RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 NEK4P51957 841 aa13.62□□□□□ -0.23
SEPSECS-201ENST00000358971 DEF6Q9H4E7 631 aa13.62□□□□□ -0.23
SEPSECS-201ENST00000358971 CDK13Q14004 1512 aaKnown RBP13.62□□□□□ -0.23
SEPSECS-201ENST00000358971 TRPM1Q7Z4N2 1603 aa13.61□□□□□ -0.23
SEPSECS-201ENST00000358971 GCC1Q96CN9 775 aa13.61□□□□□ -0.23
SEPSECS-201ENST00000358971 LAMC3Q9Y6N6 1575 aa13.61□□□□□ -0.23
SEPSECS-201ENST00000358971 EXOSC9Q06265 439 aaKnown RBP13.61□□□□□ -0.23
SEPSECS-201ENST00000358971 CARD10Q9BWT7 1032 aa13.61□□□□□ -0.23
SEPSECS-201ENST00000358971 C1orf115Q9H7X2 142 aa13.61□□□□□ -0.23
SEPSECS-201ENST00000358971 A0A1B0GUL7 405 aa13.61□□□□□ -0.23
SEPSECS-201ENST00000358971 SLFNL1Q499Z3 407 aa13.61□□□□□ -0.23
SEPSECS-201ENST00000358971 NRBP1Q9UHY1 535 aa13.61□□□□□ -0.23
SEPSECS-201ENST00000358971 ST5P78524 1137 aa13.6□□□□□ -0.23
SEPSECS-201ENST00000358971 TTC31Q49AM3 519 aaPredicted RBP13.6□□□□□ -0.23
SEPSECS-201ENST00000358971 NOM1Q5C9Z4 860 aaKnown RBP13.6□□□□□ -0.23
SEPSECS-201ENST00000358971 INTS3Q68E01 1043 aaKnown RBP13.6□□□□□ -0.23
SEPSECS-201ENST00000358971 CFDP1Q9UEE9 299 aaPredicted RBP13.6□□□□□ -0.23
SEPSECS-201ENST00000358971 CFAP44Q96MT7 982 aa13.6□□□□□ -0.23
SEPSECS-201ENST00000358971 RRP15Q9Y3B9 282 aaKnown RBP13.6□□□□□ -0.23
SEPSECS-201ENST00000358971 CFAP74Q9C0B2 1584 aa13.6□□□□□ -0.23
SEPSECS-201ENST00000358971 GSPT1P15170 499 aaKnown RBP13.59□□□□□ -0.23
SEPSECS-201ENST00000358971 PTPN14Q15678 1187 aa13.59□□□□□ -0.23
SEPSECS-201ENST00000358971 SMARCE1Q969G3 411 aa13.59□□□□□ -0.23
SEPSECS-201ENST00000358971 FHOD1Q9Y613 1164 aa13.59□□□□□ -0.23
SEPSECS-201ENST00000358971 SLU7O95391 586 aaKnown RBP13.59□□□□□ -0.23
SEPSECS-201ENST00000358971 PNMA6AP0CW24 399 aaPredicted RBP13.59□□□□□ -0.23
SEPSECS-201ENST00000358971 E2F4Q16254 413 aa13.59□□□□□ -0.23
SEPSECS-201ENST00000358971 ZSCAN25Q6NSZ9 544 aa13.59□□□□□ -0.23
SEPSECS-201ENST00000358971 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.59□□□□□ -0.23
SEPSECS-201ENST00000358971 CASC1Q6TDU7 716 aa13.59□□□□□ -0.23
SEPSECS-201ENST00000358971 SRLQ86TD4 932 aa13.59□□□□□ -0.23
SEPSECS-201ENST00000358971 CEP170Q5SW79 1584 aa13.58□□□□□ -0.23
SEPSECS-201ENST00000358971 IPO8O15397 1037 aaKnown RBP13.58□□□□□ -0.24
SEPSECS-201ENST00000358971 PLA2G4AP47712 749 aa13.58□□□□□ -0.24
SEPSECS-201ENST00000358971 TRIM5Q9C035 493 aa13.58□□□□□ -0.24
SEPSECS-201ENST00000358971 KDM5DQ9BY66 1539 aa13.58□□□□□ -0.24
SEPSECS-201ENST00000358971 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.24
SEPSECS-201ENST00000358971 ERCC6LQ2NKX8 1250 aa13.58□□□□□ -0.24
SEPSECS-201ENST00000358971 CNPY2Q9Y2B0 182 aa13.58□□□□□ -0.24
SEPSECS-201ENST00000358971 RNF20Q5VTR2 975 aa13.57□□□□□ -0.24
SEPSECS-201ENST00000358971 PTPRCP08575 1304 aa13.57□□□□□ -0.24
SEPSECS-201ENST00000358971 CLCN6P51797 869 aa13.57□□□□□ -0.24
SEPSECS-201ENST00000358971 NESP48681 1621 aa13.57□□□□□ -0.24
SEPSECS-201ENST00000358971 SPAG9O60271 1321 aaKnown RBP13.56□□□□□ -0.24
SEPSECS-201ENST00000358971 CCDC192P0DO97 292 aa13.56□□□□□ -0.24
SEPSECS-201ENST00000358971 ZCCHC17Q9NP64 241 aaKnown RBP13.56□□□□□ -0.24
SEPSECS-201ENST00000358971 EXOC6BQ9Y2D4 811 aa13.56□□□□□ -0.24
SEPSECS-201ENST00000358971 FIBPO43427 364 aa13.56□□□□□ -0.24
SEPSECS-201ENST00000358971 PRDM15P57071 1507 aaPredicted RBP13.56□□□□□ -0.24
SEPSECS-201ENST00000358971 WDR33Q9C0J8 1336 aaKnown RBP13.56□□□□□ -0.24
SEPSECS-201ENST00000358971 ATP2B1P20020 1258 aa13.56□□□□□ -0.24
SEPSECS-201ENST00000358971 UBE2HP62256 183 aa13.56□□□□□ -0.24
SEPSECS-201ENST00000358971 ATG3Q9NT62 314 aa13.56□□□□□ -0.24
SEPSECS-201ENST00000358971 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
SEPSECS-201ENST00000358971 TMCO3Q6UWJ1 677 aa13.55□□□□□ -0.24
SEPSECS-201ENST00000358971 PACS2Q86VP3 889 aa13.55□□□□□ -0.24
SEPSECS-201ENST00000358971 CACTINQ8WUQ7 758 aaKnown RBP13.55□□□□□ -0.24
SEPSECS-201ENST00000358971 PHF23Q9BUL5 403 aaPredicted RBP13.55□□□□□ -0.24
SEPSECS-201ENST00000358971 CXorf56Q9H5V9 222 aa13.55□□□□□ -0.24
SEPSECS-201ENST00000358971 TRMT1Q9NXH9 659 aaKnown RBP13.55□□□□□ -0.24
SEPSECS-201ENST00000358971 CT47B1P0C2W7 299 aaPredicted RBP13.55□□□□□ -0.24
SEPSECS-201ENST00000358971 CCDC91Q7Z6B0 441 aa13.55□□□□□ -0.24
SEPSECS-201ENST00000358971 LUZP1Q86V48 1076 aa13.55□□□□□ -0.24
SEPSECS-201ENST00000358971 USP27XA6NNY8 438 aa13.54□□□□□ -0.24
SEPSECS-201ENST00000358971 H2AFXP16104 143 aaPredicted RBP13.54□□□□□ -0.24
SEPSECS-201ENST00000358971 AK7Q96M32 723 aa13.54□□□□□ -0.24
SEPSECS-201ENST00000358971 FUCA2Q9BTY2 467 aa13.54□□□□□ -0.24
SEPSECS-201ENST00000358971 TCHHQ07283 1943 aa13.54□□□□□ -0.24
SEPSECS-201ENST00000358971 TDO2P48775 406 aa13.54□□□□□ -0.24
SEPSECS-201ENST00000358971 FBXO18Q8NFZ0 1043 aa13.54□□□□□ -0.24
SEPSECS-201ENST00000358971 CCDC171Q6TFL3 1326 aa13.54□□□□□ -0.24
SEPSECS-201ENST00000358971 LMAN1P49257 510 aa13.54□□□□□ -0.24
SEPSECS-201ENST00000358971 GOLGA5Q8TBA6 731 aa13.54□□□□□ -0.24
SEPSECS-201ENST00000358971 FAM200AQ8TCP9 573 aa13.54□□□□□ -0.24
SEPSECS-201ENST00000358971 ARGLU1Q9NWB6 273 aaPredicted RBP13.54□□□□□ -0.24
SEPSECS-201ENST00000358971 ARHGAP29Q52LW3 1261 aa13.53□□□□□ -0.24
SEPSECS-201ENST00000358971 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.53□□□□□ -0.24
SEPSECS-201ENST00000358971 PLEKHM2Q8IWE5 1019 aa13.53□□□□□ -0.24
SEPSECS-201ENST00000358971 SRCIN1Q9C0H9 1055 aa13.53□□□□□ -0.24
SEPSECS-201ENST00000358971 DONSONQ9NYP3 566 aa13.53□□□□□ -0.24
SEPSECS-201ENST00000358971 SATB1Q01826 763 aa13.53□□□□□ -0.24
SEPSECS-201ENST00000358971 DNAJC21Q5F1R6 531 aaKnown RBP13.53□□□□□ -0.24
SEPSECS-201ENST00000358971 TTC22Q5TAA0 569 aa13.53□□□□□ -0.24
SEPSECS-201ENST00000358971 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.24
SEPSECS-201ENST00000358971 OAS2P29728 719 aaKnown RBP13.52□□□□□ -0.24
SEPSECS-201ENST00000358971 MCM2P49736 904 aa13.52□□□□□ -0.24
SEPSECS-201ENST00000358971 RAD54L2Q9Y4B4 1467 aa13.52□□□□□ -0.24
SEPSECS-201ENST00000358971 EIF4G3O43432 1585 aaKnown RBP13.52□□□□□ -0.24
SEPSECS-201ENST00000358971 CCDC27Q2M243 656 aa13.52□□□□□ -0.24
SEPSECS-201ENST00000358971 EGFL6Q8IUX8 553 aa13.52□□□□□ -0.24
SEPSECS-201ENST00000358971 CLIP2Q9UDT6 1046 aa13.52□□□□□ -0.24
SEPSECS-201ENST00000358971 SUFUQ9UMX1 484 aa13.52□□□□□ -0.24
SEPSECS-201ENST00000358971 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.25
SEPSECS-201ENST00000358971 TMED8Q6PL24 325 aaPredicted RBP13.52□□□□□ -0.25
SEPSECS-201ENST00000358971 POLR3AO14802 1390 aaPredicted RBP13.52□□□□□ -0.25
SEPSECS-201ENST00000358971 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
SEPSECS-201ENST00000358971 MAGEA9P43362 315 aa13.51□□□□□ -0.25
SEPSECS-201ENST00000358971 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
SEPSECS-201ENST00000358971 CHMP3Q9Y3E7 222 aa13.51□□□□□ -0.25
SEPSECS-201ENST00000358971 KANK1Q14678 1352 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms