RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 CSPP1Q1MSJ5 1256 aa18.66■□□□□ 0.58
VAT1-201ENST00000355653 FAM83GA6ND36 823 aa18.65■□□□□ 0.58
VAT1-201ENST00000355653 FOXD4L6Q3SYB3 417 aaPredicted RBP18.65■□□□□ 0.58
VAT1-201ENST00000355653 FOXD4L3Q6VB84 417 aaPredicted RBP18.65■□□□□ 0.58
VAT1-201ENST00000355653 POLKQ9UBT6 870 aa18.65■□□□□ 0.58
VAT1-201ENST00000355653 NOL8Q76FK4 1167 aaKnown RBP18.65■□□□□ 0.58
VAT1-201ENST00000355653 DCTN1Q14203 1278 aa18.64■□□□□ 0.57
VAT1-201ENST00000355653 MPNDQ8N594 471 aa18.64■□□□□ 0.57
VAT1-201ENST00000355653 REREQ9P2R6 1566 aa18.64■□□□□ 0.57
VAT1-201ENST00000355653 CD163L1Q9NR16 1453 aa18.64■□□□□ 0.57
VAT1-201ENST00000355653 REC8O95072 547 aa18.63■□□□□ 0.57
VAT1-201ENST00000355653 NEK4P51957 841 aa18.63■□□□□ 0.57
VAT1-201ENST00000355653 KNDC1Q76NI1 1749 aa18.63■□□□□ 0.57
VAT1-201ENST00000355653 FBXO31Q5XUX0 539 aaPredicted RBP18.62■□□□□ 0.57
VAT1-201ENST00000355653 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
VAT1-201ENST00000355653 EMILIN1Q9Y6C2 1016 aa18.62■□□□□ 0.57
VAT1-201ENST00000355653 DNTTIP2Q5QJE6 756 aaKnown RBP18.62■□□□□ 0.57
VAT1-201ENST00000355653 SASS6Q6UVJ0 657 aa18.62■□□□□ 0.57
VAT1-201ENST00000355653 CDK19Q9BWU1 502 aa18.62■□□□□ 0.57
VAT1-201ENST00000355653 SLC52A1Q9NWF4 448 aa18.62■□□□□ 0.57
VAT1-201ENST00000355653 DYNC1I1O14576 645 aa18.61■□□□□ 0.57
VAT1-201ENST00000355653 MCM5P33992 734 aa18.61■□□□□ 0.57
VAT1-201ENST00000355653 ZFYVE9O95405 1425 aa18.61■□□□□ 0.57
VAT1-201ENST00000355653 ZNF853P0CG23 659 aa18.61■□□□□ 0.57
VAT1-201ENST00000355653 TPRNQ4KMQ1 711 aa18.61■□□□□ 0.57
VAT1-201ENST00000355653 ANKRD44Q8N8A2 993 aa18.61■□□□□ 0.57
VAT1-201ENST00000355653 ANKRD26Q9UPS8 1709 aa18.61■□□□□ 0.57
VAT1-201ENST00000355653 ERC2O15083 957 aa18.6■□□□□ 0.57
VAT1-201ENST00000355653 MBD3O95983 291 aa18.59■□□□□ 0.57
VAT1-201ENST00000355653 KRT24Q2M2I5 525 aa18.59■□□□□ 0.57
VAT1-201ENST00000355653 CEP85Q6P2H3 762 aa18.59■□□□□ 0.57
VAT1-201ENST00000355653 TMX3Q96JJ7 454 aa18.59■□□□□ 0.57
VAT1-201ENST00000355653 PRDM10Q9NQV6 1147 aa18.59■□□□□ 0.57
VAT1-201ENST00000355653 TSPY26PQ9H489 355 aa18.59■□□□□ 0.57
VAT1-201ENST00000355653 PRDM4Q9UKN5 801 aa18.59■□□□□ 0.57
VAT1-201ENST00000355653 PIK3C2BO00750 1634 aa18.59■□□□□ 0.57
VAT1-201ENST00000355653 YEATS2Q9ULM3 1422 aa18.58■□□□□ 0.56
VAT1-201ENST00000355653 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.56
VAT1-201ENST00000355653 TSHZ3Q63HK5 1081 aa18.58■□□□□ 0.56
VAT1-201ENST00000355653 GDPD2Q9HCC8 539 aa18.58■□□□□ 0.56
VAT1-201ENST00000355653 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.58■□□□□ 0.561e-8■■■■■ 28.3
VAT1-201ENST00000355653 JARID2Q92833 1246 aaPredicted RBP18.57■□□□□ 0.56
VAT1-201ENST00000355653 PODXL2Q9NZ53 605 aa18.57■□□□□ 0.56
VAT1-201ENST00000355653 ATP10DQ9P241 1426 aa18.57■□□□□ 0.56
VAT1-201ENST00000355653 RPAP2Q8IXW5 612 aaPredicted RBP18.57■□□□□ 0.56
VAT1-201ENST00000355653 MEIS3Q99687 375 aa18.57■□□□□ 0.56
VAT1-201ENST00000355653 PTPRMP28827 1452 aa18.56■□□□□ 0.56
VAT1-201ENST00000355653 YTHDC2Q9H6S0 1430 aaKnown RBP18.56■□□□□ 0.56
VAT1-201ENST00000355653 ZNF830Q96NB3 372 aaPredicted RBP18.56■□□□□ 0.56
VAT1-201ENST00000355653 MSH6P52701 1360 aa18.56■□□□□ 0.56
VAT1-201ENST00000355653 MTERF4Q7Z6M4 381 aaKnown RBP18.56■□□□□ 0.56
VAT1-201ENST00000355653 LMOD3Q0VAK6 560 aa18.55■□□□□ 0.56
VAT1-201ENST00000355653 WAPLQ7Z5K2 1190 aa18.55■□□□□ 0.56
VAT1-201ENST00000355653 TSC1Q92574 1164 aa18.55■□□□□ 0.56
VAT1-201ENST00000355653 STAG3Q9UJ98 1225 aa18.55■□□□□ 0.56
VAT1-201ENST00000355653 CDC42BPGQ6DT37 1551 aa18.55■□□□□ 0.56
VAT1-201ENST00000355653 DIP2CQ9Y2E4 1556 aa18.55■□□□□ 0.56
VAT1-201ENST00000355653 RIMS2Q9UQ26 1411 aa18.55■□□□□ 0.56
VAT1-201ENST00000355653 IL13P35225 146 aa18.54■□□□□ 0.56
VAT1-201ENST00000355653 BRD1O95696 1058 aa18.54■□□□□ 0.56
VAT1-201ENST00000355653 SYAP1Q96A49 352 aaPredicted RBP18.53■□□□□ 0.56
VAT1-201ENST00000355653 ZRANB1Q9UGI0 708 aa18.53■□□□□ 0.56
VAT1-201ENST00000355653 KIF20BQ96Q89 1820 aa18.53■□□□□ 0.56
VAT1-201ENST00000355653 GADD45BO75293 160 aaPredicted RBP18.53■□□□□ 0.56
VAT1-201ENST00000355653 RTL1A6NKG5 1358 aa18.53■□□□□ 0.56
VAT1-201ENST00000355653 RRS1Q15050 365 aaKnown RBP18.52■□□□□ 0.56
VAT1-201ENST00000355653 KIF24Q5T7B8 1368 aa18.52■□□□□ 0.56
VAT1-201ENST00000355653 PALD1Q9ULE6 856 aa18.52■□□□□ 0.56
VAT1-201ENST00000355653 NEO1Q92859 1461 aa18.52■□□□□ 0.55
VAT1-201ENST00000355653 MAP2P11137 1827 aaKnown RBP18.51■□□□□ 0.55
VAT1-201ENST00000355653 SLC4A10Q6U841 1118 aa18.51■□□□□ 0.55
VAT1-201ENST00000355653 NME9Q86XW9 330 aa18.51■□□□□ 0.55
VAT1-201ENST00000355653 C17orf53Q8N3J3 647 aaPredicted RBP18.51■□□□□ 0.55
VAT1-201ENST00000355653 ANO2Q9NQ90 1003 aa18.51■□□□□ 0.55
VAT1-201ENST00000355653 USP25Q9UHP3 1055 aa18.51■□□□□ 0.55
VAT1-201ENST00000355653 PDE1AP54750 535 aa18.51■□□□□ 0.55
VAT1-201ENST00000355653 UPF3BQ9BZI7 483 aaKnown RBP18.51■□□□□ 0.55
VAT1-201ENST00000355653 ARHGEF40Q8TER5 1519 aa18.5■□□□□ 0.55
VAT1-201ENST00000355653 MYO5BQ9ULV0 1848 aa18.5■□□□□ 0.55
VAT1-201ENST00000355653 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.5■□□□□ 0.55
VAT1-201ENST00000355653 SMAP1Q8IYB5 467 aaPredicted RBP18.5■□□□□ 0.55
VAT1-201ENST00000355653 EXOC6BQ9Y2D4 811 aa18.5■□□□□ 0.55
VAT1-201ENST00000355653 FAM177BA6PVY3 158 aa18.49■□□□□ 0.55
VAT1-201ENST00000355653 RILPL2Q969X0 211 aa18.49■□□□□ 0.55
VAT1-201ENST00000355653 TRIM6-TRIM34B2RNG4 842 aa18.49■□□□□ 0.55
VAT1-201ENST00000355653 MCCP23508 829 aa18.49■□□□□ 0.55
VAT1-201ENST00000355653 USP48Q86UV5 1035 aa18.49■□□□□ 0.55
VAT1-201ENST00000355653 MYRIPQ8NFW9 859 aa18.49■□□□□ 0.55
VAT1-201ENST00000355653 TTC12Q9H892 705 aaPredicted RBP18.49■□□□□ 0.55
VAT1-201ENST00000355653 ZHX1Q9UKY1 873 aaPredicted RBP18.49■□□□□ 0.55
VAT1-201ENST00000355653 HMMRO75330 724 aa18.48■□□□□ 0.55
VAT1-201ENST00000355653 PHF14O94880 888 aa18.48■□□□□ 0.55
VAT1-201ENST00000355653 MCM2P49736 904 aa18.48■□□□□ 0.55
VAT1-201ENST00000355653 PLCB2Q00722 1185 aa18.48■□□□□ 0.55
VAT1-201ENST00000355653 MCM10Q7L590 875 aa18.48■□□□□ 0.55
VAT1-201ENST00000355653 DLG5Q8TDM6 1919 aa18.48■□□□□ 0.55
VAT1-201ENST00000355653 RGS12O14924 1447 aa18.48■□□□□ 0.55
VAT1-201ENST00000355653 ESYT1Q9BSJ8 1104 aa18.48■□□□□ 0.55
VAT1-201ENST00000355653 CCDC94Q9BW85 323 aaPredicted RBP18.48■□□□□ 0.55
VAT1-201ENST00000355653 TMEM131LA2VDJ0 1609 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms