RNA–Protein interactions for RNA: ENST00000342628.6

FOXM1-201, Transcript of forkhead box M1, humanhuman

TSL 1 (best) BASIC

Gene FOXM1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-201ENST00000342628 HNRNPUQ00839 825 aaKnown RBP eCLIP10.8□□□□□ -0.68
FOXM1-201ENST00000342628 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.8□□□□□ -0.68
FOXM1-201ENST00000342628 YTHDC1Q96MU7 727 aaKnown RBP10.8□□□□□ -0.68
FOXM1-201ENST00000342628 APAF1O14727 1248 aa10.79□□□□□ -0.68
FOXM1-201ENST00000342628 NEUROD2Q15784 382 aa10.79□□□□□ -0.68
FOXM1-201ENST00000342628 GJD4Q96KN9 370 aaPredicted RBP10.79□□□□□ -0.68
FOXM1-201ENST00000342628 C1orf141Q5JVX7 400 aa10.79□□□□□ -0.68
FOXM1-201ENST00000342628 NGEFQ8N5V2 710 aa10.79□□□□□ -0.68
FOXM1-201ENST00000342628 PLEKHF1Q96S99 279 aa10.79□□□□□ -0.68
FOXM1-201ENST00000342628 NCAPD2Q15021 1401 aa10.78□□□□□ -0.68
FOXM1-201ENST00000342628 EXOC5O00471 708 aa10.78□□□□□ -0.68
FOXM1-201ENST00000342628 ZCRB1Q8TBF4 217 aaKnown RBP10.78□□□□□ -0.68
FOXM1-201ENST00000342628 SALL2Q9Y467 1007 aaPredicted RBP10.78□□□□□ -0.68
FOXM1-201ENST00000342628 LMOD3Q0VAK6 560 aa10.78□□□□□ -0.68
FOXM1-201ENST00000342628 NFE2L2Q16236 605 aa10.78□□□□□ -0.68
FOXM1-201ENST00000342628 BARGINQ6ZT62 677 aa10.78□□□□□ -0.68
FOXM1-201ENST00000342628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.78□□□□□ -0.68
FOXM1-201ENST00000342628 FAM98CQ17RN3 349 aaKnown RBP10.78□□□□□ -0.68
FOXM1-201ENST00000342628 ZNF530Q6P9A1 599 aaPredicted RBP10.78□□□□□ -0.68
FOXM1-201ENST00000342628 RTF1Q92541 710 aaKnown RBP10.78□□□□□ -0.68
FOXM1-201ENST00000342628 PHACTR3Q96KR7 559 aa10.78□□□□□ -0.68
FOXM1-201ENST00000342628 TMPOP42166 694 aaKnown RBP10.77□□□□□ -0.68
FOXM1-201ENST00000342628 RIPK4P57078 832 aa10.77□□□□□ -0.68
FOXM1-201ENST00000342628 PLEKHG2Q9H7P9 1386 aa10.77□□□□□ -0.69
FOXM1-201ENST00000342628 ATRNO75882 1429 aa10.77□□□□□ -0.69
FOXM1-201ENST00000342628 DDB1Q16531 1140 aa10.77□□□□□ -0.69
FOXM1-201ENST00000342628 RRP7AQ9Y3A4 280 aaKnown RBP10.77□□□□□ -0.69
FOXM1-201ENST00000342628 PARP4Q9UKK3 1724 aaKnown RBP10.77□□□□□ -0.69
FOXM1-201ENST00000342628 RBM6P78332 1123 aaKnown RBP10.77□□□□□ -0.69
FOXM1-201ENST00000342628 MTHFSDQ2M296 383 aaKnown RBP10.77□□□□□ -0.69
FOXM1-201ENST00000342628 SENP3-EIF4A1A0A087X0R7 540 aa10.76□□□□□ -0.69
FOXM1-201ENST00000342628 IFNL2Q8IZJ0 200 aa10.76□□□□□ -0.69
FOXM1-201ENST00000342628 MEGF6O75095 1541 aa10.75□□□□□ -0.69
FOXM1-201ENST00000342628 PCDH11XQ9BZA7 1347 aa10.75□□□□□ -0.69
FOXM1-201ENST00000342628 PCDH11YQ9BZA8 1340 aa10.75□□□□□ -0.69
FOXM1-201ENST00000342628 HSP90AB1P08238 724 aaKnown RBP10.75□□□□□ -0.69
FOXM1-201ENST00000342628 OVOS2A0A0G2JMS6 1433 aa10.75□□□□□ -0.69
FOXM1-201ENST00000342628 GNAT3A8MTJ3 354 aa10.75□□□□□ -0.69
FOXM1-201ENST00000342628 RXRBP28702 533 aa10.75□□□□□ -0.69
FOXM1-201ENST00000342628 PDE3BQ13370 1112 aa10.75□□□□□ -0.69
FOXM1-201ENST00000342628 DDX54Q8TDD1 881 aaKnown RBP10.75□□□□□ -0.69
FOXM1-201ENST00000342628 AKAP4Q5JQC9 854 aa10.75□□□□□ -0.69
FOXM1-201ENST00000342628 NCBP3Q53F19 620 aaKnown RBP10.74□□□□□ -0.69
FOXM1-201ENST00000342628 HTATSF1O43719 755 aaKnown RBP10.74□□□□□ -0.69
FOXM1-201ENST00000342628 CALD1Q05682 793 aaKnown RBP10.74□□□□□ -0.69
FOXM1-201ENST00000342628 MAP3K5Q99683 1374 aa10.73□□□□□ -0.69
FOXM1-201ENST00000342628 DISP2A7MBM2 1401 aa10.73□□□□□ -0.69
FOXM1-201ENST00000342628 WNK3Q9BYP7 1800 aa10.72□□□□□ -0.69
FOXM1-201ENST00000342628 KAT6BQ8WYB5 2073 aa10.72□□□□□ -0.69
FOXM1-201ENST00000342628 PHKG2P15735 406 aa10.72□□□□□ -0.69
FOXM1-201ENST00000342628 CCDC27Q2M243 656 aa10.72□□□□□ -0.69
FOXM1-201ENST00000342628 SEPT12Q8IYM1 358 aa10.72□□□□□ -0.69
FOXM1-201ENST00000342628 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
FOXM1-201ENST00000342628 GLI3P10071 1580 aa10.72□□□□□ -0.69
FOXM1-201ENST00000342628 PKD1L3Q7Z443 1732 aa10.71□□□□□ -0.69
FOXM1-201ENST00000342628 TNS2Q63HR2 1409 aa10.71□□□□□ -0.69
FOXM1-201ENST00000342628 ONECUT3O60422 494 aaPredicted RBP10.71□□□□□ -0.69
FOXM1-201ENST00000342628 TEFQ10587 303 aa10.71□□□□□ -0.69
FOXM1-201ENST00000342628 DLG5Q8TDM6 1919 aa10.71□□□□□ -0.69
FOXM1-201ENST00000342628 ZBED9Q6R2W3 1325 aa10.71□□□□□ -0.7
FOXM1-201ENST00000342628 CYP27B1O15528 508 aa10.71□□□□□ -0.7
FOXM1-201ENST00000342628 MPRIPQ6WCQ1 1025 aa10.71□□□□□ -0.7
FOXM1-201ENST00000342628 DCAF5Q96JK2 942 aa10.71□□□□□ -0.7
FOXM1-201ENST00000342628 CENPBP07199 599 aaPredicted RBP10.7□□□□□ -0.7
FOXM1-201ENST00000342628 WWC1Q8IX03 1113 aa10.7□□□□□ -0.7
FOXM1-201ENST00000342628 WDR63Q8IWG1 891 aa10.7□□□□□ -0.7
FOXM1-201ENST00000342628 RGS17Q9UGC6 210 aaPredicted RBP10.7□□□□□ -0.7
FOXM1-201ENST00000342628 POTEAQ6S8J7 498 aa10.7□□□□□ -0.7
FOXM1-201ENST00000342628 MCM10Q7L590 875 aa10.7□□□□□ -0.7
FOXM1-201ENST00000342628 TRIM35Q9UPQ4 493 aa10.7□□□□□ -0.7
FOXM1-201ENST00000342628 RNMTO43148 476 aaKnown RBP10.69□□□□□ -0.7
FOXM1-201ENST00000342628 GOLGA2Q08379 1002 aa10.69□□□□□ -0.7
FOXM1-201ENST00000342628 DCTN1Q14203 1278 aa10.69□□□□□ -0.7
FOXM1-201ENST00000342628 LAS1LQ9Y4W2 734 aaKnown RBP10.69□□□□□ -0.7
FOXM1-201ENST00000342628 CABP4P57796 275 aa10.68□□□□□ -0.7
FOXM1-201ENST00000342628 KRT27Q7Z3Y8 459 aa10.68□□□□□ -0.7
FOXM1-201ENST00000342628 LRRC37A3O60309 1634 aa10.68□□□□□ -0.7
FOXM1-201ENST00000342628 GNAI1P63096 354 aa10.68□□□□□ -0.7
FOXM1-201ENST00000342628 NKX1-1Q15270 411 aaPredicted RBP10.68□□□□□ -0.7
FOXM1-201ENST00000342628 IL17REQ8NFR9 667 aa10.68□□□□□ -0.7
FOXM1-201ENST00000342628 LGR6Q9HBX8 967 aa10.68□□□□□ -0.7
FOXM1-201ENST00000342628 THSD7AQ9UPZ6 1657 aa10.67□□□□□ -0.7
FOXM1-201ENST00000342628 MARCH10Q8NA82 808 aaPredicted RBP10.67□□□□□ -0.7
FOXM1-201ENST00000342628 THUMPD2Q9BTF0 503 aaKnown RBP10.67□□□□□ -0.7
FOXM1-201ENST00000342628 ERVV-2B6SEH9 535 aa10.67□□□□□ -0.7
FOXM1-201ENST00000342628 MYH16Q9H6N6 1097 aa10.67□□□□□ -0.7
FOXM1-201ENST00000342628 IL16Q14005 1332 aa10.67□□□□□ -0.7
FOXM1-201ENST00000342628 TAF7Q15545 349 aaPredicted RBP10.67□□□□□ -0.7
FOXM1-201ENST00000342628 SYTL4Q96C24 671 aaPredicted RBP10.67□□□□□ -0.7
FOXM1-201ENST00000342628 E9PSI1 815 aa10.66□□□□□ -0.7
FOXM1-201ENST00000342628 TMOD3Q9NYL9 352 aa10.66□□□□□ -0.7
FOXM1-201ENST00000342628 IFT57Q9NWB7 429 aa10.66□□□□□ -0.7
FOXM1-201ENST00000342628 SHANK3Q9BYB0 1731 aa10.65□□□□□ -0.7
FOXM1-201ENST00000342628 SLC52A2Q9HAB3 445 aa10.65□□□□□ -0.7
FOXM1-201ENST00000342628 VIRMAQ69YN4 1812 aaKnown RBP10.65□□□□□ -0.7
FOXM1-201ENST00000342628 FAM196AQ6ZSG2 479 aa10.65□□□□□ -0.7
FOXM1-201ENST00000342628 CFAP44Q96MT7 982 aa10.65□□□□□ -0.7
FOXM1-201ENST00000342628 TSPYL4Q9UJ04 414 aa10.65□□□□□ -0.7
FOXM1-201ENST00000342628 SCN11AQ9UI33 1791 aa10.65□□□□□ -0.7
FOXM1-201ENST00000342628 CEMIPQ8WUJ3 1361 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms