RNA–Protein interactions for RNA: ENST00000347458.9

STAU1-202, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-202ENST00000347458 ALDH1L2Q3SY69 923 aa13.27□□□□□ -0.29
STAU1-202ENST00000347458 SYCP2Q9BX26 1530 aa13.27□□□□□ -0.29
STAU1-202ENST00000347458 EFCAB2Q5VUJ9 269 aa13.26□□□□□ -0.29
STAU1-202ENST00000347458 C16orf45Q96MC5 204 aaPredicted RBP13.26□□□□□ -0.29
STAU1-202ENST00000347458 TRERF1Q96PN7 1200 aa13.26□□□□□ -0.29
STAU1-202ENST00000347458 U2SURPO15042 1029 aaKnown RBP13.26□□□□□ -0.29
STAU1-202ENST00000347458 KIF3BO15066 747 aa13.26□□□□□ -0.29
STAU1-202ENST00000347458 TRIM6-TRIM34B2RNG4 842 aa13.26□□□□□ -0.29
STAU1-202ENST00000347458 MX1P20591 662 aa13.26□□□□□ -0.29
STAU1-202ENST00000347458 KRT222Q8N1A0 295 aa13.26□□□□□ -0.29
STAU1-202ENST00000347458 TRIM34Q9BYJ4 488 aa13.26□□□□□ -0.29
STAU1-202ENST00000347458 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
STAU1-202ENST00000347458 ATAD2Q6PL18 1390 aa13.25□□□□□ -0.29
STAU1-202ENST00000347458 TCHHQ07283 1943 aa13.25□□□□□ -0.29
STAU1-202ENST00000347458 PTGS1P23219 599 aa13.25□□□□□ -0.29
STAU1-202ENST00000347458 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
STAU1-202ENST00000347458 ST7Q9NRC1 585 aa13.25□□□□□ -0.29
STAU1-202ENST00000347458 SMTNL1A8MU46 457 aa13.25□□□□□ -0.29
STAU1-202ENST00000347458 CUL4AQ13619 759 aa13.25□□□□□ -0.29
STAU1-202ENST00000347458 SPAG9O60271 1321 aaKnown RBP13.25□□□□□ -0.29
STAU1-202ENST00000347458 TRAPPC8Q9Y2L5 1435 aa13.24□□□□□ -0.29
STAU1-202ENST00000347458 IL16Q14005 1332 aa13.24□□□□□ -0.29
STAU1-202ENST00000347458 GIMAP6Q6P9H5 292 aa13.24□□□□□ -0.29
STAU1-202ENST00000347458 FUCA2Q9BTY2 467 aa13.24□□□□□ -0.29
STAU1-202ENST00000347458 KMT5BQ4FZB7 885 aa13.24□□□□□ -0.29
STAU1-202ENST00000347458 CALCOCO1Q9P1Z2 691 aa13.24□□□□□ -0.29
STAU1-202ENST00000347458 CDC42BPBQ9Y5S2 1711 aa13.23□□□□□ -0.29
STAU1-202ENST00000347458 REC8O95072 547 aa13.23□□□□□ -0.29
STAU1-202ENST00000347458 TPM3P06753 285 aa13.23□□□□□ -0.29
STAU1-202ENST00000347458 CASC1Q6TDU7 716 aa13.23□□□□□ -0.29
STAU1-202ENST00000347458 CNPY2Q9Y2B0 182 aa13.23□□□□□ -0.29
STAU1-202ENST00000347458 LRMPQ12912 555 aa13.23□□□□□ -0.29
STAU1-202ENST00000347458 TNNT1P13805 278 aa13.22□□□□□ -0.29
STAU1-202ENST00000347458 MRPL50Q8N5N7 158 aaKnown RBP13.22□□□□□ -0.29
STAU1-202ENST00000347458 DCTPP1Q9H773 170 aa13.22□□□□□ -0.29
STAU1-202ENST00000347458 ERC2O15083 957 aa13.22□□□□□ -0.29
STAU1-202ENST00000347458 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
STAU1-202ENST00000347458 GGT6Q6P531 493 aa13.22□□□□□ -0.29
STAU1-202ENST00000347458 FAM53CQ9NYF3 392 aa13.22□□□□□ -0.29
STAU1-202ENST00000347458 PIK3R4Q99570 1358 aa13.22□□□□□ -0.29
STAU1-202ENST00000347458 IRX3P78415 501 aaPredicted RBP13.22□□□□□ -0.29
STAU1-202ENST00000347458 SRCIN1Q9C0H9 1055 aa13.22□□□□□ -0.29
STAU1-202ENST00000347458 APBB1O00213 710 aa13.21□□□□□ -0.29
STAU1-202ENST00000347458 BRPF1P55201 1214 aaPredicted RBP13.21□□□□□ -0.29
STAU1-202ENST00000347458 CCDC112Q8NEF3 446 aa13.21□□□□□ -0.29
STAU1-202ENST00000347458 IFT57Q9NWB7 429 aa13.21□□□□□ -0.29
STAU1-202ENST00000347458 ADGRF5Q8IZF2 1346 aa13.21□□□□□ -0.3
STAU1-202ENST00000347458 GOLGA6L6A8MZA4 724 aa13.21□□□□□ -0.3
STAU1-202ENST00000347458 AEBP1Q8IUX7 1158 aa13.21□□□□□ -0.3
STAU1-202ENST00000347458 TMEM87AQ8NBN3 555 aa13.21□□□□□ -0.3
STAU1-202ENST00000347458 ZBTB9Q96C00 473 aa13.21□□□□□ -0.3
STAU1-202ENST00000347458 INTS4Q96HW7 963 aaKnown RBP13.21□□□□□ -0.3
STAU1-202ENST00000347458 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.21□□□□□ -0.3
STAU1-202ENST00000347458 V9GYY5 206 aaPredicted RBP13.21□□□□□ -0.3
STAU1-202ENST00000347458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.2□□□□□ -0.3
STAU1-202ENST00000347458 RBM6P78332 1123 aaKnown RBP13.2□□□□□ -0.3
STAU1-202ENST00000347458 PALD1Q9ULE6 856 aa13.2□□□□□ -0.3
STAU1-202ENST00000347458 KNDC1Q76NI1 1749 aa13.2□□□□□ -0.3
STAU1-202ENST00000347458 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
STAU1-202ENST00000347458 PTCH1Q13635 1447 aa13.2□□□□□ -0.3
STAU1-202ENST00000347458 ABCC4O15439 1325 aa13.2□□□□□ -0.3
STAU1-202ENST00000347458 HNRNPH2P55795 449 aaKnown RBP13.19□□□□□ -0.3
STAU1-202ENST00000347458 CCDC186Q7Z3E2 898 aa13.19□□□□□ -0.3
STAU1-202ENST00000347458 ZNF397Q8NF99 534 aaPredicted RBP13.19□□□□□ -0.3
STAU1-202ENST00000347458 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
STAU1-202ENST00000347458 FEZ2Q9UHY8 353 aaPredicted RBP13.19□□□□□ -0.3
STAU1-202ENST00000347458 RPAP1Q9BWH6 1393 aaPredicted RBP13.19□□□□□ -0.3
STAU1-202ENST00000347458 WDR33Q9C0J8 1336 aaKnown RBP13.19□□□□□ -0.3
STAU1-202ENST00000347458 ELL2O00472 640 aaPredicted RBP13.19□□□□□ -0.3
STAU1-202ENST00000347458 VAMP4O75379 141 aa13.19□□□□□ -0.3
STAU1-202ENST00000347458 MCM2P49736 904 aa13.19□□□□□ -0.3
STAU1-202ENST00000347458 ARHGAP45Q92619 1136 aa13.19□□□□□ -0.3
STAU1-202ENST00000347458 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
STAU1-202ENST00000347458 PAXBP1Q9Y5B6 917 aa13.19□□□□□ -0.3
STAU1-202ENST00000347458 KIAA1210Q9ULL0 1709 aa13.19□□□□□ -0.3
STAU1-202ENST00000347458 TRPM2O94759 1503 aa13.18□□□□□ -0.3
STAU1-202ENST00000347458 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.18□□□□□ -0.3
STAU1-202ENST00000347458 UBE2HP62256 183 aa13.18□□□□□ -0.3
STAU1-202ENST00000347458 ZNF592Q92610 1267 aa13.18□□□□□ -0.3
STAU1-202ENST00000347458 YEATS2Q9ULM3 1422 aa13.18□□□□□ -0.3
STAU1-202ENST00000347458 FBXO38Q6PIJ6 1188 aa13.18□□□□□ -0.3
STAU1-202ENST00000347458 PREX2Q70Z35 1606 aa13.18□□□□□ -0.3
STAU1-202ENST00000347458 ZNF215Q9UL58 517 aaPredicted RBP13.17□□□□□ -0.3
STAU1-202ENST00000347458 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
STAU1-202ENST00000347458 RAPGEF3O95398 923 aa13.17□□□□□ -0.3
STAU1-202ENST00000347458 FIBPO43427 364 aa13.17□□□□□ -0.3
STAU1-202ENST00000347458 CYP2C19P33261 490 aa13.17□□□□□ -0.3
STAU1-202ENST00000347458 RGS22Q8NE09 1264 aa13.17□□□□□ -0.3
STAU1-202ENST00000347458 UPF3BQ9BZI7 483 aaKnown RBP13.17□□□□□ -0.3
STAU1-202ENST00000347458 TPD52L1Q16890 204 aaPredicted RBP13.16□□□□□ -0.3
STAU1-202ENST00000347458 RTF1Q92541 710 aaKnown RBP13.16□□□□□ -0.3
STAU1-202ENST00000347458 ZNF446Q9NWS9 450 aa13.16□□□□□ -0.3
STAU1-202ENST00000347458 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
STAU1-202ENST00000347458 UHRF1BP1LA0JNW5 1464 aa13.16□□□□□ -0.3
STAU1-202ENST00000347458 SBNO2Q9Y2G9 1366 aa13.16□□□□□ -0.3
STAU1-202ENST00000347458 RAD51AP2Q09MP3 1159 aa13.16□□□□□ -0.3
STAU1-202ENST00000347458 CYB5RLQ6IPT4 315 aa13.16□□□□□ -0.3
STAU1-202ENST00000347458 SRPK2P78362 688 aaKnown RBP13.15□□□□□ -0.3
STAU1-202ENST00000347458 ZSCAN25Q6NSZ9 544 aa13.15□□□□□ -0.3
STAU1-202ENST00000347458 TRAK1Q9UPV9 953 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms