RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 ZBTB7CA1YPR0 619 aa23.68■■□□□ 1.38
TRIM41-202ENST00000351937 TSPYL6Q8N831 410 aa23.68■■□□□ 1.38
TRIM41-202ENST00000351937 TWISTNBQ3B726 338 aaPredicted RBP23.67■■□□□ 1.38
TRIM41-202ENST00000351937 ZNF335Q9H4Z2 1342 aaPredicted RBP23.67■■□□□ 1.38
TRIM41-202ENST00000351937 TRIM27P14373 513 aa23.67■■□□□ 1.38
TRIM41-202ENST00000351937 MVPQ14764 893 aaKnown RBP23.67■■□□□ 1.38
TRIM41-202ENST00000351937 NBPF6Q5VWK0 638 aa23.67■■□□□ 1.38
TRIM41-202ENST00000351937 NBPF4Q96M43 638 aa23.67■■□□□ 1.38
TRIM41-202ENST00000351937 C8orf58Q8NAV2 365 aa23.66■■□□□ 1.38
TRIM41-202ENST00000351937 HAP1P54257 671 aaPredicted RBP23.65■■□□□ 1.38
TRIM41-202ENST00000351937 DDX17Q92841 729 aaKnown RBP23.65■■□□□ 1.38
TRIM41-202ENST00000351937 GNAT3A8MTJ3 354 aa23.65■■□□□ 1.38
TRIM41-202ENST00000351937 MED1Q15648 1581 aaPredicted RBP23.64■■□□□ 1.38
TRIM41-202ENST00000351937 KIAA0232Q92628 1395 aa23.64■■□□□ 1.37
TRIM41-202ENST00000351937 TCERG1O14776 1098 aaKnown RBP23.64■■□□□ 1.37
TRIM41-202ENST00000351937 USHBP1Q8N6Y0 703 aa23.64■■□□□ 1.37
TRIM41-202ENST00000351937 PXDNQ92626 1479 aa23.63■■□□□ 1.37
TRIM41-202ENST00000351937 MRPL50Q8N5N7 158 aaKnown RBP23.63■■□□□ 1.37
TRIM41-202ENST00000351937 TNS3Q68CZ2 1445 aa23.63■■□□□ 1.37
TRIM41-202ENST00000351937 ELL2O00472 640 aaPredicted RBP23.63■■□□□ 1.37
TRIM41-202ENST00000351937 PLEKHG5O94827 1062 aa23.63■■□□□ 1.37
TRIM41-202ENST00000351937 ARHGAP45Q92619 1136 aa23.63■■□□□ 1.37
TRIM41-202ENST00000351937 MSH5O43196 834 aa23.62■■□□□ 1.37
TRIM41-202ENST00000351937 BRINP3Q76B58 766 aa23.62■■□□□ 1.37
TRIM41-202ENST00000351937 MAP3K5Q99683 1374 aa23.61■■□□□ 1.37
TRIM41-202ENST00000351937 ANKRD24Q8TF21 1146 aa23.61■■□□□ 1.37
TRIM41-202ENST00000351937 NCAPD2Q15021 1401 aa23.6■■□□□ 1.37
TRIM41-202ENST00000351937 SPATA31A3Q5VYP0 1347 aa23.6■■□□□ 1.37
TRIM41-202ENST00000351937 SLAIN2Q9P270 581 aa23.6■■□□□ 1.37
TRIM41-202ENST00000351937 DDX19BQ9UMR2 479 aa23.6■■□□□ 1.37
TRIM41-202ENST00000351937 AXIN2Q9Y2T1 843 aa23.59■■□□□ 1.37
TRIM41-202ENST00000351937 LRRC59Q96AG4 307 aaKnown RBP23.59■■□□□ 1.37
TRIM41-202ENST00000351937 LRRC37A3O60309 1634 aa23.58■■□□□ 1.37
TRIM41-202ENST00000351937 ZC3H6P61129 1189 aaKnown RBP23.58■■□□□ 1.37
TRIM41-202ENST00000351937 TSPYL4Q9UJ04 414 aa23.57■■□□□ 1.36
TRIM41-202ENST00000351937 IGHDP01880 384 aa23.56■■□□□ 1.36
TRIM41-202ENST00000351937 BABAM1Q9NWV8 329 aa23.56■■□□□ 1.36
TRIM41-202ENST00000351937 ITPRIPQ8IWB1 547 aa23.56■■□□□ 1.36
TRIM41-202ENST00000351937 TMEM57Q8N5G2 664 aa23.56■■□□□ 1.36
TRIM41-202ENST00000351937 IL17REQ8NFR9 667 aa23.56■■□□□ 1.36
TRIM41-202ENST00000351937 RGPD2P0DJD1 1756 aa23.56■■□□□ 1.36
TRIM41-202ENST00000351937 CAMTA1Q9Y6Y1 1673 aa23.55■■□□□ 1.36
TRIM41-202ENST00000351937 AMOTQ4VCS5 1084 aa23.55■■□□□ 1.36
TRIM41-202ENST00000351937 PCDHB15Q9Y5E8 787 aa23.55■■□□□ 1.36
TRIM41-202ENST00000351937 ERBB3P21860 1342 aa23.54■■□□□ 1.36
TRIM41-202ENST00000351937 PLEKHO1Q53GL0 409 aaPredicted RBP23.54■■□□□ 1.36
TRIM41-202ENST00000351937 MIS18AQ9NYP9 233 aa23.54■■□□□ 1.36
TRIM41-202ENST00000351937 KRT24Q2M2I5 525 aa23.53■■□□□ 1.36
TRIM41-202ENST00000351937 ABCC6O95255 1503 aa23.52■■□□□ 1.36
TRIM41-202ENST00000351937 SOS2Q07890 1332 aaPredicted RBP23.52■■□□□ 1.36
TRIM41-202ENST00000351937 TAF7Q15545 349 aaPredicted RBP23.52■■□□□ 1.36
TRIM41-202ENST00000351937 API5Q9BZZ5 524 aaKnown RBP23.52■■□□□ 1.36
TRIM41-202ENST00000351937 CABLES1Q8TDN4 633 aa23.51■■□□□ 1.35
TRIM41-202ENST00000351937 CEMIPQ8WUJ3 1361 aa23.51■■□□□ 1.35
TRIM41-202ENST00000351937 RWDD1Q9H446 243 aaPredicted RBP23.51■■□□□ 1.35
TRIM41-202ENST00000351937 CRYBG1Q9Y4K1 1723 aa23.51■■□□□ 1.35
TRIM41-202ENST00000351937 AKAP4Q5JQC9 854 aa23.5■■□□□ 1.35
TRIM41-202ENST00000351937 CPDO75976 1380 aa23.5■■□□□ 1.35
TRIM41-202ENST00000351937 CHMP4BQ9H444 224 aaKnown RBP23.5■■□□□ 1.35
TRIM41-202ENST00000351937 RGPD5Q99666 1765 aa23.49■■□□□ 1.35
TRIM41-202ENST00000351937 ZBTB40Q9NUA8 1239 aa23.49■■□□□ 1.35
TRIM41-202ENST00000351937 ABCC4O15439 1325 aa23.49■■□□□ 1.35
TRIM41-202ENST00000351937 COL18A1P39060 1754 aa23.49■■□□□ 1.35
TRIM41-202ENST00000351937 LMO7Q8WWI1 1683 aa23.48■■□□□ 1.35
TRIM41-202ENST00000351937 ZNF530Q6P9A1 599 aaPredicted RBP23.48■■□□□ 1.35
TRIM41-202ENST00000351937 SOS1Q07889 1333 aaPredicted RBP23.48■■□□□ 1.35
TRIM41-202ENST00000351937 SKAP1Q86WV1 359 aa23.47■■□□□ 1.35
TRIM41-202ENST00000351937 C1orf141Q5JVX7 400 aa23.45■■□□□ 1.34
TRIM41-202ENST00000351937 PTPRCP08575 1304 aa23.45■■□□□ 1.34
TRIM41-202ENST00000351937 HDAC1Q13547 482 aaPredicted RBP23.44■■□□□ 1.34
TRIM41-202ENST00000351937 NLRP2Q9NX02 1062 aa23.44■■□□□ 1.34
TRIM41-202ENST00000351937 ZBTB7BO15156 539 aaPredicted RBP23.44■■□□□ 1.34
TRIM41-202ENST00000351937 LGR6Q9HBX8 967 aa23.44■■□□□ 1.34
TRIM41-202ENST00000351937 OVOS2A0A0G2JMS6 1433 aa23.43■■□□□ 1.34
TRIM41-202ENST00000351937 SLC4A2P04920 1241 aa23.42■■□□□ 1.34
TRIM41-202ENST00000351937 PDE4AP27815 886 aa23.42■■□□□ 1.34
TRIM41-202ENST00000351937 CHRNA2Q15822 529 aa23.42■■□□□ 1.34
TRIM41-202ENST00000351937 PLEKHG2Q9H7P9 1386 aa23.42■■□□□ 1.34
TRIM41-202ENST00000351937 FAM208AQ9UK61 1670 aaKnown RBP23.42■■□□□ 1.34
TRIM41-202ENST00000351937 RAPGEF4Q8WZA2 1011 aa23.42■■□□□ 1.34
TRIM41-202ENST00000351937 CSB-PGBD3P0DP91 1061 aa23.41■■□□□ 1.34
TRIM41-202ENST00000351937 TEFQ10587 303 aa23.4■■□□□ 1.34
TRIM41-202ENST00000351937 BACH2Q9BYV9 841 aa23.4■■□□□ 1.34
TRIM41-202ENST00000351937 RNMTO43148 476 aaKnown RBP23.39■■□□□ 1.34
TRIM41-202ENST00000351937 CCDC30Q5VVM6 783 aa23.39■■□□□ 1.34
TRIM41-202ENST00000351937 INTS3Q68E01 1043 aaKnown RBP23.39■■□□□ 1.34
TRIM41-202ENST00000351937 MPRIPQ6WCQ1 1025 aa23.39■■□□□ 1.34
TRIM41-202ENST00000351937 STK31Q9BXU1 1019 aa23.39■■□□□ 1.33
TRIM41-202ENST00000351937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.39■■□□□ 1.33
TRIM41-202ENST00000351937 NHSL1Q5SYE7 1610 aa23.39■■□□□ 1.33
TRIM41-202ENST00000351937 RGS12O14924 1447 aa23.39■■□□□ 1.33
TRIM41-202ENST00000351937 RGS3P49796 1198 aa23.38■■□□□ 1.33
TRIM41-202ENST00000351937 TATP17735 454 aaPredicted RBP23.38■■□□□ 1.33
TRIM41-202ENST00000351937 PRDM11Q9NQV5 511 aa23.36■■□□□ 1.33
TRIM41-202ENST00000351937 SPG7Q9UQ90 795 aa23.36■■□□□ 1.33
TRIM41-202ENST00000351937 BTBD11A6QL63 1104 aa23.35■■□□□ 1.33
TRIM41-202ENST00000351937 EIF4A1P60842 406 aaKnown RBP23.35■■□□□ 1.33
TRIM41-202ENST00000351937 CHMP4AQ9BY43 222 aa23.35■■□□□ 1.33
TRIM41-202ENST00000351937 KDM3BQ7LBC6 1761 aa23.35■■□□□ 1.33
TRIM41-202ENST00000351937 HOXB7P09629 217 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms