RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 RGPD2P0DJD1 1756 aa15.38■□□□□ 0.05
UBE2A-201ENST00000346330 NSD2O96028 1365 aa15.37■□□□□ 0.05
UBE2A-201ENST00000346330 TMF1P82094 1093 aa15.37■□□□□ 0.05
UBE2A-201ENST00000346330 DOT1LQ8TEK3 1739 aa15.37■□□□□ 0.05
UBE2A-201ENST00000346330 PRIM1P49642 420 aaKnown RBP15.36■□□□□ 0.05
UBE2A-201ENST00000346330 HSP90AB2PQ58FF8 381 aa15.36■□□□□ 0.05
UBE2A-201ENST00000346330 FHDC1Q9C0D6 1143 aaPredicted RBP15.36■□□□□ 0.05
UBE2A-201ENST00000346330 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
UBE2A-201ENST00000346330 SYTL4Q96C24 671 aaPredicted RBP15.35■□□□□ 0.05
UBE2A-201ENST00000346330 MTFR1LQ9H019 292 aa15.35■□□□□ 0.05
UBE2A-201ENST00000346330 ZCRB1Q8TBF4 217 aaKnown RBP15.34■□□□□ 0.05
UBE2A-201ENST00000346330 RTL1A6NKG5 1358 aa15.34■□□□□ 0.05
UBE2A-201ENST00000346330 SYT17Q9BSW7 474 aa15.33■□□□□ 0.04
UBE2A-201ENST00000346330 COL24A1Q17RW2 1714 aa15.33■□□□□ 0.04
UBE2A-201ENST00000346330 EMILIN1Q9Y6C2 1016 aa15.32■□□□□ 0.04
UBE2A-201ENST00000346330 SLC24A1O60721 1099 aa15.31■□□□□ 0.04
UBE2A-201ENST00000346330 PNPLA7Q6ZV29 1317 aa15.31■□□□□ 0.04
UBE2A-201ENST00000346330 NSD3Q9BZ95 1437 aa15.31■□□□□ 0.04
UBE2A-201ENST00000346330 QSER1Q2KHR3 1735 aa15.31■□□□□ 0.04
UBE2A-201ENST00000346330 LY75O60449 1722 aa15.3■□□□□ 0.04
UBE2A-201ENST00000346330 INSRP06213 1382 aa15.3■□□□□ 0.04
UBE2A-201ENST00000346330 SLC27A3Q5K4L6 730 aa15.29■□□□□ 0.04
UBE2A-201ENST00000346330 ARXQ96QS3 562 aa15.29■□□□□ 0.04
UBE2A-201ENST00000346330 PCGF6Q9BYE7 350 aa15.28■□□□□ 0.04
UBE2A-201ENST00000346330 FLT4P35916 1363 aa15.27■□□□□ 0.04
UBE2A-201ENST00000346330 TOGARAM1Q9Y4F4 1720 aa15.27■□□□□ 0.04
UBE2A-201ENST00000346330 CYP27B1O15528 508 aa15.27■□□□□ 0.04
UBE2A-201ENST00000346330 RAPGEF4Q8WZA2 1011 aa15.27■□□□□ 0.04
UBE2A-201ENST00000346330 TFCP2L1Q9NZI6 479 aa15.26■□□□□ 0.03
UBE2A-201ENST00000346330 CCNL1Q9UK58 526 aaPredicted RBP15.26■□□□□ 0.03
UBE2A-201ENST00000346330 SMG6Q86US8 1419 aaKnown RBP15.26■□□□□ 0.03
UBE2A-201ENST00000346330 PPM1GO15355 546 aaPredicted RBP15.25■□□□□ 0.03
UBE2A-201ENST00000346330 TATP17735 454 aaPredicted RBP15.25■□□□□ 0.03
UBE2A-201ENST00000346330 CDCA8Q53HL2 280 aa15.25■□□□□ 0.03
UBE2A-201ENST00000346330 SMIM5Q71RC9 77 aa15.24■□□□□ 0.03
UBE2A-201ENST00000346330 AMIGO3Q86WK7 504 aa15.24■□□□□ 0.03
UBE2A-201ENST00000346330 ZNF784Q8NCA9 323 aaPredicted RBP15.24■□□□□ 0.03
UBE2A-201ENST00000346330 MAP3K5Q99683 1374 aa15.24■□□□□ 0.03
UBE2A-201ENST00000346330 CGNL1Q0VF96 1302 aa15.23■□□□□ 0.03
UBE2A-201ENST00000346330 KIF20BQ96Q89 1820 aa15.23■□□□□ 0.03
UBE2A-201ENST00000346330 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
UBE2A-201ENST00000346330 COL23A1Q86Y22 540 aaPredicted RBP15.23■□□□□ 0.03
UBE2A-201ENST00000346330 NLGN2Q8NFZ4 835 aa15.23■□□□□ 0.03
UBE2A-201ENST00000346330 NCAPD2Q15021 1401 aa15.23■□□□□ 0.03
UBE2A-201ENST00000346330 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
UBE2A-201ENST00000346330 PCDH11XQ9BZA7 1347 aa15.22■□□□□ 0.03
UBE2A-201ENST00000346330 PCDH11YQ9BZA8 1340 aa15.22■□□□□ 0.03
UBE2A-201ENST00000346330 MPRIPQ6WCQ1 1025 aa15.22■□□□□ 0.03
UBE2A-201ENST00000346330 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
UBE2A-201ENST00000346330 POLR3GLQ9BT43 218 aa15.22■□□□□ 0.03
UBE2A-201ENST00000346330 KIF24Q5T7B8 1368 aa15.22■□□□□ 0.03
UBE2A-201ENST00000346330 TNNT2P45379 298 aaPredicted RBP15.21■□□□□ 0.03
UBE2A-201ENST00000346330 MSL1Q68DK7 614 aa15.21■□□□□ 0.03
UBE2A-201ENST00000346330 SLC16A10Q8TF71 515 aa15.21■□□□□ 0.03
UBE2A-201ENST00000346330 EYA1Q99502 592 aa15.21■□□□□ 0.03
UBE2A-201ENST00000346330 POLKQ9UBT6 870 aa15.21■□□□□ 0.03
UBE2A-201ENST00000346330 PALLDQ8WX93 1383 aa15.21■□□□□ 0.02
UBE2A-201ENST00000346330 C5P01031 1676 aa15.2■□□□□ 0.02
UBE2A-201ENST00000346330 TIMELESSQ9UNS1 1208 aa15.2■□□□□ 0.02
UBE2A-201ENST00000346330 WASHC2AQ641Q2 1341 aa15.19■□□□□ 0.02
UBE2A-201ENST00000346330 CHD4Q14839 1912 aa15.19■□□□□ 0.02
UBE2A-201ENST00000346330 HSPA5P11021 654 aaKnown RBP15.19■□□□□ 0.02
UBE2A-201ENST00000346330 PIGBQ92521 554 aa15.19■□□□□ 0.02
UBE2A-201ENST00000346330 PKD1L3Q7Z443 1732 aa15.18■□□□□ 0.02
UBE2A-201ENST00000346330 ANKRD26Q9UPS8 1709 aa15.18■□□□□ 0.02
UBE2A-201ENST00000346330 TAF1LQ8IZX4 1826 aa15.17■□□□□ 0.02
UBE2A-201ENST00000346330 POLD1P28340 1107 aa15.17■□□□□ 0.02
UBE2A-201ENST00000346330 EIF4A2Q14240 407 aaKnown RBP15.17■□□□□ 0.02
UBE2A-201ENST00000346330 NKX1-1Q15270 411 aaPredicted RBP15.17■□□□□ 0.02
UBE2A-201ENST00000346330 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
UBE2A-201ENST00000346330 CLSPNQ9HAW4 1339 aa15.17■□□□□ 0.02
UBE2A-201ENST00000346330 GPR162Q16538 588 aa15.16■□□□□ 0.02
UBE2A-201ENST00000346330 YBX3P16989 372 aaKnown RBP eCLIP15.15■□□□□ 0.023e-7■■□□□ 11.5
UBE2A-201ENST00000346330 PELP1Q8IZL8 1130 aaKnown RBP15.15■□□□□ 0.02
UBE2A-201ENST00000346330 PANK3Q9H999 370 aa15.15■□□□□ 0.02
UBE2A-201ENST00000346330 ASAP1Q9ULH1 1129 aa15.15■□□□□ 0.02
UBE2A-201ENST00000346330 LINC00116Q8NCU8 138 aa15.14■□□□□ 0.01
UBE2A-201ENST00000346330 ITGB4P16144 1822 aa15.14■□□□□ 0.01
UBE2A-201ENST00000346330 PHF14O94880 888 aa15.13■□□□□ 0.01
UBE2A-201ENST00000346330 PHKG2P15735 406 aa15.13■□□□□ 0.01
UBE2A-201ENST00000346330 EIF4G2P78344 907 aaKnown RBP eCLIP15.13■□□□□ 0.01
UBE2A-201ENST00000346330 ITPK1Q13572 414 aa15.13■□□□□ 0.01
UBE2A-201ENST00000346330 SPG7Q9UQ90 795 aa15.13■□□□□ 0.01
UBE2A-201ENST00000346330 MAP2P11137 1827 aaKnown RBP15.13■□□□□ 0.01
UBE2A-201ENST00000346330 C4BP0C0L5 1744 aa15.12■□□□□ 0.01
UBE2A-201ENST00000346330 LOC102724428A0A0B4J2F2 783 aa15.11■□□□□ 0.01
UBE2A-201ENST00000346330 SIK1P57059 783 aa15.11■□□□□ 0.01
UBE2A-201ENST00000346330 ATG3Q9NT62 314 aa15.11■□□□□ 0.01
UBE2A-201ENST00000346330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.11■□□□□ 0.01
UBE2A-201ENST00000346330 IGSF1Q8N6C5 1336 aa15.11■□□□□ 0.01
UBE2A-201ENST00000346330 UBR3Q6ZT12 1888 aa15.1■□□□□ 0.01
UBE2A-201ENST00000346330 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.1■□□□□ 0.01
UBE2A-201ENST00000346330 AEBP1Q8IUX7 1158 aa15.1■□□□□ 0.01
UBE2A-201ENST00000346330 SMARCC1Q92922 1105 aaPredicted RBP15.1■□□□□ 0.01
UBE2A-201ENST00000346330 AK7Q96M32 723 aa15.1■□□□□ 0.01
UBE2A-201ENST00000346330 SLC4A9Q96Q91 983 aa15.1■□□□□ 0.01
UBE2A-201ENST00000346330 TMOD3Q9NYL9 352 aa15.1■□□□□ 0.01
UBE2A-201ENST00000346330 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
UBE2A-201ENST00000346330 WWC3Q9ULE0 1092 aa15.09■□□□□ 0.01
UBE2A-201ENST00000346330 CCER1Q8TC90 406 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms