RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 PPP1R1BQ9UD71 204 aaPredicted RBP28.08■■■□□ 2.09
SDHC-201ENST00000342751 CASZ1Q86V15 1759 aa28.08■■■□□ 2.09
SDHC-201ENST00000342751 ZCRB1Q8TBF4 217 aaKnown RBP28.07■■■□□ 2.08
SDHC-201ENST00000342751 PDGFDQ9GZP0 370 aaPredicted RBP28.06■■■□□ 2.08
SDHC-201ENST00000342751 CGNL1Q0VF96 1302 aa28.06■■■□□ 2.08
SDHC-201ENST00000342751 INSRP06213 1382 aa28.05■■■□□ 2.08
SDHC-201ENST00000342751 DOT1LQ8TEK3 1739 aa28.05■■■□□ 2.08
SDHC-201ENST00000342751 RAPGEF4Q8WZA2 1011 aa28.05■■■□□ 2.08
SDHC-201ENST00000342751 SHANK3Q9BYB0 1731 aa28.05■■■□□ 2.08
SDHC-201ENST00000342751 ZBTB7AO95365 584 aa28.03■■■□□ 2.08
SDHC-201ENST00000342751 TATP17735 454 aaPredicted RBP28.02■■■□□ 2.08
SDHC-201ENST00000342751 TNNT2P45379 298 aaPredicted RBP28.02■■■□□ 2.08
SDHC-201ENST00000342751 PRIM1P49642 420 aaKnown RBP28.01■■■□□ 2.07
SDHC-201ENST00000342751 SLC15A2Q16348 729 aa28.01■■■□□ 2.07
SDHC-201ENST00000342751 KIF24Q5T7B8 1368 aa27.99■■■□□ 2.07
SDHC-201ENST00000342751 PANK3Q9H999 370 aa27.97■■■□□ 2.07
SDHC-201ENST00000342751 ATF5Q9Y2D1 282 aaPredicted RBP27.97■■■□□ 2.07
SDHC-201ENST00000342751 PAPPAQ13219 1627 aa27.96■■■□□ 2.07
SDHC-201ENST00000342751 KCNQ4P56696 695 aa27.95■■■□□ 2.06
SDHC-201ENST00000342751 LRRC4BQ9NT99 713 aa27.95■■■□□ 2.06
SDHC-201ENST00000342751 MAP2P11137 1827 aaKnown RBP27.95■■■□□ 2.06
SDHC-201ENST00000342751 ZNF827Q17R98 1081 aa27.94■■■□□ 2.06
SDHC-201ENST00000342751 ANKRD26Q9UPS8 1709 aa27.94■■■□□ 2.06
SDHC-201ENST00000342751 NSD2O96028 1365 aa27.93■■■□□ 2.06
SDHC-201ENST00000342751 PCDH11XQ9BZA7 1347 aa27.92■■■□□ 2.06
SDHC-201ENST00000342751 PCDH11YQ9BZA8 1340 aa27.92■■■□□ 2.06
SDHC-201ENST00000342751 POLKQ9UBT6 870 aa27.91■■■□□ 2.06
SDHC-201ENST00000342751 WASHC2AQ641Q2 1341 aa27.9■■■□□ 2.06
SDHC-201ENST00000342751 PTGER2P43116 358 aa27.88■■■□□ 2.05
SDHC-201ENST00000342751 SLC27A3Q5K4L6 730 aa27.88■■■□□ 2.05
SDHC-201ENST00000342751 EYA1Q99502 592 aa27.87■■■□□ 2.05
SDHC-201ENST00000342751 CYP27B1O15528 508 aa27.85■■■□□ 2.05
SDHC-201ENST00000342751 MTFR1LQ9H019 292 aa27.85■■■□□ 2.05
SDHC-201ENST00000342751 CCNL1Q9UK58 526 aaPredicted RBP27.85■■■□□ 2.05
SDHC-201ENST00000342751 PKD1L3Q7Z443 1732 aa27.84■■■□□ 2.05
SDHC-201ENST00000342751 DCAF8L1A6NGE4 600 aa27.84■■■□□ 2.05
SDHC-201ENST00000342751 EIF4A2Q14240 407 aaKnown RBP27.84■■■□□ 2.05
SDHC-201ENST00000342751 MPRIPQ6WCQ1 1025 aa27.84■■■□□ 2.05
SDHC-201ENST00000342751 LY75O60449 1722 aa27.84■■■□□ 2.05
SDHC-201ENST00000342751 MORC1Q86VD1 984 aa27.83■■■□□ 2.05
SDHC-201ENST00000342751 AKT1S1Q96B36 256 aa27.83■■■□□ 2.05
SDHC-201ENST00000342751 TFCP2L1Q9NZI6 479 aa27.82■■■□□ 2.04
SDHC-201ENST00000342751 SPG7Q9UQ90 795 aa27.82■■■□□ 2.04
SDHC-201ENST00000342751 NCAPD2Q15021 1401 aa27.82■■■□□ 2.04
SDHC-201ENST00000342751 TOGARAM1Q9Y4F4 1720 aa27.81■■■□□ 2.04
SDHC-201ENST00000342751 KNSTRNQ9Y448 316 aa27.8■■■□□ 2.04
SDHC-201ENST00000342751 TUBGCP6Q96RT7 1819 aa27.79■■■□□ 2.04
SDHC-201ENST00000342751 KIF7Q2M1P5 1343 aa27.79■■■□□ 2.04
SDHC-201ENST00000342751 QSER1Q2KHR3 1735 aa27.78■■■□□ 2.04
SDHC-201ENST00000342751 PNPLA7Q6ZV29 1317 aa27.78■■■□□ 2.04
SDHC-201ENST00000342751 SGIP1Q9BQI5 828 aa27.78■■■□□ 2.04
SDHC-201ENST00000342751 PALLDQ8WX93 1383 aa27.77■■■□□ 2.04
SDHC-201ENST00000342751 MSH5O43196 834 aa27.77■■■□□ 2.04
SDHC-201ENST00000342751 YY1P25490 414 aa27.77■■■□□ 2.04
SDHC-201ENST00000342751 FHDC1Q9C0D6 1143 aaPredicted RBP27.76■■■□□ 2.03
SDHC-201ENST00000342751 ITGB4P16144 1822 aa27.76■■■□□ 2.03
SDHC-201ENST00000342751 KLHL34Q8N239 644 aa27.75■■■□□ 2.03
SDHC-201ENST00000342751 ARXQ96QS3 562 aa27.73■■■□□ 2.03
SDHC-201ENST00000342751 SYT17Q9BSW7 474 aa27.73■■■□□ 2.03
SDHC-201ENST00000342751 C5P01031 1676 aa27.72■■■□□ 2.03
SDHC-201ENST00000342751 IGSF1Q8N6C5 1336 aa27.71■■■□□ 2.03
SDHC-201ENST00000342751 PIGBQ92521 554 aa27.71■■■□□ 2.03
SDHC-201ENST00000342751 PHKG2P15735 406 aa27.7■■■□□ 2.02
SDHC-201ENST00000342751 CNGB1Q14028 1251 aaPredicted RBP27.7■■■□□ 2.02
SDHC-201ENST00000342751 IFNL2Q8IZJ0 200 aa27.7■■■□□ 2.02
SDHC-201ENST00000342751 POLD1P28340 1107 aa27.69■■■□□ 2.02
SDHC-201ENST00000342751 NKX1-1Q15270 411 aaPredicted RBP27.69■■■□□ 2.02
SDHC-201ENST00000342751 SLC16A10Q8TF71 515 aa27.69■■■□□ 2.02
SDHC-201ENST00000342751 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.69■■■□□ 2.02
SDHC-201ENST00000342751 TMOD3Q9NYL9 352 aa27.69■■■□□ 2.02
SDHC-201ENST00000342751 SMARCC1Q92922 1105 aaPredicted RBP27.68■■■□□ 2.02
SDHC-201ENST00000342751 AEBP1Q8IUX7 1158 aa27.67■■■□□ 2.02
SDHC-201ENST00000342751 AMER1Q5JTC6 1135 aaPredicted RBP27.66■■■□□ 2.02
SDHC-201ENST00000342751 COL23A1Q86Y22 540 aaPredicted RBP27.66■■■□□ 2.02
SDHC-201ENST00000342751 COL24A1Q17RW2 1714 aa27.65■■■□□ 2.02
SDHC-201ENST00000342751 CC2D1BQ5T0F9 858 aaKnown RBP27.65■■■□□ 2.02
SDHC-201ENST00000342751 MSL1Q68DK7 614 aa27.65■■■□□ 2.02
SDHC-201ENST00000342751 TAF1LQ8IZX4 1826 aa27.64■■■□□ 2.01
SDHC-201ENST00000342751 MAP3K5Q99683 1374 aa27.63■■■□□ 2.01
SDHC-201ENST00000342751 PLEKHO1Q53GL0 409 aaPredicted RBP27.63■■■□□ 2.01
SDHC-201ENST00000342751 ZNF530Q6P9A1 599 aaPredicted RBP27.63■■■□□ 2.01
SDHC-201ENST00000342751 AK7Q96M32 723 aa27.63■■■□□ 2.01
SDHC-201ENST00000342751 ASAP1Q9ULH1 1129 aa27.63■■■□□ 2.01
SDHC-201ENST00000342751 C4BP0C0L5 1744 aa27.62■■■□□ 2.01
SDHC-201ENST00000342751 PHF14O94880 888 aa27.61■■■□□ 2.01
SDHC-201ENST00000342751 SULT6B1Q6IMI4 303 aa27.61■■■□□ 2.01
SDHC-201ENST00000342751 SMIM5Q71RC9 77 aa27.6■■■□□ 2.01
SDHC-201ENST00000342751 LOC102724428A0A0B4J2F2 783 aa27.59■■■□□ 2.01
SDHC-201ENST00000342751 SIK1P57059 783 aa27.59■■■□□ 2.01
SDHC-201ENST00000342751 IL13P35225 146 aa27.57■■■□□ 2
SDHC-201ENST00000342751 MTHFSP49914 203 aa27.57■■■□□ 2
SDHC-201ENST00000342751 PELP1Q8IZL8 1130 aaKnown RBP27.57■■■□□ 2
SDHC-201ENST00000342751 LINC00116Q8NCU8 138 aa27.57■■■□□ 2
SDHC-201ENST00000342751 ATP6V1AP38606 617 aa27.56■■■□□ 2
SDHC-201ENST00000342751 AMOTQ4VCS5 1084 aa27.56■■■□□ 2
SDHC-201ENST00000342751 C1orf141Q5JVX7 400 aa27.56■■■□□ 2
SDHC-201ENST00000342751 AMIGO3Q86WK7 504 aa27.56■■■□□ 2
SDHC-201ENST00000342751 ATG3Q9NT62 314 aa27.56■■■□□ 2
SDHC-201ENST00000342751 PLEKHG2Q9H7P9 1386 aa27.56■■■□□ 2
SDHC-201ENST00000342751 HSP90AB1P08238 724 aaKnown RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms