RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 KIAA1211Q6ZU35 1233 aa14.01□□□□□ -0.17
CAPN9-202ENST00000354537 SDSP20132 328 aa14.01□□□□□ -0.17
CAPN9-202ENST00000354537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.01□□□□□ -0.17
CAPN9-202ENST00000354537 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
CAPN9-202ENST00000354537 DLG5Q8TDM6 1919 aa14□□□□□ -0.17
CAPN9-202ENST00000354537 ELL2O00472 640 aaPredicted RBP14□□□□□ -0.17
CAPN9-202ENST00000354537 ERC2O15083 957 aa14□□□□□ -0.17
CAPN9-202ENST00000354537 MBD3O95983 291 aa14□□□□□ -0.17
CAPN9-202ENST00000354537 CAVIN1Q6NZI2 390 aaKnown RBP14□□□□□ -0.17
CAPN9-202ENST00000354537 SIRT1Q96EB6 747 aa14□□□□□ -0.17
CAPN9-202ENST00000354537 MAP7D2Q96T17 732 aa14□□□□□ -0.17
CAPN9-202ENST00000354537 PPP6R1Q9UPN7 881 aa14□□□□□ -0.17
CAPN9-202ENST00000354537 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
CAPN9-202ENST00000354537 RTL1A6NKG5 1358 aa14□□□□□ -0.17
CAPN9-202ENST00000354537 CHL1O00533 1208 aa13.99□□□□□ -0.17
CAPN9-202ENST00000354537 HMMRO75330 724 aa13.99□□□□□ -0.17
CAPN9-202ENST00000354537 CSPP1Q1MSJ5 1256 aa13.99□□□□□ -0.17
CAPN9-202ENST00000354537 LRSAM1Q6UWE0 723 aa13.99□□□□□ -0.17
CAPN9-202ENST00000354537 NRKQ7Z2Y5 1582 aa13.99□□□□□ -0.17
CAPN9-202ENST00000354537 RAPGEF3O95398 923 aa13.99□□□□□ -0.17
CAPN9-202ENST00000354537 IL17RAQ96F46 866 aa13.99□□□□□ -0.17
CAPN9-202ENST00000354537 RBSNQ9H1K0 784 aa13.99□□□□□ -0.17
CAPN9-202ENST00000354537 C16orf71Q8IYS4 520 aaPredicted RBP13.98□□□□□ -0.17
CAPN9-202ENST00000354537 COG3Q96JB2 828 aa13.98□□□□□ -0.17
CAPN9-202ENST00000354537 ZDHHC9Q9Y397 364 aa13.98□□□□□ -0.17
CAPN9-202ENST00000354537 SETD1AO15047 1707 aaKnown RBP13.97□□□□□ -0.17
CAPN9-202ENST00000354537 MON2Q7Z3U7 1717 aa13.97□□□□□ -0.17
CAPN9-202ENST00000354537 RIMBP3CA6NJZ7 1639 aa13.97□□□□□ -0.17
CAPN9-202ENST00000354537 RIMBP3BA6NNM3 1639 aa13.97□□□□□ -0.17
CAPN9-202ENST00000354537 RIMBP3Q9UFD9 1639 aa13.97□□□□□ -0.17
CAPN9-202ENST00000354537 WASLO00401 505 aaPredicted RBP13.97□□□□□ -0.17
CAPN9-202ENST00000354537 EPB41L2O43491 1005 aaKnown RBP13.97□□□□□ -0.17
CAPN9-202ENST00000354537 PRPF40AO75400 957 aaKnown RBP13.97□□□□□ -0.17
CAPN9-202ENST00000354537 NCLP19338 710 aaKnown RBP13.97□□□□□ -0.17
CAPN9-202ENST00000354537 ANAPC15P60006 121 aa13.97□□□□□ -0.17
CAPN9-202ENST00000354537 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
CAPN9-202ENST00000354537 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
CAPN9-202ENST00000354537 GPT2Q8TD30 523 aa13.97□□□□□ -0.17
CAPN9-202ENST00000354537 INTS4Q96HW7 963 aaKnown RBP13.97□□□□□ -0.17
CAPN9-202ENST00000354537 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.17
CAPN9-202ENST00000354537 CUL4AQ13619 759 aa13.96□□□□□ -0.17
CAPN9-202ENST00000354537 CCDC39Q9UFE4 941 aa13.96□□□□□ -0.17
CAPN9-202ENST00000354537 ZKSCAN5Q9Y2L8 839 aa13.96□□□□□ -0.18
CAPN9-202ENST00000354537 FBLN1P23142 703 aa13.95□□□□□ -0.18
CAPN9-202ENST00000354537 NME9Q86XW9 330 aa13.95□□□□□ -0.18
CAPN9-202ENST00000354537 SSH2Q76I76 1423 aa13.94□□□□□ -0.18
CAPN9-202ENST00000354537 A2ML1A8K2U0 1454 aa13.94□□□□□ -0.18
CAPN9-202ENST00000354537 C3P01024 1663 aa13.94□□□□□ -0.18
CAPN9-202ENST00000354537 BRD1O95696 1058 aa13.94□□□□□ -0.18
CAPN9-202ENST00000354537 CCT4P50991 539 aaKnown RBP13.94□□□□□ -0.18
CAPN9-202ENST00000354537 PKP1Q13835 747 aa13.94□□□□□ -0.18
CAPN9-202ENST00000354537 MTERF4Q7Z6M4 381 aaKnown RBP13.94□□□□□ -0.18
CAPN9-202ENST00000354537 ZGPATQ8N5A5 531 aaKnown RBP13.94□□□□□ -0.18
CAPN9-202ENST00000354537 MCCP23508 829 aa13.93□□□□□ -0.18
CAPN9-202ENST00000354537 VSIG10Q8N0Z9 540 aa13.93□□□□□ -0.18
CAPN9-202ENST00000354537 OTUD7AQ8TE49 926 aaPredicted RBP13.93□□□□□ -0.18
CAPN9-202ENST00000354537 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.93□□□□□ -0.18
CAPN9-202ENST00000354537 MSH6P52701 1360 aa13.93□□□□□ -0.18
CAPN9-202ENST00000354537 AKAP12Q02952 1782 aa13.93□□□□□ -0.18
CAPN9-202ENST00000354537 FAM83GA6ND36 823 aa13.93□□□□□ -0.18
CAPN9-202ENST00000354537 PDE1AP54750 535 aa13.93□□□□□ -0.18
CAPN9-202ENST00000354537 WAPLQ7Z5K2 1190 aa13.93□□□□□ -0.18
CAPN9-202ENST00000354537 SYAP1Q96A49 352 aaPredicted RBP13.93□□□□□ -0.18
CAPN9-202ENST00000354537 ARHGEF10O15013 1369 aa13.92□□□□□ -0.18
CAPN9-202ENST00000354537 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
CAPN9-202ENST00000354537 CCDC61Q9Y6R9 512 aa13.92□□□□□ -0.18
CAPN9-202ENST00000354537 CPS1P31327 1500 aa13.92□□□□□ -0.18
CAPN9-202ENST00000354537 TECPR2O15040 1411 aa13.92□□□□□ -0.18
CAPN9-202ENST00000354537 TMX3Q96JJ7 454 aa13.92□□□□□ -0.18
CAPN9-202ENST00000354537 TMEM63CQ9P1W3 806 aa13.92□□□□□ -0.18
CAPN9-202ENST00000354537 NUDT16Q96DE0 195 aaKnown RBP13.91□□□□□ -0.18
CAPN9-202ENST00000354537 ZMYND15Q9H091 742 aa13.91□□□□□ -0.18
CAPN9-202ENST00000354537 SPATA31D1Q6ZQQ2 1576 aa13.91□□□□□ -0.18
CAPN9-202ENST00000354537 SALL3Q9BXA9 1300 aa13.91□□□□□ -0.18
CAPN9-202ENST00000354537 MEIS3Q99687 375 aa13.91□□□□□ -0.18
CAPN9-202ENST00000354537 AGLP35573 1532 aa13.91□□□□□ -0.18
CAPN9-202ENST00000354537 CRB1P82279 1406 aa13.91□□□□□ -0.18
CAPN9-202ENST00000354537 SMARCA5O60264 1052 aaPredicted RBP13.9□□□□□ -0.18
CAPN9-202ENST00000354537 PHF14O94880 888 aa13.9□□□□□ -0.18
CAPN9-202ENST00000354537 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.9□□□□□ -0.18
CAPN9-202ENST00000354537 PKNOX2Q96KN3 472 aa13.9□□□□□ -0.18
CAPN9-202ENST00000354537 AK9Q5TCS8 1911 aa13.9□□□□□ -0.18
CAPN9-202ENST00000354537 DYNC1I1O14576 645 aa13.9□□□□□ -0.18
CAPN9-202ENST00000354537 NEK4P51957 841 aa13.9□□□□□ -0.18
CAPN9-202ENST00000354537 DCTN1Q14203 1278 aa13.9□□□□□ -0.18
CAPN9-202ENST00000354537 UVSSAQ2YD98 709 aa13.9□□□□□ -0.18
CAPN9-202ENST00000354537 FBXO31Q5XUX0 539 aaPredicted RBP13.9□□□□□ -0.18
CAPN9-202ENST00000354537 ESYT1Q9BSJ8 1104 aa13.9□□□□□ -0.18
CAPN9-202ENST00000354537 SRCIN1Q9C0H9 1055 aa13.9□□□□□ -0.18
CAPN9-202ENST00000354537 AOX1Q06278 1338 aa13.89□□□□□ -0.19
CAPN9-202ENST00000354537 FAM184AQ8NB25 1140 aa13.89□□□□□ -0.19
CAPN9-202ENST00000354537 RBM27Q9P2N5 1060 aaKnown RBP13.89□□□□□ -0.19
CAPN9-202ENST00000354537 ITSN1Q15811 1721 aa13.89□□□□□ -0.19
CAPN9-202ENST00000354537 EIF4A2Q14240 407 aaKnown RBP13.89□□□□□ -0.19
CAPN9-202ENST00000354537 STAP2Q9UGK3 403 aa13.89□□□□□ -0.19
CAPN9-202ENST00000354537 RGPD1P0DJD0 1748 aa13.89□□□□□ -0.19
CAPN9-202ENST00000354537 SYCE3A1L190 88 aa13.88□□□□□ -0.19
CAPN9-202ENST00000354537 GNAI2P04899 355 aa13.88□□□□□ -0.19
CAPN9-202ENST00000354537 TSPY26PQ9H489 355 aa13.88□□□□□ -0.19
CAPN9-202ENST00000354537 ZRANB1Q9UGI0 708 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms