RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 DHX29Q7Z478 1369 aaKnown RBP12.47□□□□□ -0.41
SMG7-201ENST00000347615 BTBD11A6QL63 1104 aa12.47□□□□□ -0.41
SMG7-201ENST00000347615 TCEANC2Q96MN5 208 aa12.47□□□□□ -0.41
SMG7-201ENST00000347615 RAB11FIP4Q86YS3 637 aa12.47□□□□□ -0.41
SMG7-201ENST00000347615 CIZ1Q9ULV3 898 aaPredicted RBP12.47□□□□□ -0.41
SMG7-201ENST00000347615 CT47B1P0C2W7 299 aaPredicted RBP12.47□□□□□ -0.41
SMG7-201ENST00000347615 NOS1P29475 1434 aa12.47□□□□□ -0.41
SMG7-201ENST00000347615 KRT85P78386 507 aa12.47□□□□□ -0.41
SMG7-201ENST00000347615 TSPYL6Q8N831 410 aa12.47□□□□□ -0.41
SMG7-201ENST00000347615 STRN4Q9NRL3 753 aa12.46□□□□□ -0.41
SMG7-201ENST00000347615 ZHX1Q9UKY1 873 aaPredicted RBP12.46□□□□□ -0.41
SMG7-201ENST00000347615 ERICH2A1L162 156 aa12.46□□□□□ -0.41
SMG7-201ENST00000347615 ZSCAN23Q3MJ62 389 aa12.46□□□□□ -0.41
SMG7-201ENST00000347615 BLOC1S2Q6QNY1 142 aa12.46□□□□□ -0.41
SMG7-201ENST00000347615 SERPINC1P01008 464 aa12.46□□□□□ -0.42
SMG7-201ENST00000347615 OLFM4Q6UX06 510 aa12.46□□□□□ -0.42
SMG7-201ENST00000347615 NUP62CLQ9H1M0 184 aa12.46□□□□□ -0.42
SMG7-201ENST00000347615 ZNF608Q9ULD9 1512 aaPredicted RBP12.46□□□□□ -0.42
SMG7-201ENST00000347615 LETM1O95202 739 aaPredicted RBP12.45□□□□□ -0.42
SMG7-201ENST00000347615 RPAP2Q8IXW5 612 aaPredicted RBP12.45□□□□□ -0.42
SMG7-201ENST00000347615 TRMT1Q9NXH9 659 aaKnown RBP12.45□□□□□ -0.42
SMG7-201ENST00000347615 MEIS3Q99687 375 aa12.45□□□□□ -0.42
SMG7-201ENST00000347615 TAF7Q15545 349 aaPredicted RBP12.45□□□□□ -0.42
SMG7-201ENST00000347615 ISM2Q6H9L7 571 aa12.45□□□□□ -0.42
SMG7-201ENST00000347615 CARD14Q9BXL6 1004 aa12.45□□□□□ -0.42
SMG7-201ENST00000347615 NAT10Q9H0A0 1025 aaKnown RBP12.45□□□□□ -0.42
SMG7-201ENST00000347615 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
SMG7-201ENST00000347615 ZC3H6P61129 1189 aaKnown RBP12.45□□□□□ -0.42
SMG7-201ENST00000347615 RRP9O43818 475 aaKnown RBP12.45□□□□□ -0.42
SMG7-201ENST00000347615 ZGPATQ8N5A5 531 aaKnown RBP12.45□□□□□ -0.42
SMG7-201ENST00000347615 TRERF1Q96PN7 1200 aa12.45□□□□□ -0.42
SMG7-201ENST00000347615 TTC39AQ5SRH9 613 aa12.44□□□□□ -0.42
SMG7-201ENST00000347615 TEX35Q5T0J7 233 aa12.44□□□□□ -0.42
SMG7-201ENST00000347615 MPRIPQ6WCQ1 1025 aa12.44□□□□□ -0.42
SMG7-201ENST00000347615 C8orf58Q8NAV2 365 aa12.44□□□□□ -0.42
SMG7-201ENST00000347615 CCDC112Q8NEF3 446 aa12.44□□□□□ -0.42
SMG7-201ENST00000347615 RRAGDQ9NQL2 400 aaPredicted RBP12.44□□□□□ -0.42
SMG7-201ENST00000347615 KIAA0586Q9BVV6 1533 aa12.44□□□□□ -0.42
SMG7-201ENST00000347615 C16orf45Q96MC5 204 aaPredicted RBP12.44□□□□□ -0.42
SMG7-201ENST00000347615 SDSP20132 328 aa12.44□□□□□ -0.42
SMG7-201ENST00000347615 GIMAP6Q6P9H5 292 aa12.44□□□□□ -0.42
SMG7-201ENST00000347615 NUCB1Q02818 461 aa12.43□□□□□ -0.42
SMG7-201ENST00000347615 SAFBQ15424 915 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMG7-201ENST00000347615 NECAB1Q8N987 351 aa12.43□□□□□ -0.42
SMG7-201ENST00000347615 TESK2Q96S53 571 aa12.43□□□□□ -0.42
SMG7-201ENST00000347615 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
SMG7-201ENST00000347615 IDI1Q13907 227 aa12.43□□□□□ -0.42
SMG7-201ENST00000347615 URB2Q14146 1524 aaKnown RBP12.43□□□□□ -0.42
SMG7-201ENST00000347615 CCDC82Q8N4S0 544 aa12.43□□□□□ -0.42
SMG7-201ENST00000347615 IFT140Q96RY7 1462 aa12.43□□□□□ -0.42
SMG7-201ENST00000347615 CCT2P78371 535 aaKnown RBP12.43□□□□□ -0.42
SMG7-201ENST00000347615 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
SMG7-201ENST00000347615 NUP133Q8WUM0 1156 aa12.43□□□□□ -0.42
SMG7-201ENST00000347615 PLEKHO1Q53GL0 409 aaPredicted RBP12.43□□□□□ -0.42
SMG7-201ENST00000347615 HCLS1P14317 486 aaPredicted RBP12.42□□□□□ -0.42
SMG7-201ENST00000347615 GNAT3A8MTJ3 354 aa12.42□□□□□ -0.42
SMG7-201ENST00000347615 PDCP20941 246 aa12.42□□□□□ -0.42
SMG7-201ENST00000347615 GPS2Q13227 327 aa12.42□□□□□ -0.42
SMG7-201ENST00000347615 ADCY5O95622 1261 aa12.42□□□□□ -0.42
SMG7-201ENST00000347615 LRRFIP1Q32MZ4 808 aaKnown RBP12.42□□□□□ -0.42
SMG7-201ENST00000347615 ALDH1L2Q3SY69 923 aa12.42□□□□□ -0.42
SMG7-201ENST00000347615 GPATCH8Q9UKJ3 1502 aaKnown RBP12.42□□□□□ -0.42
SMG7-201ENST00000347615 TTC22Q5TAA0 569 aa12.41□□□□□ -0.42
SMG7-201ENST00000347615 ATAD2Q6PL18 1390 aa12.41□□□□□ -0.42
SMG7-201ENST00000347615 ARGLU1Q9NWB6 273 aaPredicted RBP12.41□□□□□ -0.42
SMG7-201ENST00000347615 UGGT2Q9NYU1 1516 aa12.41□□□□□ -0.42
SMG7-201ENST00000347615 PER1O15534 1290 aaPredicted RBP12.41□□□□□ -0.42
SMG7-201ENST00000347615 IPO7O95373 1038 aaKnown RBP12.41□□□□□ -0.42
SMG7-201ENST00000347615 PRIM1P49642 420 aaKnown RBP12.41□□□□□ -0.42
SMG7-201ENST00000347615 BMP2KLQ5H9B9 411 aa12.41□□□□□ -0.42
SMG7-201ENST00000347615 LRRC2Q9BYS8 371 aa12.41□□□□□ -0.42
SMG7-201ENST00000347615 CNNM1Q9NRU3 951 aa12.41□□□□□ -0.42
SMG7-201ENST00000347615 CNPY2Q9Y2B0 182 aa12.41□□□□□ -0.42
SMG7-201ENST00000347615 SCAF11Q99590 1463 aaKnown RBP12.41□□□□□ -0.42
SMG7-201ENST00000347615 BIN1O00499 593 aa12.41□□□□□ -0.42
SMG7-201ENST00000347615 GJB2P29033 226 aa12.41□□□□□ -0.42
SMG7-201ENST00000347615 PDCL2Q8N4E4 241 aa12.41□□□□□ -0.42
SMG7-201ENST00000347615 NCKAP5LQ9HCH0 1330 aa12.41□□□□□ -0.42
SMG7-201ENST00000347615 HMGN5P82970 282 aaKnown RBP12.41□□□□□ -0.42
SMG7-201ENST00000347615 MAP3K11Q16584 847 aa12.41□□□□□ -0.42
SMG7-201ENST00000347615 OTUD7AQ8TE49 926 aaPredicted RBP12.41□□□□□ -0.42
SMG7-201ENST00000347615 HOOK1Q9UJC3 728 aaKnown RBP12.41□□□□□ -0.42
SMG7-201ENST00000347615 PIP4K2AP48426 406 aaPredicted RBP12.4□□□□□ -0.42
SMG7-201ENST00000347615 TMX3Q96JJ7 454 aa12.4□□□□□ -0.42
SMG7-201ENST00000347615 MAP7D2Q96T17 732 aa12.4□□□□□ -0.42
SMG7-201ENST00000347615 CUL7Q14999 1698 aa12.4□□□□□ -0.42
SMG7-201ENST00000347615 KIF14Q15058 1648 aa12.4□□□□□ -0.42
SMG7-201ENST00000347615 CAGE1Q8TC20 777 aa12.4□□□□□ -0.42
SMG7-201ENST00000347615 UNC13AQ9UPW8 1703 aa12.4□□□□□ -0.42
SMG7-201ENST00000347615 RAB11FIP3O75154 756 aa12.4□□□□□ -0.42
SMG7-201ENST00000347615 ZMYND15Q9H091 742 aa12.4□□□□□ -0.42
SMG7-201ENST00000347615 IGSF3O75054 1194 aa12.4□□□□□ -0.42
SMG7-201ENST00000347615 CCDC61Q9Y6R9 512 aa12.39□□□□□ -0.43
SMG7-201ENST00000347615 PTCD1O75127 700 aaKnown RBP12.39□□□□□ -0.43
SMG7-201ENST00000347615 ERC1Q8IUD2 1116 aa12.39□□□□□ -0.43
SMG7-201ENST00000347615 ANKRD20A12PQ8NF67 263 aa12.39□□□□□ -0.43
SMG7-201ENST00000347615 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
SMG7-201ENST00000347615 ZNF396Q96N95 335 aaPredicted RBP12.39□□□□□ -0.43
SMG7-201ENST00000347615 PHACTR3Q96KR7 559 aa12.39□□□□□ -0.43
SMG7-201ENST00000347615 MYD88Q99836 296 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms