RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 EXOSC9Q06265 439 aaKnown RBP14.25□□□□□ -0.13
ECM1-201ENST00000346569 AMOTQ4VCS5 1084 aa14.25□□□□□ -0.13
ECM1-201ENST00000346569 MCM10Q7L590 875 aa14.25□□□□□ -0.13
ECM1-201ENST00000346569 RGPD2P0DJD1 1756 aa14.25□□□□□ -0.13
ECM1-201ENST00000346569 CAMTA1Q9Y6Y1 1673 aa14.25□□□□□ -0.13
ECM1-201ENST00000346569 GNAT3A8MTJ3 354 aa14.24□□□□□ -0.13
ECM1-201ENST00000346569 HAP1P54257 671 aaPredicted RBP14.24□□□□□ -0.13
ECM1-201ENST00000346569 PLEKHO1Q53GL0 409 aaPredicted RBP14.24□□□□□ -0.13
ECM1-201ENST00000346569 IL17REQ8NFR9 667 aa14.24□□□□□ -0.13
ECM1-201ENST00000346569 NLRP2Q9NX02 1062 aa14.24□□□□□ -0.13
ECM1-201ENST00000346569 CRB1P82279 1406 aa14.24□□□□□ -0.13
ECM1-201ENST00000346569 LMO7Q8WWI1 1683 aa14.24□□□□□ -0.13
ECM1-201ENST00000346569 BCAR3O75815 825 aa14.24□□□□□ -0.13
ECM1-201ENST00000346569 RTF1Q92541 710 aaKnown RBP14.24□□□□□ -0.13
ECM1-201ENST00000346569 MBIPQ9NS73 344 aa14.24□□□□□ -0.13
ECM1-201ENST00000346569 PLIN1O60240 522 aa14.23□□□□□ -0.13
ECM1-201ENST00000346569 LAS1LQ9Y4W2 734 aaKnown RBP14.23□□□□□ -0.13
ECM1-201ENST00000346569 WDR17Q8IZU2 1322 aa14.22□□□□□ -0.13
ECM1-201ENST00000346569 PLEKHG2Q9H7P9 1386 aa14.22□□□□□ -0.13
ECM1-201ENST00000346569 CSB-PGBD3P0DP91 1061 aa14.22□□□□□ -0.13
ECM1-201ENST00000346569 AKAP4Q5JQC9 854 aa14.22□□□□□ -0.13
ECM1-201ENST00000346569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
ECM1-201ENST00000346569 MAP3K5Q99683 1374 aa14.21□□□□□ -0.13
ECM1-201ENST00000346569 ABCA3Q99758 1704 aa14.21□□□□□ -0.13
ECM1-201ENST00000346569 LRP6O75581 1613 aa14.21□□□□□ -0.13
ECM1-201ENST00000346569 COL22A1Q8NFW1 1626 aaPredicted RBP14.21□□□□□ -0.13
ECM1-201ENST00000346569 VAMP4O75379 141 aa14.21□□□□□ -0.13
ECM1-201ENST00000346569 COL5A2P05997 1499 aaPredicted RBP14.2□□□□□ -0.14
ECM1-201ENST00000346569 TATP17735 454 aaPredicted RBP14.2□□□□□ -0.14
ECM1-201ENST00000346569 RAPGEF4Q8WZA2 1011 aa14.2□□□□□ -0.14
ECM1-201ENST00000346569 ZNF428Q96B54 188 aa14.2□□□□□ -0.14
ECM1-201ENST00000346569 CARD10Q9BWT7 1032 aa14.2□□□□□ -0.14
ECM1-201ENST00000346569 BABAM1Q9NWV8 329 aa14.2□□□□□ -0.14
ECM1-201ENST00000346569 CEMIPQ8WUJ3 1361 aa14.2□□□□□ -0.14
ECM1-201ENST00000346569 FAM208AQ9UK61 1670 aaKnown RBP14.19□□□□□ -0.14
ECM1-201ENST00000346569 ZNF530Q6P9A1 599 aaPredicted RBP14.19□□□□□ -0.14
ECM1-201ENST00000346569 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.19□□□□□ -0.14
ECM1-201ENST00000346569 LGR6Q9HBX8 967 aa14.19□□□□□ -0.14
ECM1-201ENST00000346569 BRPF1P55201 1214 aaPredicted RBP14.18□□□□□ -0.14
ECM1-201ENST00000346569 TAF7Q15545 349 aaPredicted RBP14.18□□□□□ -0.14
ECM1-201ENST00000346569 TSPYL6Q8N831 410 aa14.18□□□□□ -0.14
ECM1-201ENST00000346569 C8orf58Q8NAV2 365 aa14.18□□□□□ -0.14
ECM1-201ENST00000346569 PPP4R2Q9NY27 417 aa14.18□□□□□ -0.14
ECM1-201ENST00000346569 SPATA31A6Q5VVP1 1343 aa14.18□□□□□ -0.14
ECM1-201ENST00000346569 RNMTO43148 476 aaKnown RBP14.17□□□□□ -0.14
ECM1-201ENST00000346569 EVA1CP58658 441 aa14.17□□□□□ -0.14
ECM1-201ENST00000346569 ALDH1L2Q3SY69 923 aa14.17□□□□□ -0.14
ECM1-201ENST00000346569 C20orf194Q5TEA3 1177 aa14.17□□□□□ -0.14
ECM1-201ENST00000346569 LARP1Q6PKG0 1096 aaKnown RBP14.17□□□□□ -0.14
ECM1-201ENST00000346569 TOM1L2Q6ZVM7 507 aa14.17□□□□□ -0.14
ECM1-201ENST00000346569 SSH1Q8WYL5 1049 aa14.17□□□□□ -0.14
ECM1-201ENST00000346569 BTG4Q9NY30 223 aa14.17□□□□□ -0.14
ECM1-201ENST00000346569 MIS18AQ9NYP9 233 aa14.16□□□□□ -0.14
ECM1-201ENST00000346569 SPG7Q9UQ90 795 aa14.16□□□□□ -0.14
ECM1-201ENST00000346569 PDE3AQ14432 1141 aa14.15□□□□□ -0.14
ECM1-201ENST00000346569 C1orf141Q5JVX7 400 aa14.15□□□□□ -0.14
ECM1-201ENST00000346569 EXOC6Q8TAG9 804 aa14.15□□□□□ -0.14
ECM1-201ENST00000346569 MEGF6O75095 1541 aa14.15□□□□□ -0.14
ECM1-201ENST00000346569 PHKG2P15735 406 aa14.15□□□□□ -0.14
ECM1-201ENST00000346569 TWISTNBQ3B726 338 aaPredicted RBP14.15□□□□□ -0.14
ECM1-201ENST00000346569 POTEAQ6S8J7 498 aa14.15□□□□□ -0.14
ECM1-201ENST00000346569 MPRIPQ6WCQ1 1025 aa14.15□□□□□ -0.14
ECM1-201ENST00000346569 STRN4Q9NRL3 753 aa14.15□□□□□ -0.14
ECM1-201ENST00000346569 TSPYL4Q9UJ04 414 aa14.15□□□□□ -0.14
ECM1-201ENST00000346569 ELL2O00472 640 aaPredicted RBP14.14□□□□□ -0.15
ECM1-201ENST00000346569 CYP27B1O15528 508 aa14.14□□□□□ -0.15
ECM1-201ENST00000346569 IFNL2Q8IZJ0 200 aa14.14□□□□□ -0.15
ECM1-201ENST00000346569 OVOS2A0A0G2JMS6 1433 aa14.13□□□□□ -0.15
ECM1-201ENST00000346569 KRT24Q2M2I5 525 aa14.13□□□□□ -0.15
ECM1-201ENST00000346569 MRPL50Q8N5N7 158 aaKnown RBP14.13□□□□□ -0.15
ECM1-201ENST00000346569 CRBNQ96SW2 442 aa14.13□□□□□ -0.15
ECM1-201ENST00000346569 BCL2L13Q9BXK5 485 aa14.13□□□□□ -0.15
ECM1-201ENST00000346569 COL14A1Q05707 1796 aaKnown RBP14.13□□□□□ -0.15
ECM1-201ENST00000346569 LRRC37A3O60309 1634 aa14.12□□□□□ -0.15
ECM1-201ENST00000346569 IL2RBP14784 551 aa14.12□□□□□ -0.15
ECM1-201ENST00000346569 ZCRB1Q8TBF4 217 aaKnown RBP14.12□□□□□ -0.15
ECM1-201ENST00000346569 SMC4Q9NTJ3 1288 aa14.12□□□□□ -0.15
ECM1-201ENST00000346569 ADAMTS2O95450 1211 aa14.11□□□□□ -0.15
ECM1-201ENST00000346569 FRAT1Q92837 279 aaPredicted RBP14.11□□□□□ -0.15
ECM1-201ENST00000346569 NUTM2BA6NNL0 878 aaPredicted RBP14.1□□□□□ -0.15
ECM1-201ENST00000346569 NUTM2EB1AL46 878 aaPredicted RBP14.1□□□□□ -0.15
ECM1-201ENST00000346569 TEFQ10587 303 aa14.1□□□□□ -0.15
ECM1-201ENST00000346569 NKX1-1Q15270 411 aaPredicted RBP14.1□□□□□ -0.15
ECM1-201ENST00000346569 ZKSCAN2Q63HK3 967 aa14.1□□□□□ -0.15
ECM1-201ENST00000346569 NUTM2AQ8IVF1 878 aaPredicted RBP14.1□□□□□ -0.15
ECM1-201ENST00000346569 NOB1Q9ULX3 412 aaKnown RBP14.1□□□□□ -0.15
ECM1-201ENST00000346569 ADAMTS7Q9UKP4 1686 aa14.1□□□□□ -0.15
ECM1-201ENST00000346569 SOS1Q07889 1333 aaPredicted RBP14.09□□□□□ -0.15
ECM1-201ENST00000346569 HSP90AB1P08238 724 aaKnown RBP14.09□□□□□ -0.15
ECM1-201ENST00000346569 EIF4A1P60842 406 aaKnown RBP14.09□□□□□ -0.15
ECM1-201ENST00000346569 ARHGAP45Q92619 1136 aa14.09□□□□□ -0.15
ECM1-201ENST00000346569 DCAF5Q96JK2 942 aa14.09□□□□□ -0.15
ECM1-201ENST00000346569 TNNQ9UQP3 1299 aa14.09□□□□□ -0.15
ECM1-201ENST00000346569 BTBD11A6QL63 1104 aa14.08□□□□□ -0.15
ECM1-201ENST00000346569 IPO8O15397 1037 aaKnown RBP14.08□□□□□ -0.15
ECM1-201ENST00000346569 RLBP1P12271 317 aa14.08□□□□□ -0.15
ECM1-201ENST00000346569 PANK1Q8TE04 598 aa14.08□□□□□ -0.15
ECM1-201ENST00000346569 PKD1L3Q7Z443 1732 aa14.08□□□□□ -0.16
ECM1-201ENST00000346569 KIF16BQ96L93 1317 aa14.08□□□□□ -0.16
ECM1-201ENST00000346569 KCNQ3O43525 872 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms