RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
CLCN1-201ENST00000343257 ARHGAP45Q92619 1136 aa18.01■□□□□ 0.47
CLCN1-201ENST00000343257 ARHGAP31Q2M1Z3 1444 aa18.01■□□□□ 0.47
CLCN1-201ENST00000343257 GNAI1P63096 354 aa18.01■□□□□ 0.47
CLCN1-201ENST00000343257 SLC4A10Q6U841 1118 aa18.01■□□□□ 0.47
CLCN1-201ENST00000343257 MED14O60244 1454 aa18.01■□□□□ 0.47
CLCN1-201ENST00000343257 FCHSD2O94868 740 aa18.01■□□□□ 0.47
CLCN1-201ENST00000343257 NFE2L2Q16236 605 aa18.01■□□□□ 0.47
CLCN1-201ENST00000343257 GIMAP6Q6P9H5 292 aa18.01■□□□□ 0.47
CLCN1-201ENST00000343257 BBXQ8WY36 941 aaPredicted RBP18.01■□□□□ 0.47
CLCN1-201ENST00000343257 CHMP3Q9Y3E7 222 aa18.01■□□□□ 0.47
CLCN1-201ENST00000343257 ADGRL1O94910 1474 aa18■□□□□ 0.47
CLCN1-201ENST00000343257 FIBPO43427 364 aa18■□□□□ 0.47
CLCN1-201ENST00000343257 CEP85Q6P2H3 762 aa18■□□□□ 0.47
CLCN1-201ENST00000343257 EXOC6BQ9Y2D4 811 aa17.99■□□□□ 0.47
CLCN1-201ENST00000343257 FGD1P98174 961 aa17.99■□□□□ 0.47
CLCN1-201ENST00000343257 ANKRD44Q8N8A2 993 aa17.99■□□□□ 0.47
CLCN1-201ENST00000343257 MYOM2P54296 1465 aa17.99■□□□□ 0.47
CLCN1-201ENST00000343257 ZNF771Q7L3S4 317 aaPredicted RBP17.99■□□□□ 0.47
CLCN1-201ENST00000343257 PHF14O94880 888 aa17.98■□□□□ 0.47
CLCN1-201ENST00000343257 EMILIN1Q9Y6C2 1016 aa17.98■□□□□ 0.47
CLCN1-201ENST00000343257 ZBTB22O15209 634 aa17.98■□□□□ 0.47
CLCN1-201ENST00000343257 CABP1Q9NZU7 370 aa17.97■□□□□ 0.47
CLCN1-201ENST00000343257 NSD2O96028 1365 aa17.97■□□□□ 0.47
CLCN1-201ENST00000343257 AP5Z1O43299 807 aa17.97■□□□□ 0.47
CLCN1-201ENST00000343257 MAPK8IP2Q13387 824 aaPredicted RBP17.97■□□□□ 0.47
CLCN1-201ENST00000343257 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.97■□□□□ 0.47
CLCN1-201ENST00000343257 CFAP44Q96MT7 982 aa17.97■□□□□ 0.47
CLCN1-201ENST00000343257 TERF2IPQ9NYB0 399 aa17.97■□□□□ 0.47
CLCN1-201ENST00000343257 CGNQ9P2M7 1197 aaKnown RBP17.97■□□□□ 0.47
CLCN1-201ENST00000343257 QRICH2Q9H0J4 1663 aa17.97■□□□□ 0.47
CLCN1-201ENST00000343257 CHAF1AQ13111 956 aaPredicted RBP17.97■□□□□ 0.47
CLCN1-201ENST00000343257 FKBP5Q13451 457 aaPredicted RBP17.97■□□□□ 0.47
CLCN1-201ENST00000343257 NAA30Q147X3 362 aaPredicted RBP17.97■□□□□ 0.47
CLCN1-201ENST00000343257 GTPBP4Q9BZE4 634 aaKnown RBP17.97■□□□□ 0.47
CLCN1-201ENST00000343257 SRCIN1Q9C0H9 1055 aa17.96■□□□□ 0.47
CLCN1-201ENST00000343257 PTCH1Q13635 1447 aa17.96■□□□□ 0.47
CLCN1-201ENST00000343257 BRPF1P55201 1214 aaPredicted RBP17.96■□□□□ 0.47
CLCN1-201ENST00000343257 MAP4K4O95819 1239 aaPredicted RBP17.95■□□□□ 0.46
CLCN1-201ENST00000343257 ZNF428Q96B54 188 aa17.95■□□□□ 0.46
CLCN1-201ENST00000343257 KIAA1210Q9ULL0 1709 aa17.95■□□□□ 0.46
CLCN1-201ENST00000343257 PDE1AP54750 535 aa17.95■□□□□ 0.46
CLCN1-201ENST00000343257 F6X3S4 739 aa17.95■□□□□ 0.46
CLCN1-201ENST00000343257 KCNF1Q9H3M0 494 aa17.95■□□□□ 0.46
CLCN1-201ENST00000343257 IFT57Q9NWB7 429 aa17.95■□□□□ 0.46
CLCN1-201ENST00000343257 POLKQ9UBT6 870 aa17.95■□□□□ 0.46
CLCN1-201ENST00000343257 CCDC183Q5T5S1 534 aa17.94■□□□□ 0.46
CLCN1-201ENST00000343257 KDM4AO75164 1064 aa17.94■□□□□ 0.46
CLCN1-201ENST00000343257 ZRANB1Q9UGI0 708 aa17.94■□□□□ 0.46
CLCN1-201ENST00000343257 PIK3R4Q99570 1358 aa17.94■□□□□ 0.46
CLCN1-201ENST00000343257 MCCP23508 829 aa17.93■□□□□ 0.46
CLCN1-201ENST00000343257 PRAM1Q96QH2 718 aa17.93■□□□□ 0.46
CLCN1-201ENST00000343257 MIS18AQ9NYP9 233 aa17.93■□□□□ 0.46
CLCN1-201ENST00000343257 COL3A1P02461 1466 aaPredicted RBP17.93■□□□□ 0.46
CLCN1-201ENST00000343257 GTF2F1P35269 517 aaKnown RBP eCLIP17.93■□□□□ 0.46
CLCN1-201ENST00000343257 HDGFL2Q7Z4V5 671 aaPredicted RBP17.93■□□□□ 0.46
CLCN1-201ENST00000343257 ESYT1Q9BSJ8 1104 aa17.93■□□□□ 0.46
CLCN1-201ENST00000343257 MROH2AA6NES4 1674 aa17.93■□□□□ 0.46
CLCN1-201ENST00000343257 MSH6P52701 1360 aa17.93■□□□□ 0.46
CLCN1-201ENST00000343257 VGLL3A8MV65 326 aa17.92■□□□□ 0.46
CLCN1-201ENST00000343257 RPAP2Q8IXW5 612 aaPredicted RBP17.92■□□□□ 0.46
CLCN1-201ENST00000343257 ABCC1P33527 1531 aa17.92■□□□□ 0.46
CLCN1-201ENST00000343257 TULP4Q9NRJ4 1543 aa17.92■□□□□ 0.46
CLCN1-201ENST00000343257 C16orf45Q96MC5 204 aaPredicted RBP17.92■□□□□ 0.46
CLCN1-201ENST00000343257 TET3O43151 1660 aa17.92■□□□□ 0.46
CLCN1-201ENST00000343257 LETM1O95202 739 aaPredicted RBP17.91■□□□□ 0.46
CLCN1-201ENST00000343257 CUL4AQ13619 759 aa17.91■□□□□ 0.46
CLCN1-201ENST00000343257 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
CLCN1-201ENST00000343257 MX1P20591 662 aa17.91■□□□□ 0.46
CLCN1-201ENST00000343257 PTGS1P23219 599 aa17.91■□□□□ 0.46
CLCN1-201ENST00000343257 UVSSAQ2YD98 709 aa17.91■□□□□ 0.46
CLCN1-201ENST00000343257 WDR33Q9C0J8 1336 aaKnown RBP17.91■□□□□ 0.46
CLCN1-201ENST00000343257 KIF20AO95235 890 aa17.91■□□□□ 0.46
CLCN1-201ENST00000343257 CPA1P15085 419 aa17.91■□□□□ 0.46
CLCN1-201ENST00000343257 KIAA1524Q8TCG1 905 aa17.91■□□□□ 0.46
CLCN1-201ENST00000343257 DIAPH3Q9NSV4 1193 aa17.91■□□□□ 0.46
CLCN1-201ENST00000343257 RRS1Q15050 365 aaKnown RBP17.9■□□□□ 0.46
CLCN1-201ENST00000343257 UNC5CLQ8IV45 518 aa17.9■□□□□ 0.46
CLCN1-201ENST00000343257 DRC7Q8IY82 874 aa17.9■□□□□ 0.46
CLCN1-201ENST00000343257 SPTLC3Q9NUV7 552 aa17.9■□□□□ 0.46
CLCN1-201ENST00000343257 DDX54Q8TDD1 881 aaKnown RBP17.9■□□□□ 0.46
CLCN1-201ENST00000343257 ZNF592Q92610 1267 aa17.9■□□□□ 0.46
CLCN1-201ENST00000343257 IL25Q9H293 177 aa17.9■□□□□ 0.46
CLCN1-201ENST00000343257 LRRC7Q96NW7 1537 aa17.9■□□□□ 0.46
CLCN1-201ENST00000343257 LRMPQ12912 555 aa17.89■□□□□ 0.46
CLCN1-201ENST00000343257 CAMK4Q16566 473 aa17.89■□□□□ 0.46
CLCN1-201ENST00000343257 MCM10Q7L590 875 aa17.89■□□□□ 0.46
CLCN1-201ENST00000343257 KIF1BO60333 1816 aa17.89■□□□□ 0.45
CLCN1-201ENST00000343257 ZFYVE16Q7Z3T8 1539 aa17.89■□□□□ 0.45
CLCN1-201ENST00000343257 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.89■□□□□ 0.45
CLCN1-201ENST00000343257 ZNF853P0CG23 659 aa17.89■□□□□ 0.45
CLCN1-201ENST00000343257 PPRC1Q5VV67 1664 aaKnown RBP17.89■□□□□ 0.45
CLCN1-201ENST00000343257 SLC4A2P04920 1241 aa17.88■□□□□ 0.45
CLCN1-201ENST00000343257 MCM2P49736 904 aa17.88■□□□□ 0.45
CLCN1-201ENST00000343257 RTL1A6NKG5 1358 aa17.88■□□□□ 0.45
CLCN1-201ENST00000343257 KNDC1Q76NI1 1749 aa17.88■□□□□ 0.45
CLCN1-201ENST00000343257 ERCC6L2Q5T890 1561 aa17.88■□□□□ 0.45
CLCN1-201ENST00000343257 GTF2E1P29083 439 aaPredicted RBP17.88■□□□□ 0.45
CLCN1-201ENST00000343257 NECTIN2Q92692 538 aa17.88■□□□□ 0.45
CLCN1-201ENST00000343257 ATP10DQ9P241 1426 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms