RNA–Protein interactions for RNA: ENST00000343315.9

TMPO-203, Transcript of thymopoietin, humanhuman

TSL 5 BASIC

Gene TMPO, Length 2,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPO-203ENST00000343315 SIRT1Q96EB6 747 aa19.56■□□□□ 0.72
TMPO-203ENST00000343315 COL16A1Q07092 1604 aaPredicted RBP19.56■□□□□ 0.72
TMPO-203ENST00000343315 AHDC1Q5TGY3 1603 aaPredicted RBP19.56■□□□□ 0.72
TMPO-203ENST00000343315 ADGRB1O14514 1584 aa19.56■□□□□ 0.72
TMPO-203ENST00000343315 MYOM1P52179 1685 aa19.56■□□□□ 0.72
TMPO-203ENST00000343315 NUTM2FA1L443 756 aa19.56■□□□□ 0.72
TMPO-203ENST00000343315 WDR63Q8IWG1 891 aa19.56■□□□□ 0.72
TMPO-203ENST00000343315 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
TMPO-203ENST00000343315 CDC42BPGQ6DT37 1551 aa19.55■□□□□ 0.72
TMPO-203ENST00000343315 MYRIPQ8NFW9 859 aa19.55■□□□□ 0.72
TMPO-203ENST00000343315 ORAI2Q96SN7 254 aa19.55■□□□□ 0.72
TMPO-203ENST00000343315 DDX17Q92841 729 aaKnown RBP19.54■□□□□ 0.72
TMPO-203ENST00000343315 LMBRD1Q9NUN5 540 aa19.54■□□□□ 0.72
TMPO-203ENST00000343315 JCADQ9P266 1359 aa19.54■□□□□ 0.72
TMPO-203ENST00000343315 RBM42Q9BTD8 480 aaKnown RBP19.53■□□□□ 0.72
TMPO-203ENST00000343315 GTF2E1P29083 439 aaPredicted RBP19.53■□□□□ 0.72
TMPO-203ENST00000343315 ESCO1Q5FWF5 840 aa19.53■□□□□ 0.72
TMPO-203ENST00000343315 CBX1P83916 185 aa19.52■□□□□ 0.72
TMPO-203ENST00000343315 RUNDC1Q96C34 613 aa19.52■□□□□ 0.72
TMPO-203ENST00000343315 TCP11L2Q8N4U5 519 aa19.52■□□□□ 0.72
TMPO-203ENST00000343315 POLR3AO14802 1390 aaPredicted RBP19.52■□□□□ 0.72
TMPO-203ENST00000343315 LETM1O95202 739 aaPredicted RBP19.51■□□□□ 0.71
TMPO-203ENST00000343315 DLC1Q96QB1 1528 aa19.51■□□□□ 0.71
TMPO-203ENST00000343315 KIAA1210Q9ULL0 1709 aa19.51■□□□□ 0.71
TMPO-203ENST00000343315 NUCB1Q02818 461 aa19.5■□□□□ 0.71
TMPO-203ENST00000343315 ZNF710Q8N1W2 664 aa19.5■□□□□ 0.71
TMPO-203ENST00000343315 DDX19BQ9UMR2 479 aa19.5■□□□□ 0.71
TMPO-203ENST00000343315 NHSL1Q5SYE7 1610 aa19.5■□□□□ 0.71
TMPO-203ENST00000343315 AK9Q5TCS8 1911 aa19.5■□□□□ 0.71
TMPO-203ENST00000343315 NUCB2P80303 420 aa19.49■□□□□ 0.71
TMPO-203ENST00000343315 KIAA2012Q0VF49 1180 aa19.49■□□□□ 0.71
TMPO-203ENST00000343315 BMP2KLQ5H9B9 411 aa19.49■□□□□ 0.71
TMPO-203ENST00000343315 ILDR2Q71H61 639 aa19.49■□□□□ 0.71
TMPO-203ENST00000343315 JARID2Q92833 1246 aaPredicted RBP19.49■□□□□ 0.71
TMPO-203ENST00000343315 KIF16BQ96L93 1317 aa19.49■□□□□ 0.71
TMPO-203ENST00000343315 LRSAM1Q6UWE0 723 aa19.48■□□□□ 0.71
TMPO-203ENST00000343315 ITPRIPQ8IWB1 547 aa19.48■□□□□ 0.71
TMPO-203ENST00000343315 LNPKQ9C0E8 428 aa19.48■□□□□ 0.71
TMPO-203ENST00000343315 RBM27Q9P2N5 1060 aaKnown RBP19.48■□□□□ 0.71
TMPO-203ENST00000343315 LRRC59Q96AG4 307 aaKnown RBP19.48■□□□□ 0.71
TMPO-203ENST00000343315 TRIM27P14373 513 aa19.47■□□□□ 0.71
TMPO-203ENST00000343315 DNTTIP2Q5QJE6 756 aaKnown RBP19.47■□□□□ 0.71
TMPO-203ENST00000343315 TSC1Q92574 1164 aa19.47■□□□□ 0.71
TMPO-203ENST00000343315 PRIMPOLQ96LW4 560 aa19.47■□□□□ 0.71
TMPO-203ENST00000343315 CYP2E1P05181 493 aaPredicted RBP19.47■□□□□ 0.71
TMPO-203ENST00000343315 GPT2Q8TD30 523 aa19.47■□□□□ 0.71
TMPO-203ENST00000343315 MINK1Q8N4C8 1332 aaPredicted RBP19.47■□□□□ 0.71
TMPO-203ENST00000343315 ATP2B3Q16720 1220 aa19.46■□□□□ 0.71
TMPO-203ENST00000343315 FMN2Q9NZ56 1722 aa19.46■□□□□ 0.71
TMPO-203ENST00000343315 PRPF40AO75400 957 aaKnown RBP19.46■□□□□ 0.71
TMPO-203ENST00000343315 GTF2F1P35269 517 aaKnown RBP eCLIP19.46■□□□□ 0.71
TMPO-203ENST00000343315 CCDC27Q2M243 656 aa19.46■□□□□ 0.71
TMPO-203ENST00000343315 CHD1LQ86WJ1 897 aa19.46■□□□□ 0.71
TMPO-203ENST00000343315 HMGN5P82970 282 aaKnown RBP19.45■□□□□ 0.7
TMPO-203ENST00000343315 SPATA31A6Q5VVP1 1343 aa19.45■□□□□ 0.7
TMPO-203ENST00000343315 FOXO3O43524 673 aa19.45■□□□□ 0.7
TMPO-203ENST00000343315 CARD14Q9BXL6 1004 aa19.45■□□□□ 0.7
TMPO-203ENST00000343315 SYCE3A1L190 88 aa19.44■□□□□ 0.7
TMPO-203ENST00000343315 PTMAP06454 111 aaKnown RBP19.44■□□□□ 0.7
TMPO-203ENST00000343315 SMC4Q9NTJ3 1288 aa19.44■□□□□ 0.7
TMPO-203ENST00000343315 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.44■□□□□ 0.7
TMPO-203ENST00000343315 SHPRHQ149N8 1683 aa19.44■□□□□ 0.7
TMPO-203ENST00000343315 TBC1D9Q6ZT07 1266 aa19.44■□□□□ 0.7
TMPO-203ENST00000343315 NPHP3Q7Z494 1330 aa19.43■□□□□ 0.7
TMPO-203ENST00000343315 NUTM2BA6NNL0 878 aaPredicted RBP19.43■□□□□ 0.7
TMPO-203ENST00000343315 NUTM2EB1AL46 878 aaPredicted RBP19.43■□□□□ 0.7
TMPO-203ENST00000343315 NUTM2AQ8IVF1 878 aaPredicted RBP19.43■□□□□ 0.7
TMPO-203ENST00000343315 ARHGEF28Q8N1W1 1705 aaKnown RBP19.43■□□□□ 0.7
TMPO-203ENST00000343315 ZBTB7CA1YPR0 619 aa19.43■□□□□ 0.7
TMPO-203ENST00000343315 PKP1Q13835 747 aa19.43■□□□□ 0.7
TMPO-203ENST00000343315 ZBTB40Q9NUA8 1239 aa19.43■□□□□ 0.7
TMPO-203ENST00000343315 TMEM63CQ9P1W3 806 aa19.43■□□□□ 0.7
TMPO-203ENST00000343315 SOS2Q07890 1332 aaPredicted RBP19.42■□□□□ 0.7
TMPO-203ENST00000343315 MEX3CQ5U5Q3 659 aaKnown RBP19.42■□□□□ 0.7
TMPO-203ENST00000343315 CT47B1P0C2W7 299 aaPredicted RBP19.42■□□□□ 0.7
TMPO-203ENST00000343315 ATF7IPQ6VMQ6 1270 aa19.42■□□□□ 0.7
TMPO-203ENST00000343315 RNF214Q8ND24 703 aa19.41■□□□□ 0.7
TMPO-203ENST00000343315 TMEM51Q9NW97 253 aa19.4■□□□□ 0.7
TMPO-203ENST00000343315 ADGRB2O60241 1585 aa19.4■□□□□ 0.7
TMPO-203ENST00000343315 RGPD8O14715 1765 aaPredicted RBP19.4■□□□□ 0.7
TMPO-203ENST00000343315 LRP6O75581 1613 aa19.4■□□□□ 0.7
TMPO-203ENST00000343315 TMEM57Q8N5G2 664 aa19.4■□□□□ 0.7
TMPO-203ENST00000343315 BCL11BQ9C0K0 894 aaPredicted RBP19.4■□□□□ 0.7
TMPO-203ENST00000343315 KIF3AQ9Y496 699 aa19.4■□□□□ 0.7
TMPO-203ENST00000343315 NAP1L2Q9ULW6 460 aaPredicted RBP19.39■□□□□ 0.69
TMPO-203ENST00000343315 PNPLA6Q8IY17 1366 aa19.39■□□□□ 0.69
TMPO-203ENST00000343315 WASLO00401 505 aaPredicted RBP19.39■□□□□ 0.69
TMPO-203ENST00000343315 RABEP1Q15276 862 aa19.39■□□□□ 0.69
TMPO-203ENST00000343315 PIBF1Q8WXW3 757 aa19.39■□□□□ 0.69
TMPO-203ENST00000343315 RGS17Q9UGC6 210 aaPredicted RBP19.39■□□□□ 0.69
TMPO-203ENST00000343315 PHF8Q9UPP1 1060 aa19.39■□□□□ 0.69
TMPO-203ENST00000343315 TAF3Q5VWG9 929 aa19.38■□□□□ 0.69
TMPO-203ENST00000343315 SSH1Q8WYL5 1049 aa19.38■□□□□ 0.69
TMPO-203ENST00000343315 CWC22Q9HCG8 908 aaKnown RBP19.37■□□□□ 0.69
TMPO-203ENST00000343315 KIF1AQ12756 1690 aa19.37■□□□□ 0.69
TMPO-203ENST00000343315 NOLC1Q14978 699 aaKnown RBP eCLIP19.37■□□□□ 0.69
TMPO-203ENST00000343315 NOB1Q9ULX3 412 aaKnown RBP19.37■□□□□ 0.69
TMPO-203ENST00000343315 NSFL1CQ9UNZ2 370 aaKnown RBP19.37■□□□□ 0.69
TMPO-203ENST00000343315 SPDYE4A6NLX3 237 aa19.36■□□□□ 0.69
TMPO-203ENST00000343315 FAM177BA6PVY3 158 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms