RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 MIA2Q96PC5 1412 aa11.78□□□□□ -0.52
COL11A1-201ENST00000353414 ZBTB9Q96C00 473 aa11.77□□□□□ -0.52
COL11A1-201ENST00000353414 TNMDQ9H2S6 317 aa11.77□□□□□ -0.52
COL11A1-201ENST00000353414 SPTY2D1Q68D10 685 aaPredicted RBP11.77□□□□□ -0.52
COL11A1-201ENST00000353414 GAS2L2Q8NHY3 880 aa11.77□□□□□ -0.52
COL11A1-201ENST00000353414 SPG7Q9UQ90 795 aa11.77□□□□□ -0.52
COL11A1-201ENST00000353414 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.77□□□□□ -0.53
COL11A1-201ENST00000353414 KIAA1328Q86T90 577 aa11.77□□□□□ -0.53
COL11A1-201ENST00000353414 TMOD2Q9NZR1 351 aa11.77□□□□□ -0.53
COL11A1-201ENST00000353414 CABP1Q9NZU7 370 aa11.77□□□□□ -0.53
COL11A1-201ENST00000353414 UBAP1LF5GYI3 381 aa11.77□□□□□ -0.53
COL11A1-201ENST00000353414 IGHMBP2P38935 993 aaKnown RBP11.77□□□□□ -0.53
COL11A1-201ENST00000353414 METTL24Q5JXM2 366 aa11.77□□□□□ -0.53
COL11A1-201ENST00000353414 MKNK2Q9HBH9 465 aa11.77□□□□□ -0.53
COL11A1-201ENST00000353414 ZNF622Q969S3 477 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL11A1-201ENST00000353414 PKNOX2Q96KN3 472 aa11.76□□□□□ -0.53
COL11A1-201ENST00000353414 BCCIPQ9P287 314 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL11A1-201ENST00000353414 CLEC11AQ9Y240 323 aa11.76□□□□□ -0.53
COL11A1-201ENST00000353414 PRG4Q92954 1404 aaPredicted RBP11.76□□□□□ -0.53
COL11A1-201ENST00000353414 GOLGA6L10A0A0M3HER8 536 aa11.76□□□□□ -0.53
COL11A1-201ENST00000353414 CCDC112Q8NEF3 446 aa11.76□□□□□ -0.53
COL11A1-201ENST00000353414 ANKRD18AQ8IVF6 992 aa11.76□□□□□ -0.53
COL11A1-201ENST00000353414 CYP46A1Q9Y6A2 500 aa11.76□□□□□ -0.53
COL11A1-201ENST00000353414 ZNF354CQ86Y25 554 aa11.76□□□□□ -0.53
COL11A1-201ENST00000353414 CCDC39Q9UFE4 941 aa11.76□□□□□ -0.53
COL11A1-201ENST00000353414 CWC15Q9P013 229 aaKnown RBP11.75□□□□□ -0.53
COL11A1-201ENST00000353414 ERICH4A6NGS2 130 aa11.75□□□□□ -0.53
COL11A1-201ENST00000353414 GPTP24298 496 aa11.75□□□□□ -0.53
COL11A1-201ENST00000353414 JARID2Q92833 1246 aaPredicted RBP11.75□□□□□ -0.53
COL11A1-201ENST00000353414 JAKMIP1Q96N16 626 aaKnown RBP11.75□□□□□ -0.53
COL11A1-201ENST00000353414 PDZRN3Q9UPQ7 1066 aa11.75□□□□□ -0.53
COL11A1-201ENST00000353414 TCP11L2Q8N4U5 519 aa11.75□□□□□ -0.53
COL11A1-201ENST00000353414 AFAP1Q8N556 730 aa11.75□□□□□ -0.53
COL11A1-201ENST00000353414 LRRCC1Q9C099 1032 aa11.75□□□□□ -0.53
COL11A1-201ENST00000353414 SMARCA5O60264 1052 aaPredicted RBP11.75□□□□□ -0.53
COL11A1-201ENST00000353414 EIF5P55010 431 aaKnown RBP11.75□□□□□ -0.53
COL11A1-201ENST00000353414 CEP57L1Q8IYX8 460 aa11.75□□□□□ -0.53
COL11A1-201ENST00000353414 PUF60Q9UHX1 559 aaKnown RBP11.75□□□□□ -0.53
COL11A1-201ENST00000353414 CNTLNQ9NXG0 1405 aa11.75□□□□□ -0.53
COL11A1-201ENST00000353414 UBE4AQ14139 1066 aa11.74□□□□□ -0.53
COL11A1-201ENST00000353414 RAB11FIP4Q86YS3 637 aa11.74□□□□□ -0.53
COL11A1-201ENST00000353414 SEC63Q9UGP8 760 aaKnown RBP11.74□□□□□ -0.53
COL11A1-201ENST00000353414 SRGAP3O43295 1099 aa11.74□□□□□ -0.53
COL11A1-201ENST00000353414 DZIP1Q86YF9 867 aaKnown RBP11.74□□□□□ -0.53
COL11A1-201ENST00000353414 RAPGEF3O95398 923 aa11.74□□□□□ -0.53
COL11A1-201ENST00000353414 LARP1BQ659C4 914 aaKnown RBP11.74□□□□□ -0.53
COL11A1-201ENST00000353414 ERCC4Q92889 916 aaPredicted RBP11.74□□□□□ -0.53
COL11A1-201ENST00000353414 TRAK2O60296 914 aa11.74□□□□□ -0.53
COL11A1-201ENST00000353414 LEKR1Q6ZMV7 388 aa11.74□□□□□ -0.53
COL11A1-201ENST00000353414 RPGRQ92834 1020 aaKnown RBP11.74□□□□□ -0.53
COL11A1-201ENST00000353414 AIDAQ96BJ3 306 aa11.74□□□□□ -0.53
COL11A1-201ENST00000353414 FGD5Q6ZNL6 1462 aa11.74□□□□□ -0.53
COL11A1-201ENST00000353414 RANBP6O60518 1105 aaKnown RBP11.74□□□□□ -0.53
COL11A1-201ENST00000353414 GNAI3P08754 354 aa11.74□□□□□ -0.53
COL11A1-201ENST00000353414 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL11A1-201ENST00000353414 SLC12A5Q9H2X9 1139 aa11.74□□□□□ -0.53
COL11A1-201ENST00000353414 F8W031 263 aaPredicted RBP11.73□□□□□ -0.53
COL11A1-201ENST00000353414 DESP17661 470 aa11.73□□□□□ -0.53
COL11A1-201ENST00000353414 NGLY1Q96IV0 654 aa11.73□□□□□ -0.53
COL11A1-201ENST00000353414 MYD88Q99836 296 aa11.73□□□□□ -0.53
COL11A1-201ENST00000353414 NOL7Q9UMY1 257 aaKnown RBP11.73□□□□□ -0.53
COL11A1-201ENST00000353414 CCDC178Q5BJE1 867 aa11.73□□□□□ -0.53
COL11A1-201ENST00000353414 BMP2KQ9NSY1 1161 aaPredicted RBP11.73□□□□□ -0.53
COL11A1-201ENST00000353414 C6orf229H3BNL8 230 aa11.73□□□□□ -0.53
COL11A1-201ENST00000353414 ISM2Q6H9L7 571 aa11.72□□□□□ -0.53
COL11A1-201ENST00000353414 USP8P40818 1118 aa11.72□□□□□ -0.53
COL11A1-201ENST00000353414 PPP4R3AQ6IN85 833 aa11.72□□□□□ -0.53
COL11A1-201ENST00000353414 SAMM50Q9Y512 469 aa11.72□□□□□ -0.53
COL11A1-201ENST00000353414 HIP1O00291 1037 aa11.71□□□□□ -0.53
COL11A1-201ENST00000353414 CASTP20810 708 aaKnown RBP11.71□□□□□ -0.53
COL11A1-201ENST00000353414 ANKLE2Q86XL3 938 aa11.71□□□□□ -0.53
COL11A1-201ENST00000353414 PDRG1Q9NUG6 133 aa11.71□□□□□ -0.53
COL11A1-201ENST00000353414 SNAPC4Q5SXM2 1469 aa11.71□□□□□ -0.53
COL11A1-201ENST00000353414 DPH6Q7L8W6 267 aa11.71□□□□□ -0.53
COL11A1-201ENST00000353414 FILIP1Q7Z7B0 1213 aa11.71□□□□□ -0.53
COL11A1-201ENST00000353414 BOLA2Q9H3K6 86 aa11.71□□□□□ -0.53
COL11A1-201ENST00000353414 ZBED9Q6R2W3 1325 aa11.71□□□□□ -0.53
COL11A1-201ENST00000353414 TRIM21P19474 475 aaKnown RBP11.71□□□□□ -0.54
COL11A1-201ENST00000353414 FEZ1Q99689 392 aa11.71□□□□□ -0.54
COL11A1-201ENST00000353414 THUMPD2Q9BTF0 503 aaKnown RBP11.71□□□□□ -0.54
COL11A1-201ENST00000353414 TMOD3Q9NYL9 352 aa11.71□□□□□ -0.54
COL11A1-201ENST00000353414 NF2P35240 595 aa11.71□□□□□ -0.54
COL11A1-201ENST00000353414 TNIP1Q15025 636 aa11.71□□□□□ -0.54
COL11A1-201ENST00000353414 POGZQ7Z3K3 1410 aa11.71□□□□□ -0.54
COL11A1-201ENST00000353414 EZRP15311 586 aaKnown RBP11.71□□□□□ -0.54
COL11A1-201ENST00000353414 MCM10Q7L590 875 aa11.7□□□□□ -0.54
COL11A1-201ENST00000353414 THEMISQ8N1K5 641 aaPredicted RBP11.7□□□□□ -0.54
COL11A1-201ENST00000353414 CCDC102AQ96A19 550 aa11.7□□□□□ -0.54
COL11A1-201ENST00000353414 SRRTQ9BXP5 876 aaKnown RBP11.7□□□□□ -0.54
COL11A1-201ENST00000353414 RBM26Q5T8P6 1007 aaKnown RBP11.7□□□□□ -0.54
COL11A1-201ENST00000353414 ACSBG1Q96GR2 724 aa11.7□□□□□ -0.54
COL11A1-201ENST00000353414 TICAM2Q86XR7 235 aa11.7□□□□□ -0.54
COL11A1-201ENST00000353414 FERMT2Q96AC1 680 aa11.7□□□□□ -0.54
COL11A1-201ENST00000353414 SPATA32Q96LK8 384 aa11.7□□□□□ -0.54
COL11A1-201ENST00000353414 CEP126Q9P2H0 1117 aa11.7□□□□□ -0.54
COL11A1-201ENST00000353414 MRPS9P82933 396 aaKnown RBP11.7□□□□□ -0.54
COL11A1-201ENST00000353414 DYDC1Q8WWB3 177 aa11.7□□□□□ -0.54
COL11A1-201ENST00000353414 KIAA0754O94854 1291 aa11.69□□□□□ -0.54
COL11A1-201ENST00000353414 MAP3K9P80192 1104 aa11.69□□□□□ -0.54
COL11A1-201ENST00000353414 CAVIN4Q5BKX8 364 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms