RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 HOXC9P31274 260 aa6.23□□□□□ -1.41
VAV3-201ENST00000343258 SPDYE4A6NLX3 237 aa6.23□□□□□ -1.41
VAV3-201ENST00000343258 PPM1GO15355 546 aaPredicted RBP6.23□□□□□ -1.41
VAV3-201ENST00000343258 PDE4CQ08493 712 aa6.23□□□□□ -1.41
VAV3-201ENST00000343258 BARGINQ6ZT62 677 aa6.23□□□□□ -1.41
VAV3-201ENST00000343258 VSIG10Q8N0Z9 540 aa6.23□□□□□ -1.41
VAV3-201ENST00000343258 USHBP1Q8N6Y0 703 aa6.23□□□□□ -1.41
VAV3-201ENST00000343258 IP6K1Q92551 441 aa6.23□□□□□ -1.41
VAV3-201ENST00000343258 THSD7AQ9UPZ6 1657 aa6.23□□□□□ -1.41
VAV3-201ENST00000343258 AMPHP49418 695 aa6.22□□□□□ -1.41
VAV3-201ENST00000343258 USP54Q70EL1 1684 aa6.22□□□□□ -1.41
VAV3-201ENST00000343258 CARD10Q9BWT7 1032 aa6.22□□□□□ -1.41
VAV3-201ENST00000343258 CGNL1Q0VF96 1302 aa6.22□□□□□ -1.41
VAV3-201ENST00000343258 CCDC7Q96M83 1385 aa6.22□□□□□ -1.41
VAV3-201ENST00000343258 TRIM37O94972 964 aa6.21□□□□□ -1.41
VAV3-201ENST00000343258 NBPF6Q5VWK0 638 aa6.21□□□□□ -1.41
VAV3-201ENST00000343258 MARCH10Q8NA82 808 aaPredicted RBP6.21□□□□□ -1.41
VAV3-201ENST00000343258 NBPF4Q96M43 638 aa6.21□□□□□ -1.41
VAV3-201ENST00000343258 LTN1O94822 1766 aa6.21□□□□□ -1.41
VAV3-201ENST00000343258 PER1O15534 1290 aaPredicted RBP6.21□□□□□ -1.42
VAV3-201ENST00000343258 PDE3BQ13370 1112 aa6.21□□□□□ -1.42
VAV3-201ENST00000343258 AMER1Q5JTC6 1135 aaPredicted RBP6.21□□□□□ -1.42
VAV3-201ENST00000343258 POLKQ9UBT6 870 aa6.21□□□□□ -1.42
VAV3-201ENST00000343258 PEAK1Q9H792 1746 aa6.21□□□□□ -1.42
VAV3-201ENST00000343258 DISP2A7MBM2 1401 aa6.21□□□□□ -1.42
VAV3-201ENST00000343258 DDB1Q16531 1140 aa6.2□□□□□ -1.42
VAV3-201ENST00000343258 THRAP3Q9Y2W1 955 aaKnown RBP6.2□□□□□ -1.42
VAV3-201ENST00000343258 EN1Q05925 392 aaPredicted RBP6.2□□□□□ -1.42
VAV3-201ENST00000343258 CC2D1BQ5T0F9 858 aaKnown RBP6.2□□□□□ -1.42
VAV3-201ENST00000343258 PDIA4P13667 645 aaKnown RBP6.19□□□□□ -1.42
VAV3-201ENST00000343258 KNSTRNQ9Y448 316 aa6.19□□□□□ -1.42
VAV3-201ENST00000343258 GOLGB1Q14789 3259 aaKnown RBP6.19□□□□□ -1.42
VAV3-201ENST00000343258 BLMP54132 1417 aaPredicted RBP6.19□□□□□ -1.42
VAV3-201ENST00000343258 KCNQ2O43526 872 aa6.19□□□□□ -1.42
VAV3-201ENST00000343258 FGD1P98174 961 aa6.19□□□□□ -1.42
VAV3-201ENST00000343258 KIF20BQ96Q89 1820 aa6.19□□□□□ -1.42
VAV3-201ENST00000343258 LRRC37A3O60309 1634 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 MEGF6O75095 1541 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 FLT4P35916 1363 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 IL2RBP14784 551 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 FAM196AQ6ZSG2 479 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 MORC1Q86VD1 984 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 ACSBG1Q96GR2 724 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 UTRNP46939 3433 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 RGPD2P0DJD1 1756 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 ABCC6O95255 1503 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 INSRP06213 1382 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 EXOC5O00471 708 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 EZH2Q15910 746 aaKnown RBP6.18□□□□□ -1.42
VAV3-201ENST00000343258 RTL5Q5HYW3 569 aaPredicted RBP6.18□□□□□ -1.42
VAV3-201ENST00000343258 DDX54Q8TDD1 881 aaKnown RBP6.18□□□□□ -1.42
VAV3-201ENST00000343258 RTL1A6NKG5 1358 aa6.18□□□□□ -1.42
VAV3-201ENST00000343258 APBA3O96018 575 aa6.17□□□□□ -1.42
VAV3-201ENST00000343258 EIF4A2Q14240 407 aaKnown RBP6.17□□□□□ -1.42
VAV3-201ENST00000343258 EYA1Q99502 592 aa6.17□□□□□ -1.42
VAV3-201ENST00000343258 PARP4Q9UKK3 1724 aaKnown RBP6.17□□□□□ -1.42
VAV3-201ENST00000343258 TNS2Q63HR2 1409 aa6.17□□□□□ -1.42
VAV3-201ENST00000343258 FAM208AQ9UK61 1670 aaKnown RBP6.17□□□□□ -1.42
VAV3-201ENST00000343258 SF3B2Q13435 895 aaKnown RBP6.16□□□□□ -1.42
VAV3-201ENST00000343258 CCDC125Q86Z20 511 aa6.16□□□□□ -1.42
VAV3-201ENST00000343258 AEBP1Q8IUX7 1158 aa6.16□□□□□ -1.42
VAV3-201ENST00000343258 OVOS2A0A0G2JMS6 1433 aa6.16□□□□□ -1.42
VAV3-201ENST00000343258 PSDA5PKW4 1024 aaPredicted RBP6.16□□□□□ -1.42
VAV3-201ENST00000343258 CAMKK2Q96RR4 588 aa6.16□□□□□ -1.42
VAV3-201ENST00000343258 CDCA7Q9BWT1 371 aaPredicted RBP6.16□□□□□ -1.42
VAV3-201ENST00000343258 BCL11BQ9C0K0 894 aaPredicted RBP6.16□□□□□ -1.42
VAV3-201ENST00000343258 MTHFSP49914 203 aa6.15□□□□□ -1.42
VAV3-201ENST00000343258 RBM10P98175 930 aaKnown RBP6.15□□□□□ -1.42
VAV3-201ENST00000343258 PROM2Q8N271 834 aa6.15□□□□□ -1.42
VAV3-201ENST00000343258 MAP2P11137 1827 aaKnown RBP6.15□□□□□ -1.42
VAV3-201ENST00000343258 WNK3Q9BYP7 1800 aa6.15□□□□□ -1.42
VAV3-201ENST00000343258 CYP27B1O15528 508 aa6.15□□□□□ -1.42
VAV3-201ENST00000343258 BAG6P46379 1132 aa6.15□□□□□ -1.42
VAV3-201ENST00000343258 ZCRB1Q8TBF4 217 aaKnown RBP6.15□□□□□ -1.42
VAV3-201ENST00000343258 NSD2O96028 1365 aa6.15□□□□□ -1.43
VAV3-201ENST00000343258 KCNQ4P56696 695 aa6.14□□□□□ -1.43
VAV3-201ENST00000343258 AAMPQ13685 434 aa6.14□□□□□ -1.43
VAV3-201ENST00000343258 SP7Q8TDD2 431 aaPredicted RBP6.14□□□□□ -1.43
VAV3-201ENST00000343258 RAPGEF4Q8WZA2 1011 aa6.14□□□□□ -1.43
VAV3-201ENST00000343258 TNS1Q9HBL0 1735 aaKnown RBP6.14□□□□□ -1.43
VAV3-201ENST00000343258 KIF24Q5T7B8 1368 aa6.14□□□□□ -1.43
VAV3-201ENST00000343258 SMG6Q86US8 1419 aaKnown RBP6.14□□□□□ -1.43
VAV3-201ENST00000343258 DDX10Q13206 875 aaKnown RBP6.14□□□□□ -1.43
VAV3-201ENST00000343258 NOP58Q9Y2X3 529 aaKnown RBP6.14□□□□□ -1.43
VAV3-201ENST00000343258 ANKRD26Q9UPS8 1709 aa6.14□□□□□ -1.43
VAV3-201ENST00000343258 IL13P35225 146 aa6.13□□□□□ -1.43
VAV3-201ENST00000343258 PRIM1P49642 420 aaKnown RBP6.13□□□□□ -1.43
VAV3-201ENST00000343258 R3HDM1Q15032 1099 aaKnown RBP6.13□□□□□ -1.43
VAV3-201ENST00000343258 KLHL34Q8N239 644 aa6.13□□□□□ -1.43
VAV3-201ENST00000343258 SYTL4Q96C24 671 aaPredicted RBP6.13□□□□□ -1.43
VAV3-201ENST00000343258 KAT6BQ8WYB5 2073 aa6.13□□□□□ -1.43
VAV3-201ENST00000343258 IGSF1Q8N6C5 1336 aa6.13□□□□□ -1.43
VAV3-201ENST00000343258 NCAPD2Q15021 1401 aa6.13□□□□□ -1.43
VAV3-201ENST00000343258 HMOX1P09601 288 aa6.13□□□□□ -1.43
VAV3-201ENST00000343258 TATP17735 454 aaPredicted RBP6.13□□□□□ -1.43
VAV3-201ENST00000343258 PDGFDQ9GZP0 370 aaPredicted RBP6.13□□□□□ -1.43
VAV3-201ENST00000343258 RSPH6AQ9H0K4 717 aa6.13□□□□□ -1.43
VAV3-201ENST00000343258 SULT6B1Q6IMI4 303 aa6.12□□□□□ -1.43
VAV3-201ENST00000343258 ZBTB12Q9Y330 459 aaPredicted RBP6.12□□□□□ -1.43
VAV3-201ENST00000343258 SHANK3Q9BYB0 1731 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms