RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 CWC27Q6UX04 472 aaKnown RBP7.7□□□□□ -1.18
PCDH18-201ENST00000344876 DDX12PQ92771 950 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 SERPINA10Q9UK55 444 aa7.7□□□□□ -1.18
PCDH18-201ENST00000344876 UPF3BQ9BZI7 483 aaKnown RBP7.69□□□□□ -1.18
PCDH18-201ENST00000344876 FAM107BQ9H098 131 aa7.69□□□□□ -1.18
PCDH18-201ENST00000344876 TBC1D2BQ9UPU7 963 aa7.69□□□□□ -1.18
PCDH18-201ENST00000344876 TDRD9Q8NDG6 1382 aaKnown RBP7.69□□□□□ -1.18
PCDH18-201ENST00000344876 URI1O94763 535 aaPredicted RBP7.69□□□□□ -1.18
PCDH18-201ENST00000344876 DHX8Q14562 1220 aaKnown RBP7.69□□□□□ -1.18
PCDH18-201ENST00000344876 IL1RAPL2Q9NP60 686 aa7.69□□□□□ -1.18
PCDH18-201ENST00000344876 CFAP45Q9UL16 551 aa7.69□□□□□ -1.18
PCDH18-201ENST00000344876 SPATA24Q86W54 205 aa7.69□□□□□ -1.18
PCDH18-201ENST00000344876 NUP62CLQ9H1M0 184 aa7.69□□□□□ -1.18
PCDH18-201ENST00000344876 INF2Q27J81 1249 aa7.69□□□□□ -1.18
PCDH18-201ENST00000344876 TTC39AQ5SRH9 613 aa7.69□□□□□ -1.18
PCDH18-201ENST00000344876 RPAINQ86UA6 219 aa7.69□□□□□ -1.18
PCDH18-201ENST00000344876 KLHL10Q6JEL2 608 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 CERS3Q8IU89 383 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 JAKMIP1Q96N16 626 aaKnown RBP7.68□□□□□ -1.18
PCDH18-201ENST00000344876 CCDC85AQ96PX6 553 aaPredicted RBP7.68□□□□□ -1.18
PCDH18-201ENST00000344876 SLC4A2P04920 1241 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 ARHGAP29Q52LW3 1261 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 RAPGEF4Q8WZA2 1011 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 WDR33Q9C0J8 1336 aaKnown RBP7.68□□□□□ -1.18
PCDH18-201ENST00000344876 MAP2K1Q02750 393 aaPredicted RBP7.68□□□□□ -1.18
PCDH18-201ENST00000344876 FKBP4Q02790 459 aaKnown RBP eCLIP7.68□□□□□ -1.18
PCDH18-201ENST00000344876 CPLX3Q8WVH0 158 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 RAI14Q9P0K7 980 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 FAM184BQ9ULE4 1060 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 EPB41L2O43491 1005 aaKnown RBP7.68□□□□□ -1.18
PCDH18-201ENST00000344876 SH3BP5O60239 455 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 EIF5P55010 431 aaKnown RBP7.68□□□□□ -1.18
PCDH18-201ENST00000344876 TWISTNBQ3B726 338 aaPredicted RBP7.68□□□□□ -1.18
PCDH18-201ENST00000344876 RBM42Q9BTD8 480 aaKnown RBP7.68□□□□□ -1.18
PCDH18-201ENST00000344876 PRKAR2BP31323 418 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 UBE4AQ14139 1066 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 C16orf45Q96MC5 204 aaPredicted RBP7.68□□□□□ -1.18
PCDH18-201ENST00000344876 CRACR2AQ9BSW2 395 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 GOPCQ9HD26 462 aa7.68□□□□□ -1.18
PCDH18-201ENST00000344876 CCDC88BA6NC98 1476 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 CNNM1Q9NRU3 951 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 GUCY1B3Q02153 619 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 TTC31Q49AM3 519 aaPredicted RBP7.67□□□□□ -1.18
PCDH18-201ENST00000344876 LIMCH1Q9UPQ0 1083 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 CCDC69A6NI79 296 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 PPFIA3O75145 1194 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 ATP2C2O75185 946 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 PTPN14Q15678 1187 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 ZSCAN30Q86W11 494 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 ZSWIM4Q9H7M6 989 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 CCDC7Q96M83 1385 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 GOLGA6L9A6NEM1 432 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 MYL6BP14649 208 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 EZRP15311 586 aaKnown RBP7.67□□□□□ -1.18
PCDH18-201ENST00000344876 GDPD2Q9HCC8 539 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 PDRG1Q9NUG6 133 aa7.67□□□□□ -1.18
PCDH18-201ENST00000344876 CHMP2AO43633 222 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 GNAI2P04899 355 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 MCM2P49736 904 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 STIM1Q13586 685 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 CEP57L1Q8IYX8 460 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 RPUSD2Q8IZ73 545 aaKnown RBP7.66□□□□□ -1.18
PCDH18-201ENST00000344876 WASHC2AQ641Q2 1341 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 GNAI3P08754 354 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 MAP2K2P36507 400 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 ANKRD18AQ8IVF6 992 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 CKAP2LQ8IYA6 745 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 JMYQ8N9B5 988 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 NEBLO76041 1014 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 CCDC184Q52MB2 194 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 CCDC83Q8IWF9 413 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 USP25Q9UHP3 1055 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 MATR3P43243 847 aaKnown RBP eCLIP7.66□□□□□ -1.18
PCDH18-201ENST00000344876 NUTM1Q86Y26 1132 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 CCDC82Q8N4S0 544 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 WHAMMQ8TF30 809 aa7.66□□□□□ -1.18
PCDH18-201ENST00000344876 SHTN1A0MZ66 631 aa7.65□□□□□ -1.18
PCDH18-201ENST00000344876 CBFA2T2O43439 604 aa7.65□□□□□ -1.18
PCDH18-201ENST00000344876 KIF4BQ2VIQ3 1234 aa7.65□□□□□ -1.18
PCDH18-201ENST00000344876 NBPF1Q3BBV0 1214 aa7.65□□□□□ -1.18
PCDH18-201ENST00000344876 ISM2Q6H9L7 571 aa7.65□□□□□ -1.18
PCDH18-201ENST00000344876 NLRP6P59044 892 aa7.65□□□□□ -1.18
PCDH18-201ENST00000344876 CCDC30Q5VVM6 783 aa7.65□□□□□ -1.18
PCDH18-201ENST00000344876 BLOC1S2Q6QNY1 142 aa7.65□□□□□ -1.18
PCDH18-201ENST00000344876 TRIM22Q8IYM9 498 aa7.65□□□□□ -1.18
PCDH18-201ENST00000344876 ZNF513Q8N8E2 541 aaPredicted RBP7.65□□□□□ -1.18
PCDH18-201ENST00000344876 TTC16Q8NEE8 873 aa7.65□□□□□ -1.18
PCDH18-201ENST00000344876 TAF4BQ92750 862 aa7.65□□□□□ -1.18
PCDH18-201ENST00000344876 SMARCA5O60264 1052 aaPredicted RBP7.65□□□□□ -1.18
PCDH18-201ENST00000344876 USP5P45974 858 aa7.65□□□□□ -1.18
PCDH18-201ENST00000344876 PIP4K2AP48426 406 aaPredicted RBP7.65□□□□□ -1.18
PCDH18-201ENST00000344876 MACROD2A1Z1Q3 448 aa7.65□□□□□ -1.19
PCDH18-201ENST00000344876 CASTP20810 708 aaKnown RBP7.65□□□□□ -1.19
PCDH18-201ENST00000344876 WWC2Q6AWC2 1192 aa7.65□□□□□ -1.19
PCDH18-201ENST00000344876 AACSQ86V21 672 aa7.65□□□□□ -1.19
PCDH18-201ENST00000344876 LUC7LQ9NQ29 371 aaKnown RBP7.65□□□□□ -1.19
PCDH18-201ENST00000344876 DACH1Q9UI36 760 aa7.65□□□□□ -1.19
PCDH18-201ENST00000344876 IGSF3O75054 1194 aa7.65□□□□□ -1.19
PCDH18-201ENST00000344876 CASQ1P31415 396 aa7.65□□□□□ -1.19
PCDH18-201ENST00000344876 MAP3K11Q16584 847 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms