RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
SGCA-202ENST00000344627 ARXQ96QS3 562 aa17.22■□□□□ 0.35
SGCA-202ENST00000344627 PDGFDQ9GZP0 370 aaPredicted RBP17.21■□□□□ 0.35
SGCA-202ENST00000344627 PAPPAQ13219 1627 aa17.21■□□□□ 0.35
SGCA-202ENST00000344627 POLD1P28340 1107 aa17.2■□□□□ 0.34
SGCA-202ENST00000344627 RAPGEF4Q8WZA2 1011 aa17.2■□□□□ 0.34
SGCA-202ENST00000344627 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
SGCA-202ENST00000344627 FHDC1Q9C0D6 1143 aaPredicted RBP17.2■□□□□ 0.34
SGCA-202ENST00000344627 KIF20BQ96Q89 1820 aa17.19■□□□□ 0.34
SGCA-202ENST00000344627 INSRP06213 1382 aa17.18■□□□□ 0.34
SGCA-202ENST00000344627 LRRC4BQ9NT99 713 aa17.18■□□□□ 0.34
SGCA-202ENST00000344627 TATP17735 454 aaPredicted RBP17.17■□□□□ 0.34
SGCA-202ENST00000344627 PRIM1P49642 420 aaKnown RBP17.17■□□□□ 0.34
SGCA-202ENST00000344627 EIF4G2P78344 907 aaKnown RBP eCLIP17.17■□□□□ 0.34
SGCA-202ENST00000344627 SYTL4Q96C24 671 aaPredicted RBP17.17■□□□□ 0.34
SGCA-202ENST00000344627 CARD14Q9BXL6 1004 aa17.17■□□□□ 0.34
SGCA-202ENST00000344627 RGPD2P0DJD1 1756 aa17.17■□□□□ 0.34
SGCA-202ENST00000344627 BTAF1O14981 1849 aa17.17■□□□□ 0.34
SGCA-202ENST00000344627 FLT4P35916 1363 aa17.16■□□□□ 0.34
SGCA-202ENST00000344627 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
SGCA-202ENST00000344627 ZNF827Q17R98 1081 aa17.16■□□□□ 0.34
SGCA-202ENST00000344627 TFCP2L1Q9NZI6 479 aa17.16■□□□□ 0.34
SGCA-202ENST00000344627 MYOM1P52179 1685 aa17.16■□□□□ 0.34
SGCA-202ENST00000344627 NSD2O96028 1365 aa17.15■□□□□ 0.34
SGCA-202ENST00000344627 FLAD1Q8NFF5 587 aa17.15■□□□□ 0.34
SGCA-202ENST00000344627 PCDH11XQ9BZA7 1347 aa17.15■□□□□ 0.34
SGCA-202ENST00000344627 PCDH11YQ9BZA8 1340 aa17.15■□□□□ 0.34
SGCA-202ENST00000344627 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
SGCA-202ENST00000344627 HSPA5P11021 654 aaKnown RBP17.14■□□□□ 0.33
SGCA-202ENST00000344627 NBPF6Q5VWK0 638 aa17.14■□□□□ 0.33
SGCA-202ENST00000344627 USHBP1Q8N6Y0 703 aa17.14■□□□□ 0.33
SGCA-202ENST00000344627 NBPF4Q96M43 638 aa17.14■□□□□ 0.33
SGCA-202ENST00000344627 QSER1Q2KHR3 1735 aa17.13■□□□□ 0.33
SGCA-202ENST00000344627 CCNL1Q9UK58 526 aaPredicted RBP17.13■□□□□ 0.33
SGCA-202ENST00000344627 MEGF6O75095 1541 aa17.12■□□□□ 0.33
SGCA-202ENST00000344627 HSP90AB2PQ58FF8 381 aa17.12■□□□□ 0.33
SGCA-202ENST00000344627 PNPLA7Q6ZV29 1317 aa17.12■□□□□ 0.33
SGCA-202ENST00000344627 PLEKHG2Q9H7P9 1386 aa17.12■□□□□ 0.33
SGCA-202ENST00000344627 SMARCC1Q92922 1105 aaPredicted RBP17.11■□□□□ 0.33
SGCA-202ENST00000344627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.1■□□□□ 0.33
SGCA-202ENST00000344627 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
SGCA-202ENST00000344627 TNNT2P45379 298 aaPredicted RBP17.09■□□□□ 0.33
SGCA-202ENST00000344627 MAP2P11137 1827 aaKnown RBP17.08■□□□□ 0.33
SGCA-202ENST00000344627 GPR162Q16538 588 aa17.08■□□□□ 0.32
SGCA-202ENST00000344627 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
SGCA-202ENST00000344627 WASHC2AQ641Q2 1341 aa17.07■□□□□ 0.32
SGCA-202ENST00000344627 GRIN3BO60391 1043 aa17.07■□□□□ 0.32
SGCA-202ENST00000344627 NKX1-1Q15270 411 aaPredicted RBP17.07■□□□□ 0.32
SGCA-202ENST00000344627 ZNF784Q8NCA9 323 aaPredicted RBP17.07■□□□□ 0.32
SGCA-202ENST00000344627 LY75O60449 1722 aa17.07■□□□□ 0.32
SGCA-202ENST00000344627 PANK3Q9H999 370 aa17.06■□□□□ 0.32
SGCA-202ENST00000344627 COL24A1Q17RW2 1714 aa17.06■□□□□ 0.32
SGCA-202ENST00000344627 NCAPD2Q15021 1401 aa17.05■□□□□ 0.32
SGCA-202ENST00000344627 UTRNP46939 3433 aa17.05■□□□□ 0.32
SGCA-202ENST00000344627 DOT1LQ8TEK3 1739 aa17.05■□□□□ 0.32
SGCA-202ENST00000344627 PALLDQ8WX93 1383 aa17.03■□□□□ 0.32
SGCA-202ENST00000344627 CD2APQ9Y5K6 639 aa17.03■□□□□ 0.32
SGCA-202ENST00000344627 SHANK3Q9BYB0 1731 aa17.03■□□□□ 0.32
SGCA-202ENST00000344627 CYP27B1O15528 508 aa17.02■□□□□ 0.32
SGCA-202ENST00000344627 MSH5O43196 834 aa17.02■□□□□ 0.32
SGCA-202ENST00000344627 MPRIPQ6WCQ1 1025 aa17.02■□□□□ 0.32
SGCA-202ENST00000344627 COL23A1Q86Y22 540 aaPredicted RBP17.02■□□□□ 0.32
SGCA-202ENST00000344627 POLKQ9UBT6 870 aa17.01■□□□□ 0.31
SGCA-202ENST00000344627 KCNQ4P56696 695 aa17■□□□□ 0.31
SGCA-202ENST00000344627 IFNL2Q8IZJ0 200 aa17■□□□□ 0.31
SGCA-202ENST00000344627 KLHL34Q8N239 644 aa17■□□□□ 0.31
SGCA-202ENST00000344627 AK7Q96M32 723 aa17■□□□□ 0.31
SGCA-202ENST00000344627 SSFA2P28290 1259 aa16.99■□□□□ 0.31
SGCA-202ENST00000344627 EYA1Q99502 592 aa16.99■□□□□ 0.31
SGCA-202ENST00000344627 ANKRD26Q9UPS8 1709 aa16.99■□□□□ 0.31
SGCA-202ENST00000344627 HSP90AB1P08238 724 aaKnown RBP16.98■□□□□ 0.31
SGCA-202ENST00000344627 MORC1Q86VD1 984 aa16.98■□□□□ 0.31
SGCA-202ENST00000344627 TMOD3Q9NYL9 352 aa16.98■□□□□ 0.31
SGCA-202ENST00000344627 KNSTRNQ9Y448 316 aa16.98■□□□□ 0.31
SGCA-202ENST00000344627 CHD4Q14839 1912 aa16.98■□□□□ 0.31
SGCA-202ENST00000344627 PIGBQ92521 554 aa16.97■□□□□ 0.31
SGCA-202ENST00000344627 PKD1L3Q7Z443 1732 aa16.96■□□□□ 0.31
SGCA-202ENST00000344627 LOC102724428A0A0B4J2F2 783 aa16.96■□□□□ 0.31
SGCA-202ENST00000344627 SIK1P57059 783 aa16.96■□□□□ 0.31
SGCA-202ENST00000344627 C1QTNF8P60827 252 aa16.96■□□□□ 0.31
SGCA-202ENST00000344627 PHKG2P15735 406 aa16.95■□□□□ 0.3
SGCA-202ENST00000344627 EIF4A2Q14240 407 aaKnown RBP16.95■□□□□ 0.3
SGCA-202ENST00000344627 C5P01031 1676 aa16.94■□□□□ 0.3
SGCA-202ENST00000344627 ERVV-2B6SEH9 535 aa16.94■□□□□ 0.3
SGCA-202ENST00000344627 AMOTQ4VCS5 1084 aa16.94■□□□□ 0.3
SGCA-202ENST00000344627 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
SGCA-202ENST00000344627 NLGN2Q8NFZ4 835 aa16.94■□□□□ 0.3
SGCA-202ENST00000344627 GIGYF1O75420 1035 aaPredicted RBP16.93■□□□□ 0.3
SGCA-202ENST00000344627 TUBGCP6Q96RT7 1819 aa16.92■□□□□ 0.3
SGCA-202ENST00000344627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.92■□□□□ 0.3
SGCA-202ENST00000344627 PLEKHO1Q53GL0 409 aaPredicted RBP16.92■□□□□ 0.3
SGCA-202ENST00000344627 DCAF5Q96JK2 942 aa16.92■□□□□ 0.3
SGCA-202ENST00000344627 IGSF1Q8N6C5 1336 aa16.92■□□□□ 0.3
SGCA-202ENST00000344627 ITGB4P16144 1822 aa16.91■□□□□ 0.3
SGCA-202ENST00000344627 C4BP0C0L5 1744 aa16.91■□□□□ 0.3
SGCA-202ENST00000344627 KIF7Q2M1P5 1343 aa16.91■□□□□ 0.3
SGCA-202ENST00000344627 ADRA2BP18089 450 aa16.9■□□□□ 0.3
SGCA-202ENST00000344627 ATP6V1AP38606 617 aa16.9■□□□□ 0.3
SGCA-202ENST00000344627 CNGB1Q14028 1251 aaPredicted RBP16.9■□□□□ 0.3
SGCA-202ENST00000344627 RC3H1Q5TC82 1133 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms