RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 SPATA31A1Q5TZJ5 1347 aa21.48■■□□□ 1.03
SNED1-202ENST00000342631 SPATA31A5Q5VU36 1347 aa21.48■■□□□ 1.03
SNED1-202ENST00000342631 SPATA31A7Q8IWB4 1347 aa21.48■■□□□ 1.03
SNED1-202ENST00000342631 OVOS2A0A0G2JMS6 1433 aa21.48■■□□□ 1.03
SNED1-202ENST00000342631 MEGF6O75095 1541 aa21.47■■□□□ 1.03
SNED1-202ENST00000342631 MTHFSDQ2M296 383 aaKnown RBP21.47■■□□□ 1.03
SNED1-202ENST00000342631 CDCA7Q9BWT1 371 aaPredicted RBP21.47■■□□□ 1.03
SNED1-202ENST00000342631 DLG5Q8TDM6 1919 aa21.47■■□□□ 1.03
SNED1-202ENST00000342631 HTATSF1O43719 755 aaKnown RBP21.47■■□□□ 1.03
SNED1-202ENST00000342631 PDE3BQ13370 1112 aa21.47■■□□□ 1.03
SNED1-202ENST00000342631 NEUROD2Q15784 382 aa21.47■■□□□ 1.03
SNED1-202ENST00000342631 SPG7Q9UQ90 795 aa21.47■■□□□ 1.03
SNED1-202ENST00000342631 RRP7AQ9Y3A4 280 aaKnown RBP21.47■■□□□ 1.03
SNED1-202ENST00000342631 ZNF521Q96K83 1311 aa21.47■■□□□ 1.03
SNED1-202ENST00000342631 PKD1L3Q7Z443 1732 aa21.46■■□□□ 1.03
SNED1-202ENST00000342631 AFF2P51816 1311 aa21.46■■□□□ 1.03
SNED1-202ENST00000342631 WWC1Q8IX03 1113 aa21.45■■□□□ 1.02
SNED1-202ENST00000342631 SALL2Q9Y467 1007 aaPredicted RBP21.45■■□□□ 1.02
SNED1-202ENST00000342631 WNK3Q9BYP7 1800 aa21.44■■□□□ 1.02
SNED1-202ENST00000342631 DISP2A7MBM2 1401 aa21.44■■□□□ 1.02
SNED1-202ENST00000342631 BARGINQ6ZT62 677 aa21.44■■□□□ 1.02
SNED1-202ENST00000342631 WDR63Q8IWG1 891 aa21.44■■□□□ 1.02
SNED1-202ENST00000342631 USP35Q9P2H5 1018 aa21.44■■□□□ 1.02
SNED1-202ENST00000342631 TRIM35Q9UPQ4 493 aa21.44■■□□□ 1.02
SNED1-202ENST00000342631 CALD1Q05682 793 aaKnown RBP21.43■■□□□ 1.02
SNED1-202ENST00000342631 MAP3K5Q99683 1374 aa21.42■■□□□ 1.02
SNED1-202ENST00000342631 SENP3-EIF4A1A0A087X0R7 540 aa21.42■■□□□ 1.02
SNED1-202ENST00000342631 GNAT3A8MTJ3 354 aa21.42■■□□□ 1.02
SNED1-202ENST00000342631 AKAP4Q5JQC9 854 aa21.42■■□□□ 1.02
SNED1-202ENST00000342631 CCDC9Q9Y3X0 531 aaKnown RBP21.42■■□□□ 1.02
SNED1-202ENST00000342631 C1orf141Q5JVX7 400 aa21.41■■□□□ 1.02
SNED1-202ENST00000342631 ZNF530Q6P9A1 599 aaPredicted RBP21.41■■□□□ 1.02
SNED1-202ENST00000342631 RTF1Q92541 710 aaKnown RBP21.41■■□□□ 1.02
SNED1-202ENST00000342631 TRPC5Q9UL62 973 aaPredicted RBP21.41■■□□□ 1.02
SNED1-202ENST00000342631 GOLGA2Q08379 1002 aa21.41■■□□□ 1.02
SNED1-202ENST00000342631 ZCRB1Q8TBF4 217 aaKnown RBP21.41■■□□□ 1.02
SNED1-202ENST00000342631 ATRNO75882 1429 aa21.41■■□□□ 1.02
SNED1-202ENST00000342631 IL16Q14005 1332 aa21.4■■□□□ 1.02
SNED1-202ENST00000342631 PCDH11XQ9BZA7 1347 aa21.39■■□□□ 1.01
SNED1-202ENST00000342631 PCDH11YQ9BZA8 1340 aa21.39■■□□□ 1.01
SNED1-202ENST00000342631 CENPBP07199 599 aaPredicted RBP21.39■■□□□ 1.01
SNED1-202ENST00000342631 IFNL2Q8IZJ0 200 aa21.39■■□□□ 1.01
SNED1-202ENST00000342631 HSP90AB1P08238 724 aaKnown RBP21.38■■□□□ 1.01
SNED1-202ENST00000342631 ZNF772Q68DY9 489 aaPredicted RBP21.38■■□□□ 1.01
SNED1-202ENST00000342631 GJD4Q96KN9 370 aaPredicted RBP21.37■■□□□ 1.01
SNED1-202ENST00000342631 E9PSI1 815 aa21.36■■□□□ 1.01
SNED1-202ENST00000342631 EXOC5O00471 708 aa21.35■■□□□ 1.01
SNED1-202ENST00000342631 PHKG2P15735 406 aa21.35■■□□□ 1.01
SNED1-202ENST00000342631 SHANK3Q9BYB0 1731 aa21.35■■□□□ 1.01
SNED1-202ENST00000342631 QTRT2Q9H974 415 aaKnown RBP21.35■■□□□ 1.01
SNED1-202ENST00000342631 ADAMTS7Q9UKP4 1686 aa21.35■■□□□ 1.01
SNED1-202ENST00000342631 TNS2Q63HR2 1409 aa21.35■■□□□ 1.01
SNED1-202ENST00000342631 CEMIPQ8WUJ3 1361 aa21.34■■□□□ 1.01
SNED1-202ENST00000342631 GLI3P10071 1580 aa21.33■■□□□ 1.01
SNED1-202ENST00000342631 CYP27B1O15528 508 aa21.33■■□□□ 1.01
SNED1-202ENST00000342631 SLFN5Q08AF3 891 aa21.33■■□□□ 1.01
SNED1-202ENST00000342631 LRRC37A3O60309 1634 aa21.33■■□□□ 1.01
SNED1-202ENST00000342631 MYH16Q9H6N6 1097 aa21.33■■□□□ 1
SNED1-202ENST00000342631 NKX1-1Q15270 411 aaPredicted RBP21.32■■□□□ 1
SNED1-202ENST00000342631 DDB1Q16531 1140 aa21.32■■□□□ 1
SNED1-202ENST00000342631 MCM10Q7L590 875 aa21.32■■□□□ 1
SNED1-202ENST00000342631 DCAF5Q96JK2 942 aa21.32■■□□□ 1
SNED1-202ENST00000342631 IFT57Q9NWB7 429 aa21.32■■□□□ 1
SNED1-202ENST00000342631 ONECUT3O60422 494 aaPredicted RBP21.31■■□□□ 1
SNED1-202ENST00000342631 GNAI1P63096 354 aa21.31■■□□□ 1
SNED1-202ENST00000342631 TRMT2AQ8IZ69 625 aaKnown RBP21.31■■□□□ 1
SNED1-202ENST00000342631 IL17REQ8NFR9 667 aa21.31■■□□□ 1
SNED1-202ENST00000342631 VIRMAQ69YN4 1812 aaKnown RBP21.31■■□□□ 1
SNED1-202ENST00000342631 THSD7AQ9UPZ6 1657 aa21.31■■□□□ 1
SNED1-202ENST00000342631 SCN11AQ9UI33 1791 aa21.31■■□□□ 1
SNED1-202ENST00000342631 RNMTO43148 476 aaKnown RBP21.31■■□□□ 1
SNED1-202ENST00000342631 DCTN1Q14203 1278 aa21.31■■□□□ 1
SNED1-202ENST00000342631 FAM98CQ17RN3 349 aaKnown RBP21.31■■□□□ 1
SNED1-202ENST00000342631 CDCA7LQ96GN5 454 aa21.3■■□□□ 1
SNED1-202ENST00000342631 CFAP44Q96MT7 982 aa21.3■■□□□ 1
SNED1-202ENST00000342631 BABAM1Q9NWV8 329 aa21.3■■□□□ 1
SNED1-202ENST00000342631 THUMPD2Q9BTF0 503 aaKnown RBP21.29■■□□□ 1
SNED1-202ENST00000342631 ZNF853P0CG23 659 aa21.29■■□□□ 1
SNED1-202ENST00000342631 MPRIPQ6WCQ1 1025 aa21.29■■□□□ 1
SNED1-202ENST00000342631 DDX54Q8TDD1 881 aaKnown RBP21.29■■□□□ 1
SNED1-202ENST00000342631 DUSP27Q5VZP5 1158 aa21.27■■□□□ 1
SNED1-202ENST00000342631 LGR6Q9HBX8 967 aa21.27■■□□□ 1
SNED1-202ENST00000342631 SPINK5Q9NQ38 1064 aaPredicted RBP21.27■■□□□ 1
SNED1-202ENST00000342631 KDM6AO15550 1401 aaPredicted RBP21.27■■□□□ 1
SNED1-202ENST00000342631 TEFQ10587 303 aa21.27■■□□□ 1
SNED1-202ENST00000342631 RBM6P78332 1123 aaKnown RBP21.26■□□□□ 0.99
SNED1-202ENST00000342631 TAF7Q15545 349 aaPredicted RBP21.26■□□□□ 0.99
SNED1-202ENST00000342631 ERVV-2B6SEH9 535 aa21.25■□□□□ 0.99
SNED1-202ENST00000342631 CHL1O00533 1208 aa21.25■□□□□ 0.99
SNED1-202ENST00000342631 MRC1P22897 1456 aa21.25■□□□□ 0.99
SNED1-202ENST00000342631 SIPA1L3O60292 1781 aaPredicted RBP21.24■□□□□ 0.99
SNED1-202ENST00000342631 ILDR1Q86SU0 546 aaPredicted RBP21.23■□□□□ 0.99
SNED1-202ENST00000342631 FANCIQ9NVI1 1328 aa21.23■□□□□ 0.99
SNED1-202ENST00000342631 SLC52A2Q9HAB3 445 aa21.23■□□□□ 0.99
SNED1-202ENST00000342631 LAS1LQ9Y4W2 734 aaKnown RBP21.23■□□□□ 0.99
SNED1-202ENST00000342631 A0A0G2JS52 829 aa21.22■□□□□ 0.99
SNED1-202ENST00000342631 MYT1Q01538 1121 aa21.22■□□□□ 0.99
SNED1-202ENST00000342631 SEPT12Q8IYM1 358 aa21.21■□□□□ 0.99
SNED1-202ENST00000342631 MBIPQ9NS73 344 aa21.21■□□□□ 0.99
SNED1-202ENST00000342631 CT47B1P0C2W7 299 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms