RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 TWISTNBQ3B726 338 aaPredicted RBP32.92■■■□□ 2.86
CLK2-201ENST00000355560 NBPF6Q5VWK0 638 aa32.92■■■□□ 2.86
CLK2-201ENST00000355560 NBPF4Q96M43 638 aa32.92■■■□□ 2.86
CLK2-201ENST00000355560 ATF7IPQ6VMQ6 1270 aa32.92■■■□□ 2.86
CLK2-201ENST00000355560 RBM19Q9Y4C8 960 aaKnown RBP32.92■■■□□ 2.86
CLK2-201ENST00000355560 CHL1O00533 1208 aa32.91■■■□□ 2.86
CLK2-201ENST00000355560 C8orf58Q8NAV2 365 aa32.91■■■□□ 2.86
CLK2-201ENST00000355560 PXDNQ92626 1479 aa32.91■■■□□ 2.86
CLK2-201ENST00000355560 TNS3Q68CZ2 1445 aa32.9■■■□□ 2.86
CLK2-201ENST00000355560 MVPQ14764 893 aaKnown RBP32.89■■■□□ 2.86
CLK2-201ENST00000355560 BRPF1P55201 1214 aaPredicted RBP32.88■■■□□ 2.85
CLK2-201ENST00000355560 IPO8O15397 1037 aaKnown RBP32.87■■■□□ 2.85
CLK2-201ENST00000355560 AAMPQ13685 434 aa32.87■■■□□ 2.85
CLK2-201ENST00000355560 LRRC59Q96AG4 307 aaKnown RBP32.87■■■□□ 2.85
CLK2-201ENST00000355560 BRINP3Q76B58 766 aa32.87■■■□□ 2.85
CLK2-201ENST00000355560 LRRC37A3O60309 1634 aa32.86■■■□□ 2.85
CLK2-201ENST00000355560 GNAT3A8MTJ3 354 aa32.86■■■□□ 2.85
CLK2-201ENST00000355560 HTATSF1O43719 755 aaKnown RBP32.86■■■□□ 2.85
CLK2-201ENST00000355560 MAP3K5Q99683 1374 aa32.85■■■□□ 2.85
CLK2-201ENST00000355560 ZC3H6P61129 1189 aaKnown RBP32.84■■■□□ 2.85
CLK2-201ENST00000355560 ANKRD24Q8TF21 1146 aa32.84■■■□□ 2.85
CLK2-201ENST00000355560 AXIN2Q9Y2T1 843 aa32.84■■■□□ 2.85
CLK2-201ENST00000355560 MRPL50Q8N5N7 158 aaKnown RBP32.83■■■□□ 2.85
CLK2-201ENST00000355560 RGPD5Q99666 1765 aa32.83■■■□□ 2.85
CLK2-201ENST00000355560 SPATA31A3Q5VYP0 1347 aa32.82■■■□□ 2.84
CLK2-201ENST00000355560 KIAA0232Q92628 1395 aa32.81■■■□□ 2.84
CLK2-201ENST00000355560 NCAPD2Q15021 1401 aa32.81■■■□□ 2.84
CLK2-201ENST00000355560 KRT24Q2M2I5 525 aa32.8■■■□□ 2.84
CLK2-201ENST00000355560 SLAIN2Q9P270 581 aa32.8■■■□□ 2.84
CLK2-201ENST00000355560 CAMTA1Q9Y6Y1 1673 aa32.8■■■□□ 2.84
CLK2-201ENST00000355560 TCERG1O14776 1098 aaKnown RBP32.8■■■□□ 2.84
CLK2-201ENST00000355560 ITPRIPQ8IWB1 547 aa32.8■■■□□ 2.84
CLK2-201ENST00000355560 TSPYL4Q9UJ04 414 aa32.8■■■□□ 2.84
CLK2-201ENST00000355560 MIS18AQ9NYP9 233 aa32.79■■■□□ 2.84
CLK2-201ENST00000355560 CRYBG1Q9Y4K1 1723 aa32.79■■■□□ 2.84
CLK2-201ENST00000355560 HAP1P54257 671 aaPredicted RBP32.78■■■□□ 2.84
CLK2-201ENST00000355560 SKAP1Q86WV1 359 aa32.78■■■□□ 2.84
CLK2-201ENST00000355560 CABLES1Q8TDN4 633 aa32.78■■■□□ 2.84
CLK2-201ENST00000355560 IGHDP01880 384 aa32.77■■■□□ 2.84
CLK2-201ENST00000355560 TMEM57Q8N5G2 664 aa32.77■■■□□ 2.84
CLK2-201ENST00000355560 DDX19BQ9UMR2 479 aa32.77■■■□□ 2.84
CLK2-201ENST00000355560 ERBB3P21860 1342 aa32.77■■■□□ 2.84
CLK2-201ENST00000355560 IL17REQ8NFR9 667 aa32.75■■■□□ 2.83
CLK2-201ENST00000355560 ARHGAP45Q92619 1136 aa32.75■■■□□ 2.83
CLK2-201ENST00000355560 PCDHB15Q9Y5E8 787 aa32.75■■■□□ 2.83
CLK2-201ENST00000355560 COL18A1P39060 1754 aa32.72■■■□□ 2.83
CLK2-201ENST00000355560 LMO7Q8WWI1 1683 aa32.7■■■□□ 2.83
CLK2-201ENST00000355560 SOS2Q07890 1332 aaPredicted RBP32.7■■■□□ 2.82
CLK2-201ENST00000355560 PLEKHO1Q53GL0 409 aaPredicted RBP32.69■■■□□ 2.82
CLK2-201ENST00000355560 AMOTQ4VCS5 1084 aa32.68■■■□□ 2.82
CLK2-201ENST00000355560 ABCC6O95255 1503 aa32.68■■■□□ 2.82
CLK2-201ENST00000355560 CEMIPQ8WUJ3 1361 aa32.68■■■□□ 2.82
CLK2-201ENST00000355560 ZNF530Q6P9A1 599 aaPredicted RBP32.68■■■□□ 2.82
CLK2-201ENST00000355560 TAF7Q15545 349 aaPredicted RBP32.66■■■□□ 2.82
CLK2-201ENST00000355560 ABCC4O15439 1325 aa32.66■■■□□ 2.82
CLK2-201ENST00000355560 AKAP4Q5JQC9 854 aa32.65■■■□□ 2.82
CLK2-201ENST00000355560 CPDO75976 1380 aa32.65■■■□□ 2.82
CLK2-201ENST00000355560 CHRNA2Q15822 529 aa32.65■■■□□ 2.82
CLK2-201ENST00000355560 API5Q9BZZ5 524 aaKnown RBP32.65■■■□□ 2.82
CLK2-201ENST00000355560 BABAM1Q9NWV8 329 aa32.64■■■□□ 2.82
CLK2-201ENST00000355560 ZBTB40Q9NUA8 1239 aa32.63■■■□□ 2.81
CLK2-201ENST00000355560 NLRP2Q9NX02 1062 aa32.63■■■□□ 2.81
CLK2-201ENST00000355560 RWDD1Q9H446 243 aaPredicted RBP32.62■■■□□ 2.81
CLK2-201ENST00000355560 FAM208AQ9UK61 1670 aaKnown RBP32.62■■■□□ 2.81
CLK2-201ENST00000355560 LGR6Q9HBX8 967 aa32.61■■■□□ 2.81
CLK2-201ENST00000355560 C1orf141Q5JVX7 400 aa32.6■■■□□ 2.81
CLK2-201ENST00000355560 NHSL1Q5SYE7 1610 aa32.6■■■□□ 2.81
CLK2-201ENST00000355560 CSB-PGBD3P0DP91 1061 aa32.59■■■□□ 2.81
CLK2-201ENST00000355560 VIRMAQ69YN4 1812 aaKnown RBP32.59■■■□□ 2.81
CLK2-201ENST00000355560 RGS3P49796 1198 aa32.58■■■□□ 2.81
CLK2-201ENST00000355560 MPRIPQ6WCQ1 1025 aa32.57■■■□□ 2.8
CLK2-201ENST00000355560 RAPGEF4Q8WZA2 1011 aa32.57■■■□□ 2.8
CLK2-201ENST00000355560 SLC4A2P04920 1241 aa32.56■■■□□ 2.8
CLK2-201ENST00000355560 RGS12O14924 1447 aa32.56■■■□□ 2.8
CLK2-201ENST00000355560 PTPRCP08575 1304 aa32.56■■■□□ 2.8
CLK2-201ENST00000355560 ABCA3Q99758 1704 aa32.55■■■□□ 2.8
CLK2-201ENST00000355560 CHMP4BQ9H444 224 aaKnown RBP32.55■■■□□ 2.8
CLK2-201ENST00000355560 ZBTB7BO15156 539 aaPredicted RBP32.54■■■□□ 2.8
CLK2-201ENST00000355560 PDE4AP27815 886 aa32.54■■■□□ 2.8
CLK2-201ENST00000355560 TEFQ10587 303 aa32.54■■■□□ 2.8
CLK2-201ENST00000355560 KDM3BQ7LBC6 1761 aa32.54■■■□□ 2.8
CLK2-201ENST00000355560 OVOS2A0A0G2JMS6 1433 aa32.53■■■□□ 2.8
CLK2-201ENST00000355560 HDAC1Q13547 482 aaPredicted RBP32.53■■■□□ 2.8
CLK2-201ENST00000355560 SOS1Q07889 1333 aaPredicted RBP32.53■■■□□ 2.8
CLK2-201ENST00000355560 PRDM11Q9NQV5 511 aa32.53■■■□□ 2.8
CLK2-201ENST00000355560 MEGF6O75095 1541 aa32.52■■■□□ 2.8
CLK2-201ENST00000355560 RNMTO43148 476 aaKnown RBP32.52■■■□□ 2.8
CLK2-201ENST00000355560 STK31Q9BXU1 1019 aa32.51■■■□□ 2.79
CLK2-201ENST00000355560 TATP17735 454 aaPredicted RBP32.5■■■□□ 2.79
CLK2-201ENST00000355560 BACH2Q9BYV9 841 aa32.5■■■□□ 2.79
CLK2-201ENST00000355560 CCDC30Q5VVM6 783 aa32.5■■■□□ 2.79
CLK2-201ENST00000355560 INTS3Q68E01 1043 aaKnown RBP32.48■■■□□ 2.79
CLK2-201ENST00000355560 ADAMTS7Q9UKP4 1686 aa32.47■■■□□ 2.79
CLK2-201ENST00000355560 BTBD11A6QL63 1104 aa32.47■■■□□ 2.79
CLK2-201ENST00000355560 G2E3Q7L622 706 aa32.46■■■□□ 2.79
CLK2-201ENST00000355560 PDZRN3Q9UPQ7 1066 aa32.46■■■□□ 2.79
CLK2-201ENST00000355560 EIF4A1P60842 406 aaKnown RBP32.45■■■□□ 2.79
CLK2-201ENST00000355560 NECTIN2Q92692 538 aa32.45■■■□□ 2.79
CLK2-201ENST00000355560 SPG7Q9UQ90 795 aa32.45■■■□□ 2.78
CLK2-201ENST00000355560 CACNA1FO60840 1977 aa32.45■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms