RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 SLC27A3Q5K4L6 730 aa14.07□□□□□ -0.16
SNRPD2-201ENST00000342669 LRRC4BQ9NT99 713 aa14.07□□□□□ -0.16
SNRPD2-201ENST00000342669 SMG6Q86US8 1419 aaKnown RBP14.07□□□□□ -0.16
SNRPD2-201ENST00000342669 PRIM1P49642 420 aaKnown RBP14.06□□□□□ -0.16
SNRPD2-201ENST00000342669 ZNF827Q17R98 1081 aa14.06□□□□□ -0.16
SNRPD2-201ENST00000342669 QSER1Q2KHR3 1735 aa14.06□□□□□ -0.16
SNRPD2-201ENST00000342669 MEGF6O75095 1541 aa14.05□□□□□ -0.16
SNRPD2-201ENST00000342669 NBPF6Q5VWK0 638 aa14.05□□□□□ -0.16
SNRPD2-201ENST00000342669 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
SNRPD2-201ENST00000342669 NBPF4Q96M43 638 aa14.05□□□□□ -0.16
SNRPD2-201ENST00000342669 SYT17Q9BSW7 474 aa14.05□□□□□ -0.16
SNRPD2-201ENST00000342669 FHDC1Q9C0D6 1143 aaPredicted RBP14.05□□□□□ -0.16
SNRPD2-201ENST00000342669 CGNL1Q0VF96 1302 aa14.05□□□□□ -0.16
SNRPD2-201ENST00000342669 LY75O60449 1722 aa14.04□□□□□ -0.16
SNRPD2-201ENST00000342669 UTRNP46939 3433 aa14.04□□□□□ -0.16
SNRPD2-201ENST00000342669 USHBP1Q8N6Y0 703 aa14.04□□□□□ -0.16
SNRPD2-201ENST00000342669 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
SNRPD2-201ENST00000342669 ARXQ96QS3 562 aa14.04□□□□□ -0.16
SNRPD2-201ENST00000342669 SGIP1Q9BQI5 828 aa14.04□□□□□ -0.16
SNRPD2-201ENST00000342669 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
SNRPD2-201ENST00000342669 CHD4Q14839 1912 aa14.02□□□□□ -0.16
SNRPD2-201ENST00000342669 TUBGCP6Q96RT7 1819 aa14.02□□□□□ -0.16
SNRPD2-201ENST00000342669 INSRP06213 1382 aa14.02□□□□□ -0.17
SNRPD2-201ENST00000342669 FLT4P35916 1363 aa14.02□□□□□ -0.17
SNRPD2-201ENST00000342669 KIF24Q5T7B8 1368 aa14.02□□□□□ -0.17
SNRPD2-201ENST00000342669 TATP17735 454 aaPredicted RBP14.02□□□□□ -0.17
SNRPD2-201ENST00000342669 HSP90AB2PQ58FF8 381 aa14.02□□□□□ -0.17
SNRPD2-201ENST00000342669 SLC16A10Q8TF71 515 aa14.02□□□□□ -0.17
SNRPD2-201ENST00000342669 TFCP2L1Q9NZI6 479 aa14.02□□□□□ -0.17
SNRPD2-201ENST00000342669 NSD2O96028 1365 aa14.01□□□□□ -0.17
SNRPD2-201ENST00000342669 MAP2P11137 1827 aaKnown RBP14□□□□□ -0.17
SNRPD2-201ENST00000342669 POLD1P28340 1107 aa14□□□□□ -0.17
SNRPD2-201ENST00000342669 KCNQ4P56696 695 aa14□□□□□ -0.17
SNRPD2-201ENST00000342669 CARD14Q9BXL6 1004 aa14□□□□□ -0.17
SNRPD2-201ENST00000342669 CCNL1Q9UK58 526 aaPredicted RBP14□□□□□ -0.17
SNRPD2-201ENST00000342669 NSD3Q9BZ95 1437 aa13.99□□□□□ -0.17
SNRPD2-201ENST00000342669 MAP3K5Q99683 1374 aa13.99□□□□□ -0.17
SNRPD2-201ENST00000342669 PNPLA7Q6ZV29 1317 aa13.99□□□□□ -0.17
SNRPD2-201ENST00000342669 PCDH11XQ9BZA7 1347 aa13.99□□□□□ -0.17
SNRPD2-201ENST00000342669 PCDH11YQ9BZA8 1340 aa13.99□□□□□ -0.17
SNRPD2-201ENST00000342669 COL24A1Q17RW2 1714 aa13.98□□□□□ -0.17
SNRPD2-201ENST00000342669 ITGB4P16144 1822 aa13.97□□□□□ -0.17
SNRPD2-201ENST00000342669 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
SNRPD2-201ENST00000342669 PPM1GO15355 546 aaPredicted RBP13.97□□□□□ -0.17
SNRPD2-201ENST00000342669 HMGB2P26583 209 aaKnown RBP13.97□□□□□ -0.17
SNRPD2-201ENST00000342669 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
SNRPD2-201ENST00000342669 PCGF6Q9BYE7 350 aa13.97□□□□□ -0.17
SNRPD2-201ENST00000342669 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
SNRPD2-201ENST00000342669 GOLGB1Q14789 3259 aaKnown RBP13.96□□□□□ -0.17
SNRPD2-201ENST00000342669 POLR3GLQ9BT43 218 aa13.96□□□□□ -0.17
SNRPD2-201ENST00000342669 PKD1L3Q7Z443 1732 aa13.95□□□□□ -0.18
SNRPD2-201ENST00000342669 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
SNRPD2-201ENST00000342669 C5P01031 1676 aa13.95□□□□□ -0.18
SNRPD2-201ENST00000342669 TAF1LQ8IZX4 1826 aa13.95□□□□□ -0.18
SNRPD2-201ENST00000342669 MPRIPQ6WCQ1 1025 aa13.95□□□□□ -0.18
SNRPD2-201ENST00000342669 CYP27B1O15528 508 aa13.94□□□□□ -0.18
SNRPD2-201ENST00000342669 GPR162Q16538 588 aa13.94□□□□□ -0.18
SNRPD2-201ENST00000342669 WASHC2AQ641Q2 1341 aa13.93□□□□□ -0.18
SNRPD2-201ENST00000342669 COL23A1Q86Y22 540 aaPredicted RBP13.93□□□□□ -0.18
SNRPD2-201ENST00000342669 SMARCC1Q92922 1105 aaPredicted RBP13.93□□□□□ -0.18
SNRPD2-201ENST00000342669 SPG7Q9UQ90 795 aa13.93□□□□□ -0.18
SNRPD2-201ENST00000342669 PALLDQ8WX93 1383 aa13.93□□□□□ -0.18
SNRPD2-201ENST00000342669 TOGARAM1Q9Y4F4 1720 aa13.93□□□□□ -0.18
SNRPD2-201ENST00000342669 ZNF784Q8NCA9 323 aaPredicted RBP13.92□□□□□ -0.18
SNRPD2-201ENST00000342669 NCAPD2Q15021 1401 aa13.91□□□□□ -0.18
SNRPD2-201ENST00000342669 PELP1Q8IZL8 1130 aaKnown RBP13.91□□□□□ -0.18
SNRPD2-201ENST00000342669 FLAD1Q8NFF5 587 aa13.91□□□□□ -0.18
SNRPD2-201ENST00000342669 EYA1Q99502 592 aa13.91□□□□□ -0.18
SNRPD2-201ENST00000342669 EIF4G2P78344 907 aaKnown RBP eCLIP13.9□□□□□ -0.18
SNRPD2-201ENST00000342669 NKX1-1Q15270 411 aaPredicted RBP13.9□□□□□ -0.18
SNRPD2-201ENST00000342669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.9□□□□□ -0.185e-8■□□□□ 9.2
SNRPD2-201ENST00000342669 POLKQ9UBT6 870 aa13.9□□□□□ -0.18
SNRPD2-201ENST00000342669 TNNT2P45379 298 aaPredicted RBP13.89□□□□□ -0.19
SNRPD2-201ENST00000342669 PIGBQ92521 554 aa13.89□□□□□ -0.19
SNRPD2-201ENST00000342669 AK7Q96M32 723 aa13.89□□□□□ -0.19
SNRPD2-201ENST00000342669 C4BP0C0L5 1744 aa13.89□□□□□ -0.19
SNRPD2-201ENST00000342669 MSL1Q68DK7 614 aa13.88□□□□□ -0.19
SNRPD2-201ENST00000342669 IFNL2Q8IZJ0 200 aa13.88□□□□□ -0.19
SNRPD2-201ENST00000342669 NLGN2Q8NFZ4 835 aa13.88□□□□□ -0.19
SNRPD2-201ENST00000342669 UBR3Q6ZT12 1888 aa13.88□□□□□ -0.19
SNRPD2-201ENST00000342669 HSPA5P11021 654 aaKnown RBP13.87□□□□□ -0.19
SNRPD2-201ENST00000342669 EIF4A2Q14240 407 aaKnown RBP13.87□□□□□ -0.19
SNRPD2-201ENST00000342669 TMOD3Q9NYL9 352 aa13.87□□□□□ -0.19
SNRPD2-201ENST00000342669 PHKG2P15735 406 aa13.86□□□□□ -0.19
SNRPD2-201ENST00000342669 PANK3Q9H999 370 aa13.86□□□□□ -0.19
SNRPD2-201ENST00000342669 LOC102724428A0A0B4J2F2 783 aa13.85□□□□□ -0.19
SNRPD2-201ENST00000342669 GRIN3BO60391 1043 aa13.85□□□□□ -0.19
SNRPD2-201ENST00000342669 SIK1P57059 783 aa13.85□□□□□ -0.19
SNRPD2-201ENST00000342669 CD2APQ9Y5K6 639 aa13.85□□□□□ -0.19
SNRPD2-201ENST00000342669 PHF14O94880 888 aa13.84□□□□□ -0.19
SNRPD2-201ENST00000342669 CCER1Q8TC90 406 aaPredicted RBP13.84□□□□□ -0.19
SNRPD2-201ENST00000342669 ASAP1Q9ULH1 1129 aa13.84□□□□□ -0.19
SNRPD2-201ENST00000342669 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.19
SNRPD2-201ENST00000342669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.83□□□□□ -0.2
SNRPD2-201ENST00000342669 LINC00116Q8NCU8 138 aa13.83□□□□□ -0.2
SNRPD2-201ENST00000342669 HSP90AB1P08238 724 aaKnown RBP13.82□□□□□ -0.2
SNRPD2-201ENST00000342669 YBX3P16989 372 aaKnown RBP eCLIP13.82□□□□□ -0.28e-21■■■□□ 16
SNRPD2-201ENST00000342669 SSFA2P28290 1259 aa13.82□□□□□ -0.2
SNRPD2-201ENST00000342669 ATP6V1AP38606 617 aa13.82□□□□□ -0.2
SNRPD2-201ENST00000342669 AMIGO3Q86WK7 504 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms