RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 GOLGA6L6A8MZA4 724 aa13.74□□□□□ -0.21
PSEN1-202ENST00000357710 LRPPRCP42704 1394 aaKnown RBP13.74□□□□□ -0.21
PSEN1-202ENST00000357710 SCAF11Q99590 1463 aaKnown RBP13.73□□□□□ -0.21
PSEN1-202ENST00000357710 ZNF853P0CG23 659 aa13.73□□□□□ -0.21
PSEN1-202ENST00000357710 DIAPH3Q9NSV4 1193 aa13.73□□□□□ -0.21
PSEN1-202ENST00000357710 MAPK8IP3Q9UPT6 1336 aa13.73□□□□□ -0.21
PSEN1-202ENST00000357710 UBR1Q8IWV7 1749 aa13.73□□□□□ -0.21
PSEN1-202ENST00000357710 KIF3CO14782 793 aa13.73□□□□□ -0.21
PSEN1-202ENST00000357710 NPC1L1Q9UHC9 1359 aa13.73□□□□□ -0.21
PSEN1-202ENST00000357710 U2AF2P26368 475 aaKnown RBP eCLIP13.72□□□□□ -0.21
PSEN1-202ENST00000357710 CASC1Q6TDU7 716 aa13.72□□□□□ -0.21
PSEN1-202ENST00000357710 EIF3AQ14152 1382 aaKnown RBP13.72□□□□□ -0.21
PSEN1-202ENST00000357710 EP400NLQ6ZTU2 488 aa13.72□□□□□ -0.21
PSEN1-202ENST00000357710 RNF217Q8TC41 542 aa13.72□□□□□ -0.21
PSEN1-202ENST00000357710 DDX41Q9UJV9 622 aaKnown RBP13.72□□□□□ -0.21
PSEN1-202ENST00000357710 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.71□□□□□ -0.21
PSEN1-202ENST00000357710 TDO2P48775 406 aa13.71□□□□□ -0.21
PSEN1-202ENST00000357710 TBC1D32Q96NH3 1257 aa13.71□□□□□ -0.21
PSEN1-202ENST00000357710 CRBNQ96SW2 442 aa13.71□□□□□ -0.21
PSEN1-202ENST00000357710 KNSTRNQ9Y448 316 aa13.71□□□□□ -0.21
PSEN1-202ENST00000357710 MYO3AQ8NEV4 1616 aa13.71□□□□□ -0.21
PSEN1-202ENST00000357710 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
PSEN1-202ENST00000357710 CTIFO43310 598 aaKnown RBP13.7□□□□□ -0.22
PSEN1-202ENST00000357710 GOLGA6L1Q8N7Z2 621 aa13.7□□□□□ -0.22
PSEN1-202ENST00000357710 ST20-MTHFSA0A0A6YYL1 179 aa13.7□□□□□ -0.22
PSEN1-202ENST00000357710 RAD51AP2Q09MP3 1159 aa13.7□□□□□ -0.22
PSEN1-202ENST00000357710 TRDNQ13061 729 aa13.7□□□□□ -0.22
PSEN1-202ENST00000357710 MUM1L1Q5H9M0 696 aa13.7□□□□□ -0.22
PSEN1-202ENST00000357710 CFAP70Q5T0N1 1121 aa13.7□□□□□ -0.22
PSEN1-202ENST00000357710 CCDC91Q7Z6B0 441 aa13.7□□□□□ -0.22
PSEN1-202ENST00000357710 KRT222Q8N1A0 295 aa13.7□□□□□ -0.22
PSEN1-202ENST00000357710 INSRP06213 1382 aa13.69□□□□□ -0.22
PSEN1-202ENST00000357710 REC8O95072 547 aa13.69□□□□□ -0.22
PSEN1-202ENST00000357710 ADGRB1O14514 1584 aa13.69□□□□□ -0.22
PSEN1-202ENST00000357710 CASQ1P31415 396 aa13.69□□□□□ -0.22
PSEN1-202ENST00000357710 CEBPAP49715 358 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-202ENST00000357710 GOLGA6L22H0YM25 854 aa13.68□□□□□ -0.22
PSEN1-202ENST00000357710 KLHL40Q2TBA0 621 aa13.68□□□□□ -0.22
PSEN1-202ENST00000357710 C14orf93Q9H972 538 aaKnown RBP13.68□□□□□ -0.22
PSEN1-202ENST00000357710 KIF7Q2M1P5 1343 aa13.68□□□□□ -0.22
PSEN1-202ENST00000357710 CHAF1AQ13111 956 aaPredicted RBP13.68□□□□□ -0.22
PSEN1-202ENST00000357710 RPAINQ86UA6 219 aa13.68□□□□□ -0.22
PSEN1-202ENST00000357710 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.68□□□□□ -0.22
PSEN1-202ENST00000357710 PIBF1Q8WXW3 757 aa13.68□□□□□ -0.22
PSEN1-202ENST00000357710 PRDM16Q9HAZ2 1276 aa13.68□□□□□ -0.22
PSEN1-202ENST00000357710 CTNNA3Q9UI47 895 aa13.68□□□□□ -0.22
PSEN1-202ENST00000357710 PPP1R12AO14974 1030 aaPredicted RBP13.67□□□□□ -0.22
PSEN1-202ENST00000357710 NUTM2DQ5VT03 806 aaPredicted RBP13.67□□□□□ -0.22
PSEN1-202ENST00000357710 SGSM3Q96HU1 749 aa13.67□□□□□ -0.22
PSEN1-202ENST00000357710 DDIT3P35638 169 aa13.66□□□□□ -0.22
PSEN1-202ENST00000357710 PNISRQ8TF01 805 aaKnown RBP13.66□□□□□ -0.22
PSEN1-202ENST00000357710 FAM210AQ96ND0 272 aa13.66□□□□□ -0.22
PSEN1-202ENST00000357710 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
PSEN1-202ENST00000357710 HDGFP51858 240 aaKnown RBP13.66□□□□□ -0.22
PSEN1-202ENST00000357710 FKBP5Q13451 457 aaPredicted RBP13.66□□□□□ -0.22
PSEN1-202ENST00000357710 ITFG2Q969R8 447 aa13.66□□□□□ -0.22
PSEN1-202ENST00000357710 SPTLC3Q9NUV7 552 aa13.66□□□□□ -0.22
PSEN1-202ENST00000357710 CYP2C19P33261 490 aa13.65□□□□□ -0.22
PSEN1-202ENST00000357710 SWT1Q5T5J6 900 aaKnown RBP13.65□□□□□ -0.22
PSEN1-202ENST00000357710 CFAP44Q96MT7 982 aa13.65□□□□□ -0.22
PSEN1-202ENST00000357710 TMEM2Q9UHN6 1383 aa13.65□□□□□ -0.22
PSEN1-202ENST00000357710 ZNF142P52746 1687 aaPredicted RBP13.65□□□□□ -0.22
PSEN1-202ENST00000357710 CEP170BQ9Y4F5 1589 aaPredicted RBP13.65□□□□□ -0.22
PSEN1-202ENST00000357710 CLEC17AQ6ZS10 378 aa13.65□□□□□ -0.22
PSEN1-202ENST00000357710 SKAP1Q86WV1 359 aa13.65□□□□□ -0.22
PSEN1-202ENST00000357710 CXorf56Q9H5V9 222 aa13.64□□□□□ -0.23
PSEN1-202ENST00000357710 ALKQ9UM73 1620 aa13.64□□□□□ -0.23
PSEN1-202ENST00000357710 ASXL1Q8IXJ9 1541 aa13.64□□□□□ -0.23
PSEN1-202ENST00000357710 GSCP56915 257 aaPredicted RBP13.64□□□□□ -0.23
PSEN1-202ENST00000357710 LIG1P18858 919 aa13.63□□□□□ -0.23
PSEN1-202ENST00000357710 LRCH2Q5VUJ6 765 aa13.63□□□□□ -0.23
PSEN1-202ENST00000357710 MRVI1Q9Y6F6 885 aa13.63□□□□□ -0.23
PSEN1-202ENST00000357710 SLIT1O75093 1534 aa13.63□□□□□ -0.23
PSEN1-202ENST00000357710 SETD1AO15047 1707 aaKnown RBP13.63□□□□□ -0.23
PSEN1-202ENST00000357710 ARHGEF28Q8N1W1 1705 aaKnown RBP13.63□□□□□ -0.23
PSEN1-202ENST00000357710 SUFUQ9UMX1 484 aa13.63□□□□□ -0.23
PSEN1-202ENST00000357710 NRXN3Q9Y4C0 1643 aa13.62□□□□□ -0.23
PSEN1-202ENST00000357710 RAB3GAP1Q15042 981 aa13.62□□□□□ -0.23
PSEN1-202ENST00000357710 JMYQ8N9B5 988 aa13.62□□□□□ -0.23
PSEN1-202ENST00000357710 TESK2Q96S53 571 aa13.62□□□□□ -0.23
PSEN1-202ENST00000357710 NBPF3Q9H094 633 aa13.62□□□□□ -0.23
PSEN1-202ENST00000357710 CCDC189A1A4V9 331 aa13.62□□□□□ -0.23
PSEN1-202ENST00000357710 KLHL33A6NCF5 533 aa13.62□□□□□ -0.23
PSEN1-202ENST00000357710 HNRNPH2P55795 449 aaKnown RBP13.62□□□□□ -0.23
PSEN1-202ENST00000357710 TMF1P82094 1093 aa13.62□□□□□ -0.23
PSEN1-202ENST00000357710 DEF6Q9H4E7 631 aa13.62□□□□□ -0.23
PSEN1-202ENST00000357710 FAM53CQ9NYF3 392 aa13.62□□□□□ -0.23
PSEN1-202ENST00000357710 QRICH2Q9H0J4 1663 aa13.62□□□□□ -0.23
PSEN1-202ENST00000357710 ARHGAP23Q9P227 1491 aa13.61□□□□□ -0.23
PSEN1-202ENST00000357710 C11orf91Q3C1V1 193 aa13.61□□□□□ -0.23
PSEN1-202ENST00000357710 BRD4O60885 1362 aaPredicted RBP13.61□□□□□ -0.23
PSEN1-202ENST00000357710 NOLC1Q14978 699 aaKnown RBP eCLIP13.61□□□□□ -0.23
PSEN1-202ENST00000357710 STK26Q9P289 416 aa13.61□□□□□ -0.23
PSEN1-202ENST00000357710 JRKLQ9Y4A0 524 aa13.61□□□□□ -0.23
PSEN1-202ENST00000357710 SBNO2Q9Y2G9 1366 aa13.61□□□□□ -0.23
PSEN1-202ENST00000357710 A0A1B0GUL7 405 aa13.6□□□□□ -0.23
PSEN1-202ENST00000357710 NOM1Q5C9Z4 860 aaKnown RBP13.6□□□□□ -0.23
PSEN1-202ENST00000357710 HSCBQ8IWL3 235 aa13.6□□□□□ -0.23
PSEN1-202ENST00000357710 TNPO1Q92973 898 aaKnown RBP13.6□□□□□ -0.23
PSEN1-202ENST00000357710 ATP2B1P20020 1258 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms