RNA–Protein interactions for RNA: ENST00000342404.7

CCDC83-202, Transcript of coiled-coil domain containing 83, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC83, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83-202ENST00000342404 RTF1Q92541 710 aaKnown RBP11.32□□□□□ -0.6
CCDC83-202ENST00000342404 SPINK5Q9NQ38 1064 aaPredicted RBP11.32□□□□□ -0.6
CCDC83-202ENST00000342404 LAS1LQ9Y4W2 734 aaKnown RBP11.32□□□□□ -0.6
CCDC83-202ENST00000342404 CRB1P82279 1406 aa11.32□□□□□ -0.6
CCDC83-202ENST00000342404 TATP17735 454 aaPredicted RBP11.32□□□□□ -0.6
CCDC83-202ENST00000342404 CCDC27Q2M243 656 aa11.31□□□□□ -0.6
CCDC83-202ENST00000342404 ZNF530Q6P9A1 599 aaPredicted RBP11.31□□□□□ -0.6
CCDC83-202ENST00000342404 CARD10Q9BWT7 1032 aa11.31□□□□□ -0.6
CCDC83-202ENST00000342404 LMOD3Q0VAK6 560 aa11.3□□□□□ -0.6
CCDC83-202ENST00000342404 PDE3BQ13370 1112 aa11.3□□□□□ -0.6
CCDC83-202ENST00000342404 NCAPD2Q15021 1401 aa11.3□□□□□ -0.6
CCDC83-202ENST00000342404 PLEKHO1Q53GL0 409 aaPredicted RBP11.3□□□□□ -0.6
CCDC83-202ENST00000342404 EP400Q96L91 3159 aa11.3□□□□□ -0.6
CCDC83-202ENST00000342404 GNAT3A8MTJ3 354 aa11.3□□□□□ -0.6
CCDC83-202ENST00000342404 C1orf141Q5JVX7 400 aa11.3□□□□□ -0.6
CCDC83-202ENST00000342404 E9PSI1 815 aa11.29□□□□□ -0.6
CCDC83-202ENST00000342404 IL2RBP14784 551 aa11.29□□□□□ -0.6
CCDC83-202ENST00000342404 AMOTQ4VCS5 1084 aa11.29□□□□□ -0.6
CCDC83-202ENST00000342404 MAP3K5Q99683 1374 aa11.29□□□□□ -0.6
CCDC83-202ENST00000342404 NRAPQ86VF7 1730 aa11.29□□□□□ -0.6
CCDC83-202ENST00000342404 KAT6BQ8WYB5 2073 aa11.29□□□□□ -0.6
CCDC83-202ENST00000342404 SLIT2O94813 1529 aa11.29□□□□□ -0.6
CCDC83-202ENST00000342404 NWD2Q9ULI1 1742 aa11.28□□□□□ -0.6
CCDC83-202ENST00000342404 WDR63Q8IWG1 891 aa11.28□□□□□ -0.6
CCDC83-202ENST00000342404 TSR2Q969E8 191 aaKnown RBP11.28□□□□□ -0.6
CCDC83-202ENST00000342404 USP21Q9UK80 565 aa11.28□□□□□ -0.6
CCDC83-202ENST00000342404 SLFN5Q08AF3 891 aa11.28□□□□□ -0.6
CCDC83-202ENST00000342404 DUSP27Q5VZP5 1158 aa11.28□□□□□ -0.6
CCDC83-202ENST00000342404 MPRIPQ6WCQ1 1025 aa11.28□□□□□ -0.6
CCDC83-202ENST00000342404 UNC5CLQ8IV45 518 aa11.28□□□□□ -0.6
CCDC83-202ENST00000342404 SPG7Q9UQ90 795 aa11.28□□□□□ -0.6
CCDC83-202ENST00000342404 PARP4Q9UKK3 1724 aaKnown RBP11.28□□□□□ -0.6
CCDC83-202ENST00000342404 A0A0G2JS52 829 aa11.27□□□□□ -0.61
CCDC83-202ENST00000342404 MYT1Q01538 1121 aa11.27□□□□□ -0.61
CCDC83-202ENST00000342404 AKAP4Q5JQC9 854 aa11.27□□□□□ -0.61
CCDC83-202ENST00000342404 DDX54Q8TDD1 881 aaKnown RBP11.27□□□□□ -0.61
CCDC83-202ENST00000342404 MYH16Q9H6N6 1097 aa11.27□□□□□ -0.61
CCDC83-202ENST00000342404 AFF2P51816 1311 aa11.26□□□□□ -0.61
CCDC83-202ENST00000342404 BCL9LQ86UU0 1499 aa11.26□□□□□ -0.61
CCDC83-202ENST00000342404 CALD1Q05682 793 aaKnown RBP11.26□□□□□ -0.61
CCDC83-202ENST00000342404 NCBP3Q53F19 620 aaKnown RBP11.26□□□□□ -0.61
CCDC83-202ENST00000342404 FNBP4Q8N3X1 1017 aaPredicted RBP11.26□□□□□ -0.61
CCDC83-202ENST00000342404 ZCRB1Q8TBF4 217 aaKnown RBP11.26□□□□□ -0.61
CCDC83-202ENST00000342404 FBXO41Q8TF61 875 aa11.26□□□□□ -0.61
CCDC83-202ENST00000342404 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
CCDC83-202ENST00000342404 SPATA31A1Q5TZJ5 1347 aa11.26□□□□□ -0.61
CCDC83-202ENST00000342404 FANCIQ9NVI1 1328 aa11.26□□□□□ -0.61
CCDC83-202ENST00000342404 VIRMAQ69YN4 1812 aaKnown RBP11.25□□□□□ -0.61
CCDC83-202ENST00000342404 IL17REQ8NFR9 667 aa11.25□□□□□ -0.61
CCDC83-202ENST00000342404 LGR6Q9HBX8 967 aa11.25□□□□□ -0.61
CCDC83-202ENST00000342404 MIS18AQ9NYP9 233 aa11.25□□□□□ -0.61
CCDC83-202ENST00000342404 CYP27B1O15528 508 aa11.25□□□□□ -0.61
CCDC83-202ENST00000342404 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
CCDC83-202ENST00000342404 IFNL2Q8IZJ0 200 aa11.25□□□□□ -0.61
CCDC83-202ENST00000342404 SPATA31A5Q5VU36 1347 aa11.24□□□□□ -0.61
CCDC83-202ENST00000342404 SPATA31A7Q8IWB4 1347 aa11.24□□□□□ -0.61
CCDC83-202ENST00000342404 PCDH11XQ9BZA7 1347 aa11.24□□□□□ -0.61
CCDC83-202ENST00000342404 PCDH11YQ9BZA8 1340 aa11.24□□□□□ -0.61
CCDC83-202ENST00000342404 PKD1L3Q7Z443 1732 aa11.24□□□□□ -0.61
CCDC83-202ENST00000342404 PHKG2P15735 406 aa11.24□□□□□ -0.61
CCDC83-202ENST00000342404 GNAI1P63096 354 aa11.24□□□□□ -0.61
CCDC83-202ENST00000342404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC83-202ENST00000342404 SUPT16HQ9Y5B9 1047 aaKnown RBP11.24□□□□□ -0.61
CCDC83-202ENST00000342404 TEFQ10587 303 aa11.23□□□□□ -0.61
CCDC83-202ENST00000342404 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
CCDC83-202ENST00000342404 MBIPQ9NS73 344 aa11.23□□□□□ -0.61
CCDC83-202ENST00000342404 IFT57Q9NWB7 429 aa11.23□□□□□ -0.61
CCDC83-202ENST00000342404 IL16Q14005 1332 aa11.23□□□□□ -0.61
CCDC83-202ENST00000342404 HTATSF1O43719 755 aaKnown RBP11.23□□□□□ -0.61
CCDC83-202ENST00000342404 VPS72Q15906 364 aa11.23□□□□□ -0.61
CCDC83-202ENST00000342404 TSPYL4Q9UJ04 414 aa11.23□□□□□ -0.61
CCDC83-202ENST00000342404 EXOC5O00471 708 aa11.22□□□□□ -0.61
CCDC83-202ENST00000342404 ELL2O00472 640 aaPredicted RBP11.22□□□□□ -0.61
CCDC83-202ENST00000342404 TRMT2AQ8IZ69 625 aaKnown RBP11.22□□□□□ -0.61
CCDC83-202ENST00000342404 RCAN3Q9UKA8 241 aa11.22□□□□□ -0.61
CCDC83-202ENST00000342404 THRAP3Q9Y2W1 955 aaKnown RBP11.22□□□□□ -0.61
CCDC83-202ENST00000342404 WNK3Q9BYP7 1800 aa11.22□□□□□ -0.61
CCDC83-202ENST00000342404 RNMTO43148 476 aaKnown RBP11.21□□□□□ -0.61
CCDC83-202ENST00000342404 EXOSC9Q06265 439 aaKnown RBP11.21□□□□□ -0.61
CCDC83-202ENST00000342404 DDB1Q16531 1140 aa11.21□□□□□ -0.61
CCDC83-202ENST00000342404 DISP2A7MBM2 1401 aa11.21□□□□□ -0.61
CCDC83-202ENST00000342404 SHANK3Q9BYB0 1731 aa11.21□□□□□ -0.62
CCDC83-202ENST00000342404 CEMIPQ8WUJ3 1361 aa11.21□□□□□ -0.62
CCDC83-202ENST00000342404 KDM6AO15550 1401 aaPredicted RBP11.21□□□□□ -0.62
CCDC83-202ENST00000342404 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
CCDC83-202ENST00000342404 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.2□□□□□ -0.62
CCDC83-202ENST00000342404 TAF7Q15545 349 aaPredicted RBP11.2□□□□□ -0.62
CCDC83-202ENST00000342404 KRT24Q2M2I5 525 aa11.2□□□□□ -0.62
CCDC83-202ENST00000342404 DCAF5Q96JK2 942 aa11.2□□□□□ -0.62
CCDC83-202ENST00000342404 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
CCDC83-202ENST00000342404 TRPC5Q9UL62 973 aaPredicted RBP11.2□□□□□ -0.62
CCDC83-202ENST00000342404 BTBD11A6QL63 1104 aa11.19□□□□□ -0.62
CCDC83-202ENST00000342404 HSP90AB1P08238 724 aaKnown RBP11.19□□□□□ -0.62
CCDC83-202ENST00000342404 ZNF853P0CG23 659 aa11.19□□□□□ -0.62
CCDC83-202ENST00000342404 TNS2Q63HR2 1409 aa11.19□□□□□ -0.62
CCDC83-202ENST00000342404 NFATC2IPQ8NCF5 419 aa11.19□□□□□ -0.62
CCDC83-202ENST00000342404 GJD4Q96KN9 370 aaPredicted RBP11.19□□□□□ -0.62
CCDC83-202ENST00000342404 CDCA7Q9BWT1 371 aaPredicted RBP11.19□□□□□ -0.62
CCDC83-202ENST00000342404 SCN11AQ9UI33 1791 aa11.19□□□□□ -0.62
CCDC83-202ENST00000342404 PLEKHG2Q9H7P9 1386 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms