1746 aa13.93□□□□□ -0.18
TRAPPC4-201ENST00000359005 TNS1Q9HBL0 1735 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-201ENST00000359005 RRP1P56182 461 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-201ENST00000359005 RIPK4P57078 832 aa13.93□□□□□ -0.18
TRAPPC4-201ENST00000359005 DDX54Q8TDD1 881 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-201ENST00000359005 CDCA7LQ96GN5 454 aa13.93□□□□□ -0.18
TRAPPC4-201ENST00000359005 RSPH6AQ9H0K4 717 aa13.93□□□□□ -0.18
TRAPPC4-201ENST00000359005 RGPD5Q99666 1765 aa13.93□□□□□ -0.18
TRAPPC4-201ENST00000359005 LRRC37A3O60309 1634 aa13.93□□□□□ -0.18
TRAPPC4-201ENST00000359005 PARP4Q9UKK3 1724 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-201ENST00000359005 PRKAR2BP31323 418 aa13.92□□□□□ -0.18
TRAPPC4-201ENST00000359005 NFE2L2Q16236 605 aa13.92□□□□□ -0.18
TRAPPC4-201ENST00000359005 ABCC6O95255 1503 aa13.91□□□□□ -0.18
TRAPPC4-201ENST00000359005 SENP3-EIF4A1A0A087X0R7 540 aa13.91□□□□□ -0.18
TRAPPC4-201ENST00000359005 TNS2Q63HR2 1409 aa13.9□□□□□ -0.18
TRAPPC4-201ENST00000359005 EIF4A2Q14240 407 aaKnown RBP13.9□□□□□ -0.18
TRAPPC4-201ENST00000359005 TXNRD1Q16881 649 aa13.9□□□□□ -0.18
TRAPPC4-201ENST00000359005 RGPD1P0DJD0 1748 aa13.9□□□□□ -0.18
TRAPPC4-201ENST00000359005 MS4A1P11836 297 aa13.89□□□□□ -0.19
TRAPPC4-201ENST00000359005 RRP7AQ9Y3A4 280 aaKnown RBP13.89□□□□□ -0.19
TRAPPC4-201ENST00000359005 ZNF428Q96B54 188 aa13.88□□□□□ -0.19
TRAPPC4-201ENST00000359005 MEGF6O75095 1541 aa13.88□□□□□ -0.19
TRAPPC4-201ENST00000359005 HMOX1P09601 288 aa13.87□□□□□ -0.19
TRAPPC4-201ENST00000359005 PRIM1P49642 420 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-201ENST00000359005 GNAI1P63096 354 aa13.87□□□□□ -0.19
TRAPPC4-201ENST00000359005 NBPF14Q5TI25 921 aa13.87□□□□□ -0.19
TRAPPC4-201ENST00000359005 SULT6B1Q6IMI4 303 aa13.87□□□□□ -0.19
TRAPPC4-201ENST00000359005 ZCRB1Q8TBF4 217 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-201ENST00000359005 LRRC4BQ9NT99 713 aa13.87□□□□□ -0.19
TRAPPC4-201ENST00000359005 CANXP27824 592 aaKnown RBP13.86□□□□□ -0.19
TRAPPC4-201ENST00000359005 KCNQ4P56696 695 aa13.86□□□□□ -0.19
TRAPPC4-201ENST00000359005 GAS2L2Q8NHY3 880 aa13.86□□□□□ -0.19
TRAPPC4-201ENST00000359005 AAMPQ13685 434 aa13.85□□□□□ -0.19
TRAPPC4-201ENST00000359005 KDRP35968 1356 aa13.84□□□□□ -0.19
TRAPPC4-201ENST00000359005 LTN1O94822 1766 aa13.84□□□□□ -0.19
TRAPPC4-201ENST00000359005 HTATSF1O43719 755 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-201ENST00000359005 IRX6P78412 446 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-201ENST00000359005 RTF1Q92541 710 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-201ENST00000359005 EYA1Q99502 592 aa13.84□□□□□ -0.19
TRAPPC4-201ENST00000359005 IFT57Q9NWB7 429 aa13.84□□□□□ -0.19
TRAPPC4-201ENST00000359005 TRIM35Q9UPQ4 493 aa13.84□□□□□ -0.19
TRAPPC4-201ENST00000359005 IGSF1Q8N6C5 1336 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 223.4 ms