RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 MROH2BQ7Z745 1585 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 CCDC160A6NGH7 325 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 UBTFL1P0CB47 393 aaPredicted RBP9.72□□□□□ -0.85
MCPH1-201ENST00000344683 LIG1P18858 919 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 CEBPZQ03701 1054 aaKnown RBP9.72□□□□□ -0.85
MCPH1-201ENST00000344683 DNAJC21Q5F1R6 531 aaKnown RBP9.72□□□□□ -0.85
MCPH1-201ENST00000344683 LARP1BQ659C4 914 aaKnown RBP9.72□□□□□ -0.85
MCPH1-201ENST00000344683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.72□□□□□ -0.85
MCPH1-201ENST00000344683 EHBP1Q8NDI1 1231 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 FSD2A1L4K1 749 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 CCDC178Q5BJE1 867 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 FKBP15Q5T1M5 1219 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 FOXD1Q16676 465 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 SPECC1Q5M775 1068 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 RIPK4P57078 832 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 BRD4O60885 1362 aaPredicted RBP9.72□□□□□ -0.85
MCPH1-201ENST00000344683 URI1O94763 535 aaPredicted RBP9.72□□□□□ -0.85
MCPH1-201ENST00000344683 FBF1Q8TES7 1133 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.72□□□□□ -0.85
MCPH1-201ENST00000344683 RAI14Q9P0K7 980 aa9.72□□□□□ -0.85
MCPH1-201ENST00000344683 PPP6R1Q9UPN7 881 aa9.71□□□□□ -0.85
MCPH1-201ENST00000344683 CADPSQ9ULU8 1353 aa9.71□□□□□ -0.85
MCPH1-201ENST00000344683 IBSPP21815 317 aaPredicted RBP9.71□□□□□ -0.85
MCPH1-201ENST00000344683 BACH2Q9BYV9 841 aa9.71□□□□□ -0.85
MCPH1-201ENST00000344683 CCDC171Q6TFL3 1326 aa9.71□□□□□ -0.85
MCPH1-201ENST00000344683 A0A1B0GUA9 196 aa9.71□□□□□ -0.86
MCPH1-201ENST00000344683 TOP1P11387 765 aaKnown RBP9.71□□□□□ -0.86
MCPH1-201ENST00000344683 L3MBTL2Q969R5 705 aa9.71□□□□□ -0.86
MCPH1-201ENST00000344683 CNTLNQ9NXG0 1405 aa9.71□□□□□ -0.86
MCPH1-201ENST00000344683 GBP6Q6ZN66 633 aa9.71□□□□□ -0.86
MCPH1-201ENST00000344683 CAVIN2O95810 425 aa9.71□□□□□ -0.86
MCPH1-201ENST00000344683 CKAP4Q07065 602 aaKnown RBP9.71□□□□□ -0.86
MCPH1-201ENST00000344683 CLIP2Q9UDT6 1046 aa9.71□□□□□ -0.86
MCPH1-201ENST00000344683 SYCE3A1L190 88 aa9.7□□□□□ -0.86
MCPH1-201ENST00000344683 CCDC69A6NI79 296 aa9.7□□□□□ -0.86
MCPH1-201ENST00000344683 GNAI3P08754 354 aa9.7□□□□□ -0.86
MCPH1-201ENST00000344683 CCDC50Q8IVM0 306 aa9.7□□□□□ -0.86
MCPH1-201ENST00000344683 CCDC155Q8N6L0 562 aa9.7□□□□□ -0.86
MCPH1-201ENST00000344683 DIAPH1O60610 1272 aaKnown RBP9.7□□□□□ -0.86
MCPH1-201ENST00000344683 TCHPQ9BT92 498 aa9.7□□□□□ -0.86
MCPH1-201ENST00000344683 SUDS3Q9H7L9 328 aaPredicted RBP9.7□□□□□ -0.86
MCPH1-201ENST00000344683 RRBP1Q9P2E9 1410 aaKnown RBP9.7□□□□□ -0.86
MCPH1-201ENST00000344683 ARFGAP3Q9NP61 516 aa9.7□□□□□ -0.86
MCPH1-201ENST00000344683 KRT32Q14532 448 aa9.7□□□□□ -0.86
MCPH1-201ENST00000344683 EID1Q9Y6B2 187 aa9.7□□□□□ -0.86
MCPH1-201ENST00000344683 SMARCA4P51532 1647 aa9.7□□□□□ -0.86
MCPH1-201ENST00000344683 ELL2O00472 640 aaPredicted RBP9.7□□□□□ -0.86
MCPH1-201ENST00000344683 TUBB4AP04350 444 aa9.7□□□□□ -0.86
MCPH1-201ENST00000344683 IKQ13123 557 aaPredicted RBP9.7□□□□□ -0.86
MCPH1-201ENST00000344683 PDE3AQ14432 1141 aa9.7□□□□□ -0.86
MCPH1-201ENST00000344683 OPA1O60313 960 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 SOGA3Q5TF21 947 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 CEP135Q66GS9 1140 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 MIA2Q96PC5 1412 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 APAF1O14727 1248 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 EIF2S2P20042 333 aaKnown RBP9.69□□□□□ -0.86
MCPH1-201ENST00000344683 IFI16Q16666 785 aaKnown RBP9.69□□□□□ -0.86
MCPH1-201ENST00000344683 MIPOL1Q8TD10 442 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 TSG101Q99816 390 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 HMGB1P1B2RPK0 211 aaPredicted RBP9.69□□□□□ -0.86
MCPH1-201ENST00000344683 TTC14Q96N46 770 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 TACC1O75410 805 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 SH3BGRP55822 239 aaPredicted RBP9.69□□□□□ -0.86
MCPH1-201ENST00000344683 SH2D4BQ5SQS7 431 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 TSNARE1Q96NA8 513 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 CARMIL2Q6F5E8 1435 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 SNW1Q13573 536 aaKnown RBP9.69□□□□□ -0.86
MCPH1-201ENST00000344683 LARP1Q6PKG0 1096 aaKnown RBP9.69□□□□□ -0.86
MCPH1-201ENST00000344683 HOMER2Q9NSB8 354 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 KIF4AO95239 1232 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 CCDC150Q8NCX0 1101 aa9.69□□□□□ -0.86
MCPH1-201ENST00000344683 CCDC121Q6ZUS5 278 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 NEUROD6Q96NK8 337 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 TRERF1Q96PN7 1200 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 WASHC2AQ641Q2 1341 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 ANAPC4Q9UJX5 808 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 YEATS4O95619 227 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 RNF168Q8IYW5 571 aaPredicted RBP9.68□□□□□ -0.86
MCPH1-201ENST00000344683 HLTFQ14527 1009 aaKnown RBP eCLIP9.68□□□□□ -0.86
MCPH1-201ENST00000344683 UVSSAQ2YD98 709 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 CCDC7Q96M83 1385 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 ZSCAN25Q6NSZ9 544 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 CACNA2D4Q7Z3S7 1137 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 OTUD6BQ8N6M0 293 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 RASSF4Q9H2L5 321 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 USH1CQ9Y6N9 552 aa9.68□□□□□ -0.86
MCPH1-201ENST00000344683 A0A1B0GUL7 405 aa9.67□□□□□ -0.86
MCPH1-201ENST00000344683 MAATS1Q7Z4T9 603 aa9.67□□□□□ -0.86
MCPH1-201ENST00000344683 IKBKGQ9Y6K9 419 aa9.67□□□□□ -0.86
MCPH1-201ENST00000344683 MICALL1Q8N3F8 863 aa9.67□□□□□ -0.86
MCPH1-201ENST00000344683 LTV1Q96GA3 475 aaPredicted RBP9.67□□□□□ -0.86
MCPH1-201ENST00000344683 FERMT1Q9BQL6 677 aa9.67□□□□□ -0.86
MCPH1-201ENST00000344683 FAM184BQ9ULE4 1060 aa9.67□□□□□ -0.86
MCPH1-201ENST00000344683 EBAG9O00559 213 aa9.67□□□□□ -0.86
MCPH1-201ENST00000344683 PRDM2Q13029 1718 aa9.67□□□□□ -0.86
MCPH1-201ENST00000344683 RIC3Q7Z5B4 369 aa9.67□□□□□ -0.86
MCPH1-201ENST00000344683 CCDC94Q9BW85 323 aaPredicted RBP9.67□□□□□ -0.86
MCPH1-201ENST00000344683 SRRTQ9BXP5 876 aaKnown RBP9.67□□□□□ -0.86
MCPH1-201ENST00000344683 CEP120Q8N960 986 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms