RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 ANP32BQ92688 251 aaKnown RBP13.6□□□□□ -0.23
SND1-201ENST00000354725 HDAC5Q9UQL6 1122 aa13.6□□□□□ -0.23
SND1-201ENST00000354725 FAM177A1Q8N128 213 aaPredicted RBP13.6□□□□□ -0.23
SND1-201ENST00000354725 FBXO41Q8TF61 875 aa13.6□□□□□ -0.23
SND1-201ENST00000354725 MINK1Q8N4C8 1332 aaPredicted RBP13.6□□□□□ -0.23
SND1-201ENST00000354725 CDK19Q9BWU1 502 aa13.6□□□□□ -0.23
SND1-201ENST00000354725 PHRF1Q9P1Y6 1649 aaKnown RBP13.59□□□□□ -0.23
SND1-201ENST00000354725 COL3A1P02461 1466 aaPredicted RBP13.59□□□□□ -0.23
SND1-201ENST00000354725 POGKQ9P215 609 aa13.59□□□□□ -0.23
SND1-201ENST00000354725 FOXD4L6Q3SYB3 417 aaPredicted RBP13.59□□□□□ -0.23
SND1-201ENST00000354725 FOXD4L3Q6VB84 417 aaPredicted RBP13.59□□□□□ -0.23
SND1-201ENST00000354725 PLEKHG3A1L390 1219 aa13.58□□□□□ -0.24
SND1-201ENST00000354725 KIF20BQ96Q89 1820 aa13.58□□□□□ -0.24
SND1-201ENST00000354725 APAF1O14727 1248 aa13.57□□□□□ -0.24
SND1-201ENST00000354725 SLC4A3P48751 1232 aa13.57□□□□□ -0.24
SND1-201ENST00000354725 SAFB2Q14151 953 aaKnown RBP eCLIP13.57□□□□□ -0.242e-7■■□□□ 12.7
SND1-201ENST00000354725 CCDC27Q2M243 656 aa13.57□□□□□ -0.24
SND1-201ENST00000354725 MTMR7Q9Y216 660 aa13.57□□□□□ -0.24
SND1-201ENST00000354725 ORAI2Q96SN7 254 aa13.57□□□□□ -0.24
SND1-201ENST00000354725 SOS2Q07890 1332 aaPredicted RBP13.57□□□□□ -0.24
SND1-201ENST00000354725 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
SND1-201ENST00000354725 PPIP5K1Q6PFW1 1433 aa13.57□□□□□ -0.24
SND1-201ENST00000354725 ESPNB1AK53 854 aa13.56□□□□□ -0.24
SND1-201ENST00000354725 TOM1O60784 492 aa13.56□□□□□ -0.24
SND1-201ENST00000354725 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
SND1-201ENST00000354725 BCAR3O75815 825 aa13.56□□□□□ -0.24
SND1-201ENST00000354725 IGHDP01880 384 aa13.56□□□□□ -0.24
SND1-201ENST00000354725 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
SND1-201ENST00000354725 TNNT2P45379 298 aaPredicted RBP13.56□□□□□ -0.24
SND1-201ENST00000354725 KIAA1211Q6ZU35 1233 aa13.56□□□□□ -0.24
SND1-201ENST00000354725 EVC2Q86UK5 1308 aa13.55□□□□□ -0.24
SND1-201ENST00000354725 ATF3P18847 181 aa13.55□□□□□ -0.24
SND1-201ENST00000354725 RIPK4P57078 832 aa13.55□□□□□ -0.24
SND1-201ENST00000354725 KCTD17Q8N5Z5 321 aa13.55□□□□□ -0.24
SND1-201ENST00000354725 NUDT16Q96DE0 195 aaKnown RBP13.55□□□□□ -0.24
SND1-201ENST00000354725 NSD2O96028 1365 aa13.55□□□□□ -0.24
SND1-201ENST00000354725 UBAP1LF5GYI3 381 aa13.55□□□□□ -0.24
SND1-201ENST00000354725 IRX3P78415 501 aaPredicted RBP13.55□□□□□ -0.24
SND1-201ENST00000354725 KIF20AO95235 890 aa13.54□□□□□ -0.24
SND1-201ENST00000354725 CCDC146Q8IYE0 955 aa13.54□□□□□ -0.24
SND1-201ENST00000354725 ATAD2Q6PL18 1390 aa13.54□□□□□ -0.24
SND1-201ENST00000354725 ZSCAN20P17040 1043 aaPredicted RBP13.54□□□□□ -0.24
SND1-201ENST00000354725 CABP2Q9NPB3 220 aa13.54□□□□□ -0.24
SND1-201ENST00000354725 C1orf115Q9H7X2 142 aa13.53□□□□□ -0.24
SND1-201ENST00000354725 SLIT3O75094 1523 aa13.53□□□□□ -0.24
SND1-201ENST00000354725 USP6P35125 1406 aa13.53□□□□□ -0.24
SND1-201ENST00000354725 SBNO1A3KN83 1393 aa13.53□□□□□ -0.24
SND1-201ENST00000354725 FAM13BQ9NYF5 915 aa13.52□□□□□ -0.25
SND1-201ENST00000354725 MAPK8IP3Q9UPT6 1336 aa13.52□□□□□ -0.25
SND1-201ENST00000354725 KAT6BQ8WYB5 2073 aa13.51□□□□□ -0.25
SND1-201ENST00000354725 AEBP1Q8IUX7 1158 aa13.51□□□□□ -0.25
SND1-201ENST00000354725 WDR63Q8IWG1 891 aa13.51□□□□□ -0.25
SND1-201ENST00000354725 CLUAP1Q96AJ1 413 aa13.51□□□□□ -0.25
SND1-201ENST00000354725 COL18A1P39060 1754 aa13.51□□□□□ -0.25
SND1-201ENST00000354725 ERBB4Q15303 1308 aa13.51□□□□□ -0.25
SND1-201ENST00000354725 CCDC61Q9Y6R9 512 aa13.51□□□□□ -0.25
SND1-201ENST00000354725 RARSP54136 660 aaKnown RBP13.5□□□□□ -0.25
SND1-201ENST00000354725 PANK2Q9BZ23 570 aa13.5□□□□□ -0.25
SND1-201ENST00000354725 ANKRD36BQ8N2N9 1353 aa13.5□□□□□ -0.25
SND1-201ENST00000354725 GRIPAP1Q4V328 841 aa13.5□□□□□ -0.25
SND1-201ENST00000354725 A0A1W2PP64 1363 aa13.49□□□□□ -0.25
SND1-201ENST00000354725 TNS3Q68CZ2 1445 aa13.49□□□□□ -0.25
SND1-201ENST00000354725 MTERF4Q7Z6M4 381 aaKnown RBP13.49□□□□□ -0.25
SND1-201ENST00000354725 DDX17Q92841 729 aaKnown RBP13.49□□□□□ -0.25
SND1-201ENST00000354725 PHF8Q9UPP1 1060 aa13.49□□□□□ -0.25
SND1-201ENST00000354725 LRP6O75581 1613 aa13.49□□□□□ -0.25
SND1-201ENST00000354725 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
SND1-201ENST00000354725 LMO7Q8WWI1 1683 aa13.49□□□□□ -0.25
SND1-201ENST00000354725 NFAT5O94916 1531 aa13.49□□□□□ -0.25
SND1-201ENST00000354725 GOLGA6L3A6NEY3 463 aa13.48□□□□□ -0.25
SND1-201ENST00000354725 TERF1P54274 439 aa13.48□□□□□ -0.25
SND1-201ENST00000354725 DNTTIP2Q5QJE6 756 aaKnown RBP13.48□□□□□ -0.25
SND1-201ENST00000354725 ANTXR1Q9H6X2 564 aa13.48□□□□□ -0.25
SND1-201ENST00000354725 NRAPQ86VF7 1730 aa13.48□□□□□ -0.25
SND1-201ENST00000354725 ACEP12821 1306 aa13.48□□□□□ -0.25
SND1-201ENST00000354725 PNPLA6Q8IY17 1366 aa13.48□□□□□ -0.25
SND1-201ENST00000354725 FSD2A1L4K1 749 aa13.48□□□□□ -0.25
SND1-201ENST00000354725 HSPA1LP34931 641 aa13.48□□□□□ -0.25
SND1-201ENST00000354725 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
SND1-201ENST00000354725 GTPBP4Q9BZE4 634 aaKnown RBP13.47□□□□□ -0.25
SND1-201ENST00000354725 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.47□□□□□ -0.25
SND1-201ENST00000354725 CLGNO14967 610 aa13.47□□□□□ -0.25
SND1-201ENST00000354725 CABP1Q9NZU7 370 aa13.47□□□□□ -0.25
SND1-201ENST00000354725 PLCH1Q4KWH8 1693 aa13.47□□□□□ -0.25
SND1-201ENST00000354725 LETM1O95202 739 aaPredicted RBP13.47□□□□□ -0.25
SND1-201ENST00000354725 EDC4Q6P2E9 1401 aaKnown RBP13.46□□□□□ -0.25
SND1-201ENST00000354725 SPATA31A3Q5VYP0 1347 aa13.46□□□□□ -0.25
SND1-201ENST00000354725 SEC24BO95487 1268 aa13.46□□□□□ -0.25
SND1-201ENST00000354725 TAF3Q5VWG9 929 aa13.46□□□□□ -0.26
SND1-201ENST00000354725 ILDR1Q86SU0 546 aaPredicted RBP13.46□□□□□ -0.26
SND1-201ENST00000354725 LTN1O94822 1766 aa13.45□□□□□ -0.26
SND1-201ENST00000354725 OVOS2A0A0J9YW53 1432 aa13.45□□□□□ -0.26
SND1-201ENST00000354725 OVOS2Q6IE36 1432 aa13.45□□□□□ -0.26
SND1-201ENST00000354725 USP31Q70CQ4 1352 aa13.45□□□□□ -0.26
SND1-201ENST00000354725 NPHP3Q7Z494 1330 aa13.45□□□□□ -0.26
SND1-201ENST00000354725 NUTM2FA1L443 756 aa13.45□□□□□ -0.26
SND1-201ENST00000354725 RLBP1P12271 317 aa13.45□□□□□ -0.26
SND1-201ENST00000354725 MMP14P50281 582 aa13.45□□□□□ -0.26
SND1-201ENST00000354725 PIP4K2BP78356 416 aa13.45□□□□□ -0.26
SND1-201ENST00000354725 NWD2Q9ULI1 1742 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms