RNA–Protein interactions for RNA: ENST00000356456.9

ZNF140-203, Transcript of zinc finger protein 140, humanhuman

TSL 3

Gene ZNF140, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140-203ENST00000356456 SHANK3Q9BYB0 1731 aa29.91■■■□□ 2.38
ZNF140-203ENST00000356456 ANKRD36BQ8N2N9 1353 aa29.9■■■□□ 2.38
ZNF140-203ENST00000356456 HOXC9P31274 260 aa29.9■■■□□ 2.38
ZNF140-203ENST00000356456 GPR162Q16538 588 aa29.9■■■□□ 2.38
ZNF140-203ENST00000356456 KLHL34Q8N239 644 aa29.89■■■□□ 2.38
ZNF140-203ENST00000356456 MEGF6O75095 1541 aa29.89■■■□□ 2.38
ZNF140-203ENST00000356456 RGPD2P0DJD1 1756 aa29.88■■■□□ 2.37
ZNF140-203ENST00000356456 TESK2Q96S53 571 aa29.88■■■□□ 2.37
ZNF140-203ENST00000356456 TFCP2L1Q9NZI6 479 aa29.88■■■□□ 2.37
ZNF140-203ENST00000356456 CEP350Q5VT06 3117 aa29.88■■■□□ 2.37
ZNF140-203ENST00000356456 LY75O60449 1722 aa29.88■■■□□ 2.37
ZNF140-203ENST00000356456 POLD1P28340 1107 aa29.87■■■□□ 2.37
ZNF140-203ENST00000356456 COG3Q96JB2 828 aa29.87■■■□□ 2.37
ZNF140-203ENST00000356456 C1QTNF8P60827 252 aa29.85■■■□□ 2.37
ZNF140-203ENST00000356456 ZCRB1Q8TBF4 217 aaKnown RBP29.85■■■□□ 2.37
ZNF140-203ENST00000356456 AMPHP49418 695 aa29.84■■■□□ 2.37
ZNF140-203ENST00000356456 NLGN2Q8NFZ4 835 aa29.84■■■□□ 2.37
ZNF140-203ENST00000356456 TONSLQ96HA7 1378 aa29.83■■■□□ 2.37
ZNF140-203ENST00000356456 SENP3-EIF4A1A0A087X0R7 540 aa29.83■■■□□ 2.37
ZNF140-203ENST00000356456 ST20-MTHFSA0A0A6YYL1 179 aa29.81■■■□□ 2.36
ZNF140-203ENST00000356456 PELP1Q8IZL8 1130 aaKnown RBP29.81■■■□□ 2.36
ZNF140-203ENST00000356456 CCER1Q8TC90 406 aaPredicted RBP29.8■■■□□ 2.36
ZNF140-203ENST00000356456 CCNL1Q9UK58 526 aaPredicted RBP29.8■■■□□ 2.36
ZNF140-203ENST00000356456 NBPF6Q5VWK0 638 aa29.79■■■□□ 2.36
ZNF140-203ENST00000356456 NBPF4Q96M43 638 aa29.79■■■□□ 2.36
ZNF140-203ENST00000356456 RTL1A6NKG5 1358 aa29.78■■■□□ 2.36
ZNF140-203ENST00000356456 RRS1Q15050 365 aaKnown RBP29.78■■■□□ 2.36
ZNF140-203ENST00000356456 USHBP1Q8N6Y0 703 aa29.78■■■□□ 2.36
ZNF140-203ENST00000356456 COL23A1Q86Y22 540 aaPredicted RBP29.76■■■□□ 2.35
ZNF140-203ENST00000356456 YBX3P16989 372 aaKnown RBP eCLIP29.74■■■□□ 2.35
ZNF140-203ENST00000356456 USP47Q96K76 1375 aa29.74■■■□□ 2.35
ZNF140-203ENST00000356456 FYB1O15117 783 aa29.72■■■□□ 2.35
ZNF140-203ENST00000356456 MSH5O43196 834 aa29.72■■■□□ 2.35
ZNF140-203ENST00000356456 GGNBP2Q9H3C7 697 aa29.72■■■□□ 2.35
ZNF140-203ENST00000356456 MSL1Q68DK7 614 aa29.71■■■□□ 2.35
ZNF140-203ENST00000356456 CGNL1Q0VF96 1302 aa29.71■■■□□ 2.35
ZNF140-203ENST00000356456 GIGYF1O75420 1035 aaPredicted RBP29.7■■■□□ 2.35
ZNF140-203ENST00000356456 CLSPNQ9HAW4 1339 aa29.7■■■□□ 2.34
ZNF140-203ENST00000356456 RAPGEF4Q8WZA2 1011 aa29.69■■■□□ 2.34
ZNF140-203ENST00000356456 C5P01031 1676 aa29.68■■■□□ 2.34
ZNF140-203ENST00000356456 SMG6Q86US8 1419 aaKnown RBP29.68■■■□□ 2.34
ZNF140-203ENST00000356456 HSP90AB2PQ58FF8 381 aa29.66■■■□□ 2.34
ZNF140-203ENST00000356456 TATP17735 454 aaPredicted RBP29.65■■■□□ 2.34
ZNF140-203ENST00000356456 INSRP06213 1382 aa29.64■■■□□ 2.34
ZNF140-203ENST00000356456 SLC24A1O60721 1099 aa29.64■■■□□ 2.34
ZNF140-203ENST00000356456 PALLDQ8WX93 1383 aa29.64■■■□□ 2.33
ZNF140-203ENST00000356456 GRIN3BO60391 1043 aa29.63■■■□□ 2.33
ZNF140-203ENST00000356456 PCDH11XQ9BZA7 1347 aa29.63■■■□□ 2.33
ZNF140-203ENST00000356456 PCDH11YQ9BZA8 1340 aa29.63■■■□□ 2.33
ZNF140-203ENST00000356456 TOGARAM1Q9Y4F4 1720 aa29.62■■■□□ 2.33
ZNF140-203ENST00000356456 TAF1LQ8IZX4 1826 aa29.61■■■□□ 2.33
ZNF140-203ENST00000356456 CYP27B1O15528 508 aa29.61■■■□□ 2.33
ZNF140-203ENST00000356456 FLT4P35916 1363 aa29.61■■■□□ 2.33
ZNF140-203ENST00000356456 KIF20BQ96Q89 1820 aa29.59■■■□□ 2.33
ZNF140-203ENST00000356456 MPRIPQ6WCQ1 1025 aa29.59■■■□□ 2.33
ZNF140-203ENST00000356456 AMIGO3Q86WK7 504 aa29.59■■■□□ 2.33
ZNF140-203ENST00000356456 TMF1P82094 1093 aa29.58■■■□□ 2.33
ZNF140-203ENST00000356456 CD2APQ9Y5K6 639 aa29.57■■■□□ 2.32
ZNF140-203ENST00000356456 ATP10DQ9P241 1426 aa29.56■■■□□ 2.32
ZNF140-203ENST00000356456 KIF24Q5T7B8 1368 aa29.56■■■□□ 2.32
ZNF140-203ENST00000356456 C4BP0C0L5 1744 aa29.56■■■□□ 2.32
ZNF140-203ENST00000356456 FLAD1Q8NFF5 587 aa29.55■■■□□ 2.32
ZNF140-203ENST00000356456 ITGB4P16144 1822 aa29.55■■■□□ 2.32
ZNF140-203ENST00000356456 PKD1L3Q7Z443 1732 aa29.54■■■□□ 2.32
ZNF140-203ENST00000356456 SMIM5Q71RC9 77 aa29.54■■■□□ 2.32
ZNF140-203ENST00000356456 CARD14Q9BXL6 1004 aa29.53■■■□□ 2.32
ZNF140-203ENST00000356456 EMILIN1Q9Y6C2 1016 aa29.53■■■□□ 2.32
ZNF140-203ENST00000356456 NCAPD2Q15021 1401 aa29.52■■■□□ 2.32
ZNF140-203ENST00000356456 PIGBQ92521 554 aa29.51■■■□□ 2.31
ZNF140-203ENST00000356456 AK7Q96M32 723 aa29.51■■■□□ 2.31
ZNF140-203ENST00000356456 SMARCC1Q92922 1105 aaPredicted RBP29.5■■■□□ 2.31
ZNF140-203ENST00000356456 UBR3Q6ZT12 1888 aa29.5■■■□□ 2.31
ZNF140-203ENST00000356456 PHF14O94880 888 aa29.49■■■□□ 2.31
ZNF140-203ENST00000356456 ADCY9O60503 1353 aa29.49■■■□□ 2.31
ZNF140-203ENST00000356456 MAP2P11137 1827 aaKnown RBP29.48■■■□□ 2.31
ZNF140-203ENST00000356456 NSD3Q9BZ95 1437 aa29.47■■■□□ 2.31
ZNF140-203ENST00000356456 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.47■■■□□ 2.31
ZNF140-203ENST00000356456 HMGB2P26583 209 aaKnown RBP29.47■■■□□ 2.31
ZNF140-203ENST00000356456 NKX1-1Q15270 411 aaPredicted RBP29.47■■■□□ 2.31
ZNF140-203ENST00000356456 LINC00116Q8NCU8 138 aa29.45■■■□□ 2.31
ZNF140-203ENST00000356456 WWC3Q9ULE0 1092 aa29.45■■■□□ 2.31
ZNF140-203ENST00000356456 ANKRD26Q9UPS8 1709 aa29.45■■■□□ 2.3
ZNF140-203ENST00000356456 IGSF1Q8N6C5 1336 aa29.44■■■□□ 2.3
ZNF140-203ENST00000356456 LOC102724428A0A0B4J2F2 783 aa29.43■■■□□ 2.3
ZNF140-203ENST00000356456 SIK1P57059 783 aa29.43■■■□□ 2.3
ZNF140-203ENST00000356456 CDCA8Q53HL2 280 aa29.43■■■□□ 2.3
ZNF140-203ENST00000356456 PPM1GO15355 546 aaPredicted RBP29.42■■■□□ 2.3
ZNF140-203ENST00000356456 GPBP1L1Q9HC44 474 aaPredicted RBP29.42■■■□□ 2.3
ZNF140-203ENST00000356456 SSFA2P28290 1259 aa29.41■■■□□ 2.3
ZNF140-203ENST00000356456 SPG7Q9UQ90 795 aa29.41■■■□□ 2.3
ZNF140-203ENST00000356456 ITPK1Q13572 414 aa29.4■■■□□ 2.3
ZNF140-203ENST00000356456 ZNF526Q8TF50 670 aaPredicted RBP29.4■■■□□ 2.3
ZNF140-203ENST00000356456 EYA1Q99502 592 aa29.4■■■□□ 2.3
ZNF140-203ENST00000356456 ASAP1Q9ULH1 1129 aa29.39■■■□□ 2.3
ZNF140-203ENST00000356456 WASHC2AQ641Q2 1341 aa29.39■■■□□ 2.3
ZNF140-203ENST00000356456 TMOD3Q9NYL9 352 aa29.37■■■□□ 2.29
ZNF140-203ENST00000356456 GNPATO15228 680 aa29.35■■■□□ 2.29
ZNF140-203ENST00000356456 PHKG2P15735 406 aa29.35■■■□□ 2.29
ZNF140-203ENST00000356456 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.35■■■□□ 2.29
ZNF140-203ENST00000356456 IFFO2Q5TF58 517 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms