RNA–Protein interactions for RNA: ENST00000341918.4

CXCL17-201, Transcript of C-X-C motif chemokine ligand 17, humanhuman

TSL 3

Gene CXCL17, Length 748 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL17-201ENST00000341918 A0A1W2PP64 1363 aa16.23■□□□□ 0.19
CXCL17-201ENST00000341918 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.19
CXCL17-201ENST00000341918 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
CXCL17-201ENST00000341918 DDX54Q8TDD1 881 aaKnown RBP16.22■□□□□ 0.19
CXCL17-201ENST00000341918 SLC12A5Q9H2X9 1139 aa16.21■□□□□ 0.19
CXCL17-201ENST00000341918 KLHL34Q8N239 644 aa16.2■□□□□ 0.18
CXCL17-201ENST00000341918 TERF2IPQ9NYB0 399 aa16.2■□□□□ 0.18
CXCL17-201ENST00000341918 ADCY9O60503 1353 aa16.19■□□□□ 0.18
CXCL17-201ENST00000341918 KCNQ4P56696 695 aa16.19■□□□□ 0.18
CXCL17-201ENST00000341918 SIN3AQ96ST3 1273 aa16.19■□□□□ 0.18
CXCL17-201ENST00000341918 MEGF6O75095 1541 aa16.19■□□□□ 0.18
CXCL17-201ENST00000341918 COL23A1Q86Y22 540 aaPredicted RBP16.18■□□□□ 0.18
CXCL17-201ENST00000341918 PELP1Q8IZL8 1130 aaKnown RBP16.18■□□□□ 0.18
CXCL17-201ENST00000341918 ZCRB1Q8TBF4 217 aaKnown RBP16.18■□□□□ 0.18
CXCL17-201ENST00000341918 ATP10DQ9P241 1426 aa16.18■□□□□ 0.18
CXCL17-201ENST00000341918 MAP3K19Q56UN5 1328 aa16.18■□□□□ 0.18
CXCL17-201ENST00000341918 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
CXCL17-201ENST00000341918 SYTL4Q96C24 671 aaPredicted RBP16.17■□□□□ 0.18
CXCL17-201ENST00000341918 CCNL1Q9UK58 526 aaPredicted RBP16.17■□□□□ 0.18
CXCL17-201ENST00000341918 CGNL1Q0VF96 1302 aa16.17■□□□□ 0.18
CXCL17-201ENST00000341918 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
CXCL17-201ENST00000341918 HOXC9P31274 260 aa16.16■□□□□ 0.18
CXCL17-201ENST00000341918 CD2APQ9Y5K6 639 aa16.16■□□□□ 0.18
CXCL17-201ENST00000341918 USP47Q96K76 1375 aa16.15■□□□□ 0.18
CXCL17-201ENST00000341918 HMGB2P26583 209 aaKnown RBP16.15■□□□□ 0.18
CXCL17-201ENST00000341918 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
CXCL17-201ENST00000341918 C5P01031 1676 aa16.14■□□□□ 0.18
CXCL17-201ENST00000341918 LTV1Q96GA3 475 aaPredicted RBP16.14■□□□□ 0.17
CXCL17-201ENST00000341918 CARD11Q9BXL7 1154 aa16.14■□□□□ 0.17
CXCL17-201ENST00000341918 TAF1LQ8IZX4 1826 aa16.13■□□□□ 0.17
CXCL17-201ENST00000341918 FLAD1Q8NFF5 587 aa16.13■□□□□ 0.17
CXCL17-201ENST00000341918 COG3Q96JB2 828 aa16.12■□□□□ 0.17
CXCL17-201ENST00000341918 HSPA6P17066 643 aa16.1■□□□□ 0.17
CXCL17-201ENST00000341918 AMPHP49418 695 aa16.1■□□□□ 0.17
CXCL17-201ENST00000341918 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
CXCL17-201ENST00000341918 NEUROD1Q13562 356 aa16.1■□□□□ 0.17
CXCL17-201ENST00000341918 NBPF6Q5VWK0 638 aa16.1■□□□□ 0.17
CXCL17-201ENST00000341918 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
CXCL17-201ENST00000341918 NBPF4Q96M43 638 aa16.1■□□□□ 0.17
CXCL17-201ENST00000341918 TESK2Q96S53 571 aa16.1■□□□□ 0.17
CXCL17-201ENST00000341918 GPBP1L1Q9HC44 474 aaPredicted RBP16.1■□□□□ 0.17
CXCL17-201ENST00000341918 TOGARAM1Q9Y4F4 1720 aa16.09■□□□□ 0.17
CXCL17-201ENST00000341918 PALLDQ8WX93 1383 aa16.09■□□□□ 0.17
CXCL17-201ENST00000341918 FBLN1P23142 703 aa16.08■□□□□ 0.16
CXCL17-201ENST00000341918 C4BP0C0L5 1744 aa16.08■□□□□ 0.16
CXCL17-201ENST00000341918 PCDH11XQ9BZA7 1347 aa16.07■□□□□ 0.16
CXCL17-201ENST00000341918 PCDH11YQ9BZA8 1340 aa16.07■□□□□ 0.16
CXCL17-201ENST00000341918 KIF24Q5T7B8 1368 aa16.07■□□□□ 0.16
CXCL17-201ENST00000341918 CICQ96RK0 1608 aaPredicted RBP16.07■□□□□ 0.16
CXCL17-201ENST00000341918 UBR3Q6ZT12 1888 aa16.07■□□□□ 0.16
CXCL17-201ENST00000341918 SMG6Q86US8 1419 aaKnown RBP16.06■□□□□ 0.16
CXCL17-201ENST00000341918 NSD3Q9BZ95 1437 aa16.06■□□□□ 0.16
CXCL17-201ENST00000341918 INSRP06213 1382 aa16.06■□□□□ 0.16
CXCL17-201ENST00000341918 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
CXCL17-201ENST00000341918 RAPGEF4Q8WZA2 1011 aa16.06■□□□□ 0.16
CXCL17-201ENST00000341918 NCAPD2Q15021 1401 aa16.05■□□□□ 0.16
CXCL17-201ENST00000341918 AMIGO3Q86WK7 504 aa16.05■□□□□ 0.16
CXCL17-201ENST00000341918 MAP2P11137 1827 aaKnown RBP16.05■□□□□ 0.16
CXCL17-201ENST00000341918 ITGB4P16144 1822 aa16.04■□□□□ 0.16
CXCL17-201ENST00000341918 FYB1O15117 783 aa16.04■□□□□ 0.16
CXCL17-201ENST00000341918 TATP17735 454 aaPredicted RBP16.04■□□□□ 0.16
CXCL17-201ENST00000341918 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
CXCL17-201ENST00000341918 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
CXCL17-201ENST00000341918 SMARCC1Q92922 1105 aaPredicted RBP16.04■□□□□ 0.16
CXCL17-201ENST00000341918 PKD1L3Q7Z443 1732 aa16.04■□□□□ 0.16
CXCL17-201ENST00000341918 IGSF1Q8N6C5 1336 aa16.03■□□□□ 0.16
CXCL17-201ENST00000341918 CYP27B1O15528 508 aa16.03■□□□□ 0.16
CXCL17-201ENST00000341918 USHBP1Q8N6Y0 703 aa16.03■□□□□ 0.16
CXCL17-201ENST00000341918 KIF3CO14782 793 aa16.02■□□□□ 0.16
CXCL17-201ENST00000341918 SSFA2P28290 1259 aa16.02■□□□□ 0.16
CXCL17-201ENST00000341918 FLT4P35916 1363 aa16.01■□□□□ 0.15
CXCL17-201ENST00000341918 NKX1-1Q15270 411 aaPredicted RBP16.01■□□□□ 0.15
CXCL17-201ENST00000341918 MPRIPQ6WCQ1 1025 aa16.01■□□□□ 0.15
CXCL17-201ENST00000341918 AK7Q96M32 723 aa16.01■□□□□ 0.15
CXCL17-201ENST00000341918 ST20-MTHFSA0A0A6YYL1 179 aa16■□□□□ 0.15
CXCL17-201ENST00000341918 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16■□□□□ 0.15
CXCL17-201ENST00000341918 HSP90AB2PQ58FF8 381 aa16■□□□□ 0.15
CXCL17-201ENST00000341918 KIF13BQ9NQT8 1826 aa16■□□□□ 0.15
CXCL17-201ENST00000341918 PIGBQ92521 554 aa15.99■□□□□ 0.15
CXCL17-201ENST00000341918 ZNF526Q8TF50 670 aaPredicted RBP15.98■□□□□ 0.15
CXCL17-201ENST00000341918 GGNBP2Q9H3C7 697 aa15.98■□□□□ 0.15
CXCL17-201ENST00000341918 KIAA1551Q9HCM1 1747 aa15.97■□□□□ 0.15
CXCL17-201ENST00000341918 LOC102724428A0A0B4J2F2 783 aa15.97■□□□□ 0.15
CXCL17-201ENST00000341918 SIK1P57059 783 aa15.97■□□□□ 0.15
CXCL17-201ENST00000341918 TONSLQ96HA7 1378 aa15.97■□□□□ 0.15
CXCL17-201ENST00000341918 PXDNLA1KZ92 1463 aa15.97■□□□□ 0.15
CXCL17-201ENST00000341918 KIF20BQ96Q89 1820 aa15.96■□□□□ 0.15
CXCL17-201ENST00000341918 LINC00116Q8NCU8 138 aa15.96■□□□□ 0.15
CXCL17-201ENST00000341918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.96■□□□□ 0.15
CXCL17-201ENST00000341918 ANKRD26Q9UPS8 1709 aa15.96■□□□□ 0.15
CXCL17-201ENST00000341918 PHF14O94880 888 aa15.95■□□□□ 0.14
CXCL17-201ENST00000341918 APLP1P51693 650 aa15.95■□□□□ 0.14
CXCL17-201ENST00000341918 DNAJC5GQ8N7S2 189 aa15.95■□□□□ 0.14
CXCL17-201ENST00000341918 PLEKHG2Q9H7P9 1386 aa15.95■□□□□ 0.14
CXCL17-201ENST00000341918 SMIM5Q71RC9 77 aa15.94■□□□□ 0.14
CXCL17-201ENST00000341918 ZNF831Q5JPB2 1677 aa15.93■□□□□ 0.14
CXCL17-201ENST00000341918 TOMM70O94826 608 aa15.93■□□□□ 0.14
CXCL17-201ENST00000341918 TGFB2P61812 414 aa15.93■□□□□ 0.14
CXCL17-201ENST00000341918 ITPK1Q13572 414 aa15.93■□□□□ 0.14
CXCL17-201ENST00000341918 C10orf71Q711Q0 1435 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms