RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CRIPAKQ8N1N5 446 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 C7orf43Q8WVR3 580 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 CDCA7Q9BWT1 371 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-202ENST00000354071 FKBPLQ9UIM3 349 aa2.62□□□□□ -1.99
BRCA1-202ENST00000354071 SFI1A8K8P3 1242 aa2.61□□□□□ -1.99
BRCA1-202ENST00000354071 H3BRB1 525 aa2.61□□□□□ -1.99
BRCA1-202ENST00000354071 FAM177A1Q8N128 213 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-202ENST00000354071 TUT1Q9H6E5 874 aaKnown RBP2.61□□□□□ -1.99
BRCA1-202ENST00000354071 FCF1Q9Y324 198 aaKnown RBP2.61□□□□□ -1.99
BRCA1-202ENST00000354071 FAM196BA6NMK8 535 aa2.61□□□□□ -1.99
BRCA1-202ENST00000354071 FMNL1O95466 1100 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-202ENST00000354071 OCLNQ16625 522 aa2.61□□□□□ -1.99
BRCA1-202ENST00000354071 PLPP7Q8NBV4 271 aa2.61□□□□□ -1.99
BRCA1-202ENST00000354071 CEP126Q9P2H0 1117 aa2.61□□□□□ -1.99
BRCA1-202ENST00000354071 RECKO95980 971 aa2.61□□□□□ -1.99
BRCA1-202ENST00000354071 KCNC4Q03721 635 aa2.61□□□□□ -1.99
BRCA1-202ENST00000354071 ELOAQ14241 798 aaKnown RBP2.61□□□□□ -1.99
BRCA1-202ENST00000354071 ZNF511Q8NB15 262 aa2.61□□□□□ -1.99
BRCA1-202ENST00000354071 CCER1Q8TC90 406 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-202ENST00000354071 CCDC85AQ96PX6 553 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-202ENST00000354071 V9GY48 417 aaPredicted RBP2.61□□□□□ -1.99
BRCA1-202ENST00000354071 SMPD1P17405 629 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 CTHP32929 405 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 RPIAP49247 311 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 ANKMY2Q8IV38 441 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 PPP1R1BQ9UD71 204 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-202ENST00000354071 PCDHB9Q9Y5E1 797 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 PATL2C9JE40 543 aaKnown RBP2.6□□□□□ -1.99
BRCA1-202ENST00000354071 THBS1P07996 1170 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 PDE4CQ08493 712 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 FAM200AQ8TCP9 573 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 CARD14Q9BXL6 1004 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 NR1I2O75469 434 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 CCNYL3P0C7X3 344 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 TCF3P15923 654 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 RNF135Q8IUD6 432 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 FOXJ1Q92949 421 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 SETDB2Q96T68 719 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 SLC6A16Q9GZN6 736 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 ZBTB7BO15156 539 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-202ENST00000354071 LILRA1O75019 489 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 SOX11P35716 441 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 TRIM32Q13049 653 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 NAA30Q147X3 362 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-202ENST00000354071 OXLD1Q5BKU9 147 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 CLP1Q92989 425 aaKnown RBP2.6□□□□□ -1.99
BRCA1-202ENST00000354071 PRR14Q9BWN1 585 aa2.6□□□□□ -1.99
BRCA1-202ENST00000354071 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.6□□□□□ -1.99
BRCA1-202ENST00000354071 DNMT3AQ9Y6K1 912 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-202ENST00000354071 KIF13AQ9H1H9 1805 aa2.59□□□□□ -1.99
BRCA1-202ENST00000354071 LORP23490 312 aaPredicted RBP2.59□□□□□ -1.99
BRCA1-202ENST00000354071 ARID4AP29374 1257 aaPredicted RBP2.59□□□□□ -1.99
BRCA1-202ENST00000354071 TSNAXIP1Q2TAA8 658 aa2.59□□□□□ -1.99
BRCA1-202ENST00000354071 FBXO33Q7Z6M2 555 aa2.59□□□□□ -1.99
BRCA1-202ENST00000354071 TSEN2Q8NCE0 465 aaKnown RBP2.59□□□□□ -1.99
BRCA1-202ENST00000354071 ADAM32Q8TC27 787 aa2.59□□□□□ -1.99
BRCA1-202ENST00000354071 ZNF598Q86UK7 904 aaKnown RBP2.59□□□□□ -1.99
BRCA1-202ENST00000354071 SMARCA5O60264 1052 aaPredicted RBP2.59□□□□□ -2
BRCA1-202ENST00000354071 ARHGAP4P98171 946 aa2.59□□□□□ -2
BRCA1-202ENST00000354071 SLFNL1Q499Z3 407 aa2.59□□□□□ -2
BRCA1-202ENST00000354071 LDLRAD1Q5T700 205 aa2.59□□□□□ -2
BRCA1-202ENST00000354071 PLEKHM2Q8IWE5 1019 aa2.59□□□□□ -2
BRCA1-202ENST00000354071 MAGEB6P1A0A0J9YX57 407 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 FKBP5Q13451 457 aaPredicted RBP2.58□□□□□ -2
BRCA1-202ENST00000354071 TPCN2Q8NHX9 752 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 GTF3C2Q8WUA4 911 aaPredicted RBP2.58□□□□□ -2
BRCA1-202ENST00000354071 KCNH8Q96L42 1107 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 NUDT12Q9BQG2 462 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 WNT7AO00755 349 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 SMCPP49901 116 aaPredicted RBP2.58□□□□□ -2
BRCA1-202ENST00000354071 RAB15P59190 212 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 KMT5BQ4FZB7 885 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 LARP1Q6PKG0 1096 aaKnown RBP2.58□□□□□ -2
BRCA1-202ENST00000354071 Q6ZVU0 165 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 MRGPRX2Q96LB1 330 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 MAP4K5Q9Y4K4 846 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 POTECB2RU33 542 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 GIGYF1O75420 1035 aaPredicted RBP2.58□□□□□ -2
BRCA1-202ENST00000354071 MAPK1P28482 360 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 SCTRP47872 440 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 Q3C1V9 767 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 BAP1Q92560 729 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 BACH2Q9BYV9 841 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 CC2D2AQ9P2K1 1620 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 EPHA4P54764 986 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 FAM26DQ5JW98 314 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 DNAAF2Q9NVR5 837 aaKnown RBP2.58□□□□□ -2
BRCA1-202ENST00000354071 DACH1Q9UI36 760 aa2.58□□□□□ -2
BRCA1-202ENST00000354071 WNT7BP56706 349 aa2.57□□□□□ -2
BRCA1-202ENST00000354071 ERFEQ4G0M1 354 aa2.57□□□□□ -2
BRCA1-202ENST00000354071 PDXDC2PQ6P474 469 aa2.57□□□□□ -2
BRCA1-202ENST00000354071 CXXC1Q9P0U4 656 aaPredicted RBP2.57□□□□□ -2
BRCA1-202ENST00000354071 GPSM3Q9Y4H4 160 aa2.57□□□□□ -2
BRCA1-202ENST00000354071 GTF2IP78347 998 aa2.57□□□□□ -2
BRCA1-202ENST00000354071 LINC01559Q495D7 138 aa2.57□□□□□ -2
BRCA1-202ENST00000354071 CCDC102BQ68D86 513 aa2.57□□□□□ -2
BRCA1-202ENST00000354071 NFATC2IPQ8NCF5 419 aa2.57□□□□□ -2
BRCA1-202ENST00000354071 KLRG1Q96E93 195 aa2.57□□□□□ -2
BRCA1-202ENST00000354071 SIRT1Q96EB6 747 aa2.57□□□□□ -2
BRCA1-202ENST00000354071 SAP130Q9H0E3 1048 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms