RNA–Protein interactions for RNA: ENST00000355445.7

TMEM116-201, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-201ENST00000355445 STK32BQ9NY57 414 aa11.25□□□□□ -0.61
TMEM116-201ENST00000355445 BTAF1O14981 1849 aa11.25□□□□□ -0.61
TMEM116-201ENST00000355445 USP31Q70CQ4 1352 aa11.24□□□□□ -0.61
TMEM116-201ENST00000355445 SBNO2Q9Y2G9 1366 aa11.24□□□□□ -0.61
TMEM116-201ENST00000355445 EXOC5O00471 708 aa11.24□□□□□ -0.61
TMEM116-201ENST00000355445 SLC15A2Q16348 729 aa11.24□□□□□ -0.61
TMEM116-201ENST00000355445 ERBB3P21860 1342 aa11.24□□□□□ -0.61
TMEM116-201ENST00000355445 NME9Q86XW9 330 aa11.23□□□□□ -0.61
TMEM116-201ENST00000355445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.23□□□□□ -0.61
TMEM116-201ENST00000355445 ZBTB47Q9UFB7 747 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-201ENST00000355445 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
TMEM116-201ENST00000355445 ACSBG1Q96GR2 724 aa11.22□□□□□ -0.61
TMEM116-201ENST00000355445 SGIP1Q9BQI5 828 aa11.21□□□□□ -0.61
TMEM116-201ENST00000355445 FHDC1Q9C0D6 1143 aaPredicted RBP11.21□□□□□ -0.61
TMEM116-201ENST00000355445 NLRP2Q9NX02 1062 aa11.21□□□□□ -0.61
TMEM116-201ENST00000355445 FAM208AQ9UK61 1670 aaKnown RBP11.2□□□□□ -0.62
TMEM116-201ENST00000355445 IL2RBP14784 551 aa11.2□□□□□ -0.62
TMEM116-201ENST00000355445 MTFR1LQ9H019 292 aa11.2□□□□□ -0.62
TMEM116-201ENST00000355445 EDC4Q6P2E9 1401 aaKnown RBP11.2□□□□□ -0.62
TMEM116-201ENST00000355445 ZNF827Q17R98 1081 aa11.19□□□□□ -0.62
TMEM116-201ENST00000355445 ANKRD24Q8TF21 1146 aa11.19□□□□□ -0.62
TMEM116-201ENST00000355445 SYT17Q9BSW7 474 aa11.19□□□□□ -0.62
TMEM116-201ENST00000355445 A0A1W2PP64 1363 aa11.19□□□□□ -0.62
TMEM116-201ENST00000355445 QSER1Q2KHR3 1735 aa11.19□□□□□ -0.62
TMEM116-201ENST00000355445 TMC1Q8TDI8 760 aa11.18□□□□□ -0.62
TMEM116-201ENST00000355445 PCGF6Q9BYE7 350 aa11.18□□□□□ -0.62
TMEM116-201ENST00000355445 DOT1LQ8TEK3 1739 aa11.18□□□□□ -0.62
TMEM116-201ENST00000355445 TUBGCP6Q96RT7 1819 aa11.18□□□□□ -0.62
TMEM116-201ENST00000355445 SHANK3Q9BYB0 1731 aa11.18□□□□□ -0.62
TMEM116-201ENST00000355445 C19orf67A6NJJ6 358 aa11.18□□□□□ -0.62
TMEM116-201ENST00000355445 ZNF784Q8NCA9 323 aaPredicted RBP11.18□□□□□ -0.62
TMEM116-201ENST00000355445 SLC12A5Q9H2X9 1139 aa11.18□□□□□ -0.62
TMEM116-201ENST00000355445 UTRNP46939 3433 aa11.17□□□□□ -0.62
TMEM116-201ENST00000355445 COL24A1Q17RW2 1714 aa11.17□□□□□ -0.62
TMEM116-201ENST00000355445 MAP3K5Q99683 1374 aa11.17□□□□□ -0.62
TMEM116-201ENST00000355445 HDGFL2Q7Z4V5 671 aaPredicted RBP11.17□□□□□ -0.62
TMEM116-201ENST00000355445 CARD11Q9BXL7 1154 aa11.17□□□□□ -0.62
TMEM116-201ENST00000355445 LRRC4BQ9NT99 713 aa11.17□□□□□ -0.62
TMEM116-201ENST00000355445 TRIM26Q12899 539 aaPredicted RBP11.16□□□□□ -0.62
TMEM116-201ENST00000355445 ARXQ96QS3 562 aa11.16□□□□□ -0.62
TMEM116-201ENST00000355445 CHD4Q14839 1912 aa11.15□□□□□ -0.62
TMEM116-201ENST00000355445 LY75O60449 1722 aa11.15□□□□□ -0.62
TMEM116-201ENST00000355445 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
TMEM116-201ENST00000355445 RGPD2P0DJD1 1756 aa11.14□□□□□ -0.63
TMEM116-201ENST00000355445 LTV1Q96GA3 475 aaPredicted RBP11.14□□□□□ -0.63
TMEM116-201ENST00000355445 TERF2IPQ9NYB0 399 aa11.14□□□□□ -0.63
TMEM116-201ENST00000355445 MEGF6O75095 1541 aa11.14□□□□□ -0.63
TMEM116-201ENST00000355445 NSD2O96028 1365 aa11.13□□□□□ -0.63
TMEM116-201ENST00000355445 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
TMEM116-201ENST00000355445 DDX54Q8TDD1 881 aaKnown RBP11.13□□□□□ -0.63
TMEM116-201ENST00000355445 IP6K1Q92551 441 aa11.13□□□□□ -0.63
TMEM116-201ENST00000355445 ANKRD36BQ8N2N9 1353 aa11.13□□□□□ -0.63
TMEM116-201ENST00000355445 MAP3K19Q56UN5 1328 aa11.12□□□□□ -0.63
TMEM116-201ENST00000355445 PNPLA7Q6ZV29 1317 aa11.12□□□□□ -0.63
TMEM116-201ENST00000355445 KCNQ4P56696 695 aa11.12□□□□□ -0.63
TMEM116-201ENST00000355445 SP7Q8TDD2 431 aaPredicted RBP11.12□□□□□ -0.63
TMEM116-201ENST00000355445 MNX1P50219 401 aaPredicted RBP11.11□□□□□ -0.63
TMEM116-201ENST00000355445 SLC27A3Q5K4L6 730 aa11.11□□□□□ -0.63
TMEM116-201ENST00000355445 TONSLQ96HA7 1378 aa11.11□□□□□ -0.63
TMEM116-201ENST00000355445 FBLN1P23142 703 aa11.1□□□□□ -0.63
TMEM116-201ENST00000355445 HOXC9P31274 260 aa11.1□□□□□ -0.63
TMEM116-201ENST00000355445 KLHL34Q8N239 644 aa11.1□□□□□ -0.63
TMEM116-201ENST00000355445 SYTL4Q96C24 671 aaPredicted RBP11.1□□□□□ -0.63
TMEM116-201ENST00000355445 PUS7Q96PZ0 661 aaKnown RBP11.1□□□□□ -0.63
TMEM116-201ENST00000355445 TESK2Q96S53 571 aa11.1□□□□□ -0.63
TMEM116-201ENST00000355445 PRIM1P49642 420 aaKnown RBP11.09□□□□□ -0.63
TMEM116-201ENST00000355445 SLC16A10Q8TF71 515 aa11.09□□□□□ -0.63
TMEM116-201ENST00000355445 KAT6BQ8WYB5 2073 aa11.09□□□□□ -0.63
TMEM116-201ENST00000355445 GOLGB1Q14789 3259 aaKnown RBP11.09□□□□□ -0.63
TMEM116-201ENST00000355445 POLD1P28340 1107 aa11.09□□□□□ -0.63
TMEM116-201ENST00000355445 GPR162Q16538 588 aa11.09□□□□□ -0.63
TMEM116-201ENST00000355445 COG3Q96JB2 828 aa11.09□□□□□ -0.63
TMEM116-201ENST00000355445 TFCP2L1Q9NZI6 479 aa11.09□□□□□ -0.63
TMEM116-201ENST00000355445 RTL1A6NKG5 1358 aa11.08□□□□□ -0.64
TMEM116-201ENST00000355445 C5P01031 1676 aa11.08□□□□□ -0.64
TMEM116-201ENST00000355445 AMPHP49418 695 aa11.08□□□□□ -0.64
TMEM116-201ENST00000355445 NLGN2Q8NFZ4 835 aa11.08□□□□□ -0.64
TMEM116-201ENST00000355445 KIF20BQ96Q89 1820 aa11.07□□□□□ -0.64
TMEM116-201ENST00000355445 SENP3-EIF4A1A0A087X0R7 540 aa11.07□□□□□ -0.64
TMEM116-201ENST00000355445 ST20-MTHFSA0A0A6YYL1 179 aa11.07□□□□□ -0.64
TMEM116-201ENST00000355445 C1QTNF8P60827 252 aa11.07□□□□□ -0.64
TMEM116-201ENST00000355445 PELP1Q8IZL8 1130 aaKnown RBP11.07□□□□□ -0.64
TMEM116-201ENST00000355445 ZCRB1Q8TBF4 217 aaKnown RBP11.07□□□□□ -0.64
TMEM116-201ENST00000355445 CCNL1Q9UK58 526 aaPredicted RBP11.07□□□□□ -0.64
TMEM116-201ENST00000355445 TOGARAM1Q9Y4F4 1720 aa11.06□□□□□ -0.64
TMEM116-201ENST00000355445 RRS1Q15050 365 aaKnown RBP11.06□□□□□ -0.64
TMEM116-201ENST00000355445 NBPF6Q5VWK0 638 aa11.06□□□□□ -0.64
TMEM116-201ENST00000355445 USHBP1Q8N6Y0 703 aa11.06□□□□□ -0.64
TMEM116-201ENST00000355445 NBPF4Q96M43 638 aa11.06□□□□□ -0.64
TMEM116-201ENST00000355445 USP47Q96K76 1375 aa11.05□□□□□ -0.64
TMEM116-201ENST00000355445 CLCN6P51797 869 aa11.05□□□□□ -0.64
TMEM116-201ENST00000355445 SMG6Q86US8 1419 aaKnown RBP11.05□□□□□ -0.64
TMEM116-201ENST00000355445 TAF1LQ8IZX4 1826 aa11.05□□□□□ -0.64
TMEM116-201ENST00000355445 COL23A1Q86Y22 540 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-201ENST00000355445 GGNBP2Q9H3C7 697 aa11.04□□□□□ -0.64
TMEM116-201ENST00000355445 PKD1L3Q7Z443 1732 aa11.04□□□□□ -0.64
TMEM116-201ENST00000355445 YBX3P16989 372 aaKnown RBP eCLIP11.03□□□□□ -0.646e-6■□□□□ 10.9
TMEM116-201ENST00000355445 MSL1Q68DK7 614 aa11.03□□□□□ -0.64
TMEM116-201ENST00000355445 CGNL1Q0VF96 1302 aa11.03□□□□□ -0.64
TMEM116-201ENST00000355445 C4BP0C0L5 1744 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms