RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 COL23A1Q86Y22 540 aaPredicted RBP24.1■■□□□ 1.45
TRA2B-202ENST00000342294 GOLGB1Q14789 3259 aaKnown RBP24.1■■□□□ 1.45
TRA2B-202ENST00000342294 TMC1Q8TDI8 760 aa24.09■■□□□ 1.45
TRA2B-202ENST00000342294 LY75O60449 1722 aa24.09■■□□□ 1.45
TRA2B-202ENST00000342294 LTV1Q96GA3 475 aaPredicted RBP24.08■■□□□ 1.45
TRA2B-202ENST00000342294 CCNL1Q9UK58 526 aaPredicted RBP24.08■■□□□ 1.45
TRA2B-202ENST00000342294 ATP10DQ9P241 1426 aa24.07■■□□□ 1.44
TRA2B-202ENST00000342294 A0A1W2PP64 1363 aa24.06■■□□□ 1.44
TRA2B-202ENST00000342294 ZCRB1Q8TBF4 217 aaKnown RBP24.06■■□□□ 1.44
TRA2B-202ENST00000342294 TERF2IPQ9NYB0 399 aa24.06■■□□□ 1.44
TRA2B-202ENST00000342294 FAM208AQ9UK61 1670 aaKnown RBP24.05■■□□□ 1.44
TRA2B-202ENST00000342294 DOT1LQ8TEK3 1739 aa24.04■■□□□ 1.44
TRA2B-202ENST00000342294 MSH5O43196 834 aa24.03■■□□□ 1.44
TRA2B-202ENST00000342294 HOXC9P31274 260 aa24.03■■□□□ 1.44
TRA2B-202ENST00000342294 PUS7Q96PZ0 661 aaKnown RBP24.03■■□□□ 1.44
TRA2B-202ENST00000342294 CD2APQ9Y5K6 639 aa24.03■■□□□ 1.44
TRA2B-202ENST00000342294 MAP3K19Q56UN5 1328 aa24.03■■□□□ 1.44
TRA2B-202ENST00000342294 MEGF6O75095 1541 aa24.02■■□□□ 1.44
TRA2B-202ENST00000342294 MSL1Q68DK7 614 aa24.02■■□□□ 1.44
TRA2B-202ENST00000342294 NEUROD1Q13562 356 aa24.01■■□□□ 1.43
TRA2B-202ENST00000342294 ADCY9O60503 1353 aa24.01■■□□□ 1.43
TRA2B-202ENST00000342294 USP47Q96K76 1375 aa24.01■■□□□ 1.43
TRA2B-202ENST00000342294 GPBP1L1Q9HC44 474 aaPredicted RBP23.99■■□□□ 1.43
TRA2B-202ENST00000342294 HSPA6P17066 643 aa23.98■■□□□ 1.43
TRA2B-202ENST00000342294 FBLN1P23142 703 aa23.98■■□□□ 1.43
TRA2B-202ENST00000342294 CARD11Q9BXL7 1154 aa23.98■■□□□ 1.43
TRA2B-202ENST00000342294 AMPHP49418 695 aa23.97■■□□□ 1.43
TRA2B-202ENST00000342294 NBPF6Q5VWK0 638 aa23.96■■□□□ 1.43
TRA2B-202ENST00000342294 FLAD1Q8NFF5 587 aa23.96■■□□□ 1.43
TRA2B-202ENST00000342294 COG3Q96JB2 828 aa23.96■■□□□ 1.43
TRA2B-202ENST00000342294 NBPF4Q96M43 638 aa23.96■■□□□ 1.43
TRA2B-202ENST00000342294 CGNL1Q0VF96 1302 aa23.95■■□□□ 1.42
TRA2B-202ENST00000342294 HMGB2P26583 209 aaKnown RBP23.92■■□□□ 1.42
TRA2B-202ENST00000342294 RGPD2P0DJD1 1756 aa23.92■■□□□ 1.42
TRA2B-202ENST00000342294 RTL1A6NKG5 1358 aa23.91■■□□□ 1.42
TRA2B-202ENST00000342294 C5P01031 1676 aa23.9■■□□□ 1.42
TRA2B-202ENST00000342294 AMIGO3Q86WK7 504 aa23.9■■□□□ 1.42
TRA2B-202ENST00000342294 USHBP1Q8N6Y0 703 aa23.9■■□□□ 1.42
TRA2B-202ENST00000342294 ZNF526Q8TF50 670 aaPredicted RBP23.9■■□□□ 1.42
TRA2B-202ENST00000342294 PALLDQ8WX93 1383 aa23.9■■□□□ 1.42
TRA2B-202ENST00000342294 RAPGEF4Q8WZA2 1011 aa23.89■■□□□ 1.41
TRA2B-202ENST00000342294 TESK2Q96S53 571 aa23.88■■□□□ 1.41
TRA2B-202ENST00000342294 IGSF1Q8N6C5 1336 aa23.87■■□□□ 1.41
TRA2B-202ENST00000342294 RRS1Q15050 365 aaKnown RBP23.87■■□□□ 1.41
TRA2B-202ENST00000342294 KIF3CO14782 793 aa23.86■■□□□ 1.41
TRA2B-202ENST00000342294 TATP17735 454 aaPredicted RBP23.86■■□□□ 1.41
TRA2B-202ENST00000342294 PCDH11XQ9BZA7 1347 aa23.85■■□□□ 1.41
TRA2B-202ENST00000342294 PCDH11YQ9BZA8 1340 aa23.85■■□□□ 1.41
TRA2B-202ENST00000342294 MPRIPQ6WCQ1 1025 aa23.85■■□□□ 1.41
TRA2B-202ENST00000342294 TAF1LQ8IZX4 1826 aa23.84■■□□□ 1.41
TRA2B-202ENST00000342294 CYP27B1O15528 508 aa23.84■■□□□ 1.41
TRA2B-202ENST00000342294 FYB1O15117 783 aa23.83■■□□□ 1.41
TRA2B-202ENST00000342294 SMIM5Q71RC9 77 aa23.83■■□□□ 1.41
TRA2B-202ENST00000342294 SMARCC1Q92922 1105 aaPredicted RBP23.83■■□□□ 1.41
TRA2B-202ENST00000342294 AK7Q96M32 723 aa23.83■■□□□ 1.41
TRA2B-202ENST00000342294 C4BP0C0L5 1744 aa23.83■■□□□ 1.41
TRA2B-202ENST00000342294 TOGARAM1Q9Y4F4 1720 aa23.82■■□□□ 1.4
TRA2B-202ENST00000342294 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.82■■□□□ 1.4
TRA2B-202ENST00000342294 INSRP06213 1382 aa23.81■■□□□ 1.4
TRA2B-202ENST00000342294 WWC3Q9ULE0 1092 aa23.81■■□□□ 1.4
TRA2B-202ENST00000342294 SMG6Q86US8 1419 aaKnown RBP23.81■■□□□ 1.4
TRA2B-202ENST00000342294 HSP90AB2PQ58FF8 381 aa23.8■■□□□ 1.4
TRA2B-202ENST00000342294 GGNBP2Q9H3C7 697 aa23.8■■□□□ 1.4
TRA2B-202ENST00000342294 PHF14O94880 888 aa23.79■■□□□ 1.4
TRA2B-202ENST00000342294 SSFA2P28290 1259 aa23.79■■□□□ 1.4
TRA2B-202ENST00000342294 PIGBQ92521 554 aa23.79■■□□□ 1.4
TRA2B-202ENST00000342294 NSD3Q9BZ95 1437 aa23.78■■□□□ 1.4
TRA2B-202ENST00000342294 ST20-MTHFSA0A0A6YYL1 179 aa23.78■■□□□ 1.4
TRA2B-202ENST00000342294 UBR3Q6ZT12 1888 aa23.77■■□□□ 1.4
TRA2B-202ENST00000342294 NKX1-1Q15270 411 aaPredicted RBP23.77■■□□□ 1.4
TRA2B-202ENST00000342294 LINC00116Q8NCU8 138 aa23.76■■□□□ 1.39
TRA2B-202ENST00000342294 CICQ96RK0 1608 aaPredicted RBP23.76■■□□□ 1.39
TRA2B-202ENST00000342294 SLC24A1O60721 1099 aa23.75■■□□□ 1.39
TRA2B-202ENST00000342294 APLP1P51693 650 aa23.75■■□□□ 1.39
TRA2B-202ENST00000342294 DNAJC5GQ8N7S2 189 aa23.75■■□□□ 1.39
TRA2B-202ENST00000342294 FLT4P35916 1363 aa23.75■■□□□ 1.39
TRA2B-202ENST00000342294 KIF24Q5T7B8 1368 aa23.75■■□□□ 1.39
TRA2B-202ENST00000342294 LOC102724428A0A0B4J2F2 783 aa23.74■■□□□ 1.39
TRA2B-202ENST00000342294 SIK1P57059 783 aa23.74■■□□□ 1.39
TRA2B-202ENST00000342294 MAP2P11137 1827 aaKnown RBP23.73■■□□□ 1.39
TRA2B-202ENST00000342294 ITGB4P16144 1822 aa23.73■■□□□ 1.39
TRA2B-202ENST00000342294 NCAPD2Q15021 1401 aa23.72■■□□□ 1.39
TRA2B-202ENST00000342294 TOMM70O94826 608 aa23.71■■□□□ 1.39
TRA2B-202ENST00000342294 ITPK1Q13572 414 aa23.71■■□□□ 1.39
TRA2B-202ENST00000342294 PXDNLA1KZ92 1463 aa23.7■■□□□ 1.38
TRA2B-202ENST00000342294 PKD1L3Q7Z443 1732 aa23.7■■□□□ 1.38
TRA2B-202ENST00000342294 MMP10P09238 476 aa23.69■■□□□ 1.38
TRA2B-202ENST00000342294 TONSLQ96HA7 1378 aa23.68■■□□□ 1.38
TRA2B-202ENST00000342294 GNPATO15228 680 aa23.68■■□□□ 1.38
TRA2B-202ENST00000342294 ASAP1Q9ULH1 1129 aa23.68■■□□□ 1.38
TRA2B-202ENST00000342294 TGFB2P61812 414 aa23.67■■□□□ 1.38
TRA2B-202ENST00000342294 SPG7Q9UQ90 795 aa23.67■■□□□ 1.38
TRA2B-202ENST00000342294 KIAA1551Q9HCM1 1747 aa23.65■■□□□ 1.38
TRA2B-202ENST00000342294 ATP6V1AP38606 617 aa23.65■■□□□ 1.38
TRA2B-202ENST00000342294 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.65■■□□□ 1.386e-8■□□□□ 9.9
TRA2B-202ENST00000342294 TMOD3Q9NYL9 352 aa23.65■■□□□ 1.38
TRA2B-202ENST00000342294 EMILIN1Q9Y6C2 1016 aa23.65■■□□□ 1.38
TRA2B-202ENST00000342294 NMRK2Q9NPI5 230 aa23.64■■□□□ 1.37
TRA2B-202ENST00000342294 BCS1LQ9Y276 419 aa23.64■■□□□ 1.37
TRA2B-202ENST00000342294 KIF13BQ9NQT8 1826 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms